A citation-based method for searching scientific literature

Amélie E Bigorgne, Henner F Farin, Roxane Lemoine, Nizar Mahlaoui, Nathalie Lambert, Marine Gil, Ansgar Schulz, Pierre Philippet, Patrick Schlesser, Tore G Abrahamsen, Knut Oymar, E Graham Davies, Christian Lycke Ellingsen, Emmanuelle Leteurtre, Brigitte Moreau-Massart, Dominique Berrebi, Christine Bole-Feysot, Patrick Nischke, Nicole Brousse, Alain Fischer, Hans Clevers, Geneviève de Saint Basile. J Clin Invest 2014
Times Cited: 99







List of co-cited articles
1324 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Mutations in tetratricopeptide repeat domain 7A result in a severe form of very early onset inflammatory bowel disease.
Yaron Avitzur, Conghui Guo, Lucas A Mastropaolo, Ehsan Bahrami, Hannah Chen, Zhen Zhao, Abdul Elkadri, Sandeep Dhillon, Ryan Murchie, Ramzi Fattouh,[...]. Gastroenterology 2014
112
46

Single Lgr5 stem cells build crypt-villus structures in vitro without a mesenchymal niche.
Toshiro Sato, Robert G Vries, Hugo J Snippert, Marc van de Wetering, Nick Barker, Daniel E Stange, Johan H van Es, Arie Abo, Pekka Kujala, Peter J Peters,[...]. Nature 2009
37

Whole-exome sequencing identifies tetratricopeptide repeat domain 7A (TTC7A) mutations for combined immunodeficiency with intestinal atresias.
Rui Chen, Silvia Giliani, Gaetana Lanzi, George I Mias, Silvia Lonardi, Kerry Dobbs, John Manis, Hogune Im, Jennifer E Gallagher, Douglas H Phanstiel,[...]. J Allergy Clin Immunol 2013
79
44

Long-term expansion of epithelial organoids from human colon, adenoma, adenocarcinoma, and Barrett's epithelium.
Toshiro Sato, Daniel E Stange, Marc Ferrante, Robert G J Vries, Johan H Van Es, Stieneke Van den Brink, Winan J Van Houdt, Apollo Pronk, Joost Van Gorp, Peter D Siersema,[...]. Gastroenterology 2011
34

Exome sequencing identifies mutations in the gene TTC7A in French-Canadian cases with hereditary multiple intestinal atresia.
Mark E Samuels, Jacek Majewski, Najmeh Alirezaie, Isabel Fernandez, Ferran Casals, Natalie Patey, Hélène Decaluwe, Isabelle Gosselin, Elie Haddad, Alan Hodgkinson,[...]. J Med Genet 2013
68
47

A functional CFTR assay using primary cystic fibrosis intestinal organoids.
Johanna F Dekkers, Caroline L Wiegerinck, Hugo R de Jonge, Inez Bronsveld, Hettie M Janssens, Karin M de Winter-de Groot, Arianne M Brandsma, Nienke W M de Jong, Marcel J C Bijvelds, Bob J Scholte,[...]. Nat Med 2013
522
29

Functional repair of CFTR by CRISPR/Cas9 in intestinal stem cell organoids of cystic fibrosis patients.
Gerald Schwank, Bon-Kyoung Koo, Valentina Sasselli, Johanna F Dekkers, Inha Heo, Turan Demircan, Nobuo Sasaki, Sander Boymans, Edwin Cuppen, Cornelis K van der Ent,[...]. Cell Stem Cell 2013
759
26

Immune deficiency-related enteropathy-lymphocytopenia-alopecia syndrome results from tetratricopeptide repeat domain 7A deficiency.
Roxane Lemoine, Jana Pachlopnik-Schmid, Henner F Farin, Amélie Bigorgne, Marianne Debré, Fernando Sepulveda, Sébastien Héritier, Julie Lemale, Cécile Talbotec, Frédéric Rieux-Laucat,[...]. J Allergy Clin Immunol 2014
37
64

Prospective derivation of a living organoid biobank of colorectal cancer patients.
Marc van de Wetering, Hayley E Francies, Joshua M Francis, Gergana Bounova, Francesco Iorio, Apollo Pronk, Winan van Houdt, Joost van Gorp, Amaro Taylor-Weiner, Lennart Kester,[...]. Cell 2015
24

Directed differentiation of human pluripotent stem cells into intestinal tissue in vitro.
Jason R Spence, Christopher N Mayhew, Scott A Rankin, Matthew F Kuhar, Jefferson E Vallance, Kathryn Tolle, Elizabeth E Hoskins, Vladimir V Kalinichenko, Susanne I Wells, Aaron M Zorn,[...]. Nature 2011
22

Loss of syntaxin 3 causes variant microvillus inclusion disease.
Caroline L Wiegerinck, Andreas R Janecke, Kerstin Schneeberger, Georg F Vogel, Désirée Y van Haaften-Visser, Johanna C Escher, Rüdiger Adam, Cornelia E Thöni, Kristian Pfaller, Alexander J Jordan,[...]. Gastroenterology 2014
102
22

Sequential cancer mutations in cultured human intestinal stem cells.
Jarno Drost, Richard H van Jaarsveld, Bas Ponsioen, Cheryl Zimberlin, Ruben van Boxtel, Arjan Buijs, Norman Sachs, René M Overmeer, G Johan Offerhaus, Harry Begthel,[...]. Nature 2015
517
21

Lgr5(+ve) stem cells drive self-renewal in the stomach and build long-lived gastric units in vitro.
Nick Barker, Meritxell Huch, Pekka Kujala, Marc van de Wetering, Hugo J Snippert, Johan H van Es, Toshiro Sato, Daniel E Stange, Harry Begthel, Maaike van den Born,[...]. Cell Stem Cell 2010
954
20

Functional engraftment of colon epithelium expanded in vitro from a single adult Lgr5⁺ stem cell.
Shiro Yui, Tetsuya Nakamura, Toshiro Sato, Yasuhiro Nemoto, Tomohiro Mizutani, Xiu Zheng, Shizuko Ichinose, Takashi Nagaishi, Ryuichi Okamoto, Kiichiro Tsuchiya,[...]. Nat Med 2012
454
20

In vitro expansion of single Lgr5+ liver stem cells induced by Wnt-driven regeneration.
Meritxell Huch, Craig Dorrell, Sylvia F Boj, Johan H van Es, Vivian S W Li, Marc van de Wetering, Toshiro Sato, Karien Hamer, Nobuo Sasaki, Milton J Finegold,[...]. Nature 2013
807
18

Long-term culture of genome-stable bipotent stem cells from adult human liver.
Meritxell Huch, Helmuth Gehart, Ruben van Boxtel, Karien Hamer, Francis Blokzijl, Monique M A Verstegen, Ewa Ellis, Martien van Wenum, Sabine A Fuchs, Joep de Ligt,[...]. Cell 2015
675
18

Modeling colorectal cancer using CRISPR-Cas9-mediated engineering of human intestinal organoids.
Mami Matano, Shoichi Date, Mariko Shimokawa, Ai Takano, Masayuki Fujii, Yuki Ohta, Toshiaki Watanabe, Takanori Kanai, Toshiro Sato. Nat Med 2015
556
18

The diagnostic approach to monogenic very early onset inflammatory bowel disease.
Holm H Uhlig, Tobias Schwerd, Sibylle Koletzko, Neil Shah, Jochen Kammermeier, Abdul Elkadri, Jodie Ouahed, David C Wilson, Simon P Travis, Dan Turner,[...]. Gastroenterology 2014
326
17

In vitro expansion of human gastric epithelial stem cells and their responses to bacterial infection.
Sina Bartfeld, Tülay Bayram, Marc van de Wetering, Meritxell Huch, Harry Begthel, Pekka Kujala, Robert Vries, Peter J Peters, Hans Clevers. Gastroenterology 2015
350
17

Host-microbe interactions have shaped the genetic architecture of inflammatory bowel disease.
Luke Jostins, Stephan Ripke, Rinse K Weersma, Richard H Duerr, Dermot P McGovern, Ken Y Hui, James C Lee, L Philip Schumm, Yashoda Sharma, Carl A Anderson,[...]. Nature 2012
16

Vascularized and functional human liver from an iPSC-derived organ bud transplant.
Takanori Takebe, Keisuke Sekine, Masahiro Enomura, Hiroyuki Koike, Masaki Kimura, Takunori Ogaeri, Ran-Ran Zhang, Yasuharu Ueno, Yun-Wen Zheng, Naoto Koike,[...]. Nature 2013
16

Tetratricopeptide repeat domain 7A (TTC7A) mutation in a newborn with multiple intestinal atresia and combined immunodeficiency.
Niti Sardana Agarwal, Lesley Northrop, Kwame Anyane-Yeboa, Vimla S Aggarwal, Peter L Nagy, Yesim Yilmaz Demirdag. J Clin Immunol 2014
19
84


Inflammatory bowel disease and mutations affecting the interleukin-10 receptor.
Erik-Oliver Glocker, Daniel Kotlarz, Kaan Boztug, E Michael Gertz, Alejandro A Schäffer, Fatih Noyan, Mario Perro, Jana Diestelhorst, Anna Allroth, Dhaarini Murugan,[...]. N Engl J Med 2009
908
15

Unlimited in vitro expansion of adult bi-potent pancreas progenitors through the Lgr5/R-spondin axis.
Meritxell Huch, Paola Bonfanti, Sylvia F Boj, Toshiro Sato, Cindy J M Loomans, Marc van de Wetering, Mozhdeh Sojoodi, Vivian S W Li, Jurian Schuijers, Ana Gracanin,[...]. EMBO J 2013
391
15

Cerebral organoids model human brain development and microcephaly.
Madeline A Lancaster, Magdalena Renner, Carol-Anne Martin, Daniel Wenzel, Louise S Bicknell, Matthew E Hurles, Tessa Homfray, Josef M Penninger, Andrew P Jackson, Juergen A Knoblich. Nature 2013
15

Modelling human development and disease in pluripotent stem-cell-derived gastric organoids.
Kyle W McCracken, Emily M Catá, Calyn M Crawford, Katie L Sinagoga, Michael Schumacher, Briana E Rockich, Yu-Hwai Tsai, Christopher N Mayhew, Jason R Spence, Yana Zavros,[...]. Nature 2014
486
15

Organoid models of human and mouse ductal pancreatic cancer.
Sylvia F Boj, Chang-Il Hwang, Lindsey A Baker, Iok In Christine Chio, Dannielle D Engle, Vincenzo Corbo, Myrthe Jager, Mariano Ponz-Sarvise, Hervé Tiriac, Mona S Spector,[...]. Cell 2015
908
15

Organoid cultures derived from patients with advanced prostate cancer.
Dong Gao, Ian Vela, Andrea Sboner, Phillip J Iaquinta, Wouter R Karthaus, Anuradha Gopalan, Catherine Dowling, Jackline N Wanjala, Eva A Undvall, Vivek K Arora,[...]. Cell 2014
725
14

Isolation and in vitro expansion of human colonic stem cells.
Peter Jung, Toshiro Sato, Anna Merlos-Suárez, Francisco M Barriga, Mar Iglesias, David Rossell, Herbert Auer, Mercedes Gallardo, Maria A Blasco, Elena Sancho,[...]. Nat Med 2011
422
13

Identification of stem cells in small intestine and colon by marker gene Lgr5.
Nick Barker, Johan H van Es, Jeroen Kuipers, Pekka Kujala, Maaike van den Born, Miranda Cozijnsen, Andrea Haegebarth, Jeroen Korving, Harry Begthel, Peter J Peters,[...]. Nature 2007
12

Multiple intestinal atresia with combined immune deficiency related to TTC7A defect is a multiorgan pathology: study of a French-Canadian-based cohort.
Isabel Fernandez, Natalie Patey, Valérie Marchand, Mirela Birlea, Bruno Maranda, Elie Haddad, Hélène Decaluwe, Françoise Le Deist. Medicine (Baltimore) 2014
20
60

Identification of multipotent luminal progenitor cells in human prostate organoid cultures.
Wouter R Karthaus, Phillip J Iaquinta, Jarno Drost, Ana Gracanin, Ruben van Boxtel, John Wongvipat, Catherine M Dowling, Dong Gao, Harry Begthel, Norman Sachs,[...]. Cell 2014
367
12


Stem cell transplantation for tetratricopeptide repeat domain 7A deficiency: long-term follow-up.
Jochen Kammermeier, Giovanna Lucchini, Sung-Yun Pai, Austen Worth, Dyanne Rampling, Persis Amrolia, Juliana Silva, Robert Chiesa, Kanchan Rao, Gabriele Noble-Jamieson,[...]. Blood 2016
19
63

Differentiated Troy+ chief cells act as reserve stem cells to generate all lineages of the stomach epithelium.
Daniel E Stange, Bon-Kyoung Koo, Meritxell Huch, Greg Sibbel, Onur Basak, Anna Lyubimova, Pekka Kujala, Sina Bartfeld, Jan Koster, Jessica H Geahlen,[...]. Cell 2013
312
11

An in vivo model of human small intestine using pluripotent stem cells.
Carey L Watson, Maxime M Mahe, Jorge Múnera, Jonathan C Howell, Nambirajan Sundaram, Holly M Poling, Jamie I Schweitzer, Jefferson E Vallance, Christopher N Mayhew, Ying Sun,[...]. Nat Med 2014
305
11

AUTOIMMUNE DISEASE. Patients with LRBA deficiency show CTLA4 loss and immune dysregulation responsive to abatacept therapy.
Bernice Lo, Kejian Zhang, Wei Lu, Lixin Zheng, Qian Zhang, Chrysi Kanellopoulou, Yu Zhang, Zhiduo Liu, Jill M Fritz, Rebecca Marsh,[...]. Science 2015
334
11

Characterizing responses to CFTR-modulating drugs using rectal organoids derived from subjects with cystic fibrosis.
Johanna F Dekkers, Gitte Berkers, Evelien Kruisselbrink, Annelotte Vonk, Hugo R de Jonge, Hettie M Janssens, Inez Bronsveld, Eduard A van de Graaf, Edward E S Nieuwenhuis, Roderick H J Houwen,[...]. Sci Transl Med 2016
261
11

Compound heterozygous mutations in TTC7A cause familial multiple intestinal atresias and severe combined immunodeficiency.
W Yang, P P W Lee, M-K Thong, T M Ramanujam, A Shanmugam, M-T Koh, K-W Chan, D Ying, Y Wang, J J Shen,[...]. Clin Genet 2015
17
64

Infant colitis--it's in the genes.
Erik-Oliver Glocker, Natalie Frede, Mario Perro, Neil Sebire, Mamoun Elawad, Neil Shah, Bodo Grimbacher. Lancet 2010
180
10

Assembly of the PtdIns 4-kinase Stt4 complex at the plasma membrane requires Ypp1 and Efr3.
Dan Baird, Chris Stefan, Anjon Audhya, Sabine Weys, Scott D Emr. J Cell Biol 2008
95
10

Stem cell-derived human intestinal organoids as an infection model for rotaviruses.
Stacy R Finkbeiner, Xi-Lei Zeng, Budi Utama, Robert L Atmar, Noah F Shroyer, Mary K Estes. mBio 2012
156
10

Self-organized formation of polarized cortical tissues from ESCs and its active manipulation by extrinsic signals.
Mototsugu Eiraku, Kiichi Watanabe, Mami Matsuo-Takasaki, Masako Kawada, Shigenobu Yonemura, Michiru Matsumura, Takafumi Wataya, Ayaka Nishiyama, Keiko Muguruma, Yoshiki Sasai. Cell Stem Cell 2008
775
10

Self-formation of optic cups and storable stratified neural retina from human ESCs.
Tokushige Nakano, Satoshi Ando, Nozomu Takata, Masako Kawada, Keiko Muguruma, Kiyotoshi Sekiguchi, Koichi Saito, Shigenobu Yonemura, Mototsugu Eiraku, Yoshiki Sasai. Cell Stem Cell 2012
756
10

SKIV2L mutations cause syndromic diarrhea, or trichohepatoenteric syndrome.
Alexandre Fabre, Bernard Charroux, Christine Martinez-Vinson, Bertrand Roquelaure, Egritas Odul, Ersin Sayar, Hilary Smith, Virginie Colomb, Nicolas Andre, Jean-Pierre Hugot,[...]. Am J Hum Genet 2012
87
11

Mutations in TTC37 cause trichohepatoenteric syndrome (phenotypic diarrhea of infancy).
Jane Louise Hartley, Nicholas C Zachos, Ban Dawood, Mark Donowitz, Julia Forman, Rodney J Pollitt, Neil V Morgan, Louise Tee, Paul Gissen, Walter H A Kahr,[...]. Gastroenterology 2010
78
12


Sustained in vitro intestinal epithelial culture within a Wnt-dependent stem cell niche.
Akifumi Ootani, Xingnan Li, Eugenio Sangiorgi, Quoc T Ho, Hiroo Ueno, Shuji Toda, Hajime Sugihara, Kazuma Fujimoto, Irving L Weissman, Mario R Capecchi,[...]. Nat Med 2009
522
10

In vitro generation of human pluripotent stem cell derived lung organoids.
Briana R Dye, David R Hill, Michael A H Ferguson, Yu-Hwai Tsai, Melinda S Nagy, Rachel Dyal, James M Wells, Christopher N Mayhew, Roy Nattiv, Ophir D Klein,[...]. Elife 2015
367
10


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.