A citation-based method for searching scientific literature

Crystal A Waters, Natasha T Strande, David W Wyatt, John M Pryor, Dale A Ramsden. DNA Repair (Amst) 2014
Times Cited: 85







List of co-cited articles
1080 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity



DNA repair. PAXX, a paralog of XRCC4 and XLF, interacts with Ku to promote DNA double-strand break repair.
Takashi Ochi, Andrew N Blackford, Julia Coates, Satpal Jhujh, Shahid Mehmood, Naoka Tamura, Jon Travers, Qian Wu, Viji M Draviam, Carol V Robinson,[...]. Science 2015
201
23

Interactome analysis identifies a new paralogue of XRCC4 in non-homologous end joining DNA repair pathway.
Mengtan Xing, Mingrui Yang, Wei Huo, Feng Feng, Leizhen Wei, Wenxia Jiang, Shaokai Ning, Zhenxin Yan, Wen Li, Qingsong Wang,[...]. Nat Commun 2015
121
22

A gradient of template dependence defines distinct biological roles for family X polymerases in nonhomologous end joining.
Stephanie A Nick McElhinny, Jody M Havener, Miguel Garcia-Diaz, Raquel Juárez, Katarzyna Bebenek, Barbara L Kee, Luis Blanco, Thomas A Kunkel, Dale A Ramsden. Mol Cell 2005
252
21


The fidelity of the ligation step determines how ends are resolved during nonhomologous end joining.
Crystal A Waters, Natasha T Strande, John M Pryor, Christina N Strom, Piotr Mieczkowski, Martin D Burkhalter, Sehyun Oh, Bahjat F Qaqish, Dominic T Moore, Eric A Hendrickson,[...]. Nat Commun 2014
52
30

Cernunnos/XLF promotes the ligation of mismatched and noncohesive DNA ends.
Chun J Tsai, Sunny A Kim, Gilbert Chu. Proc Natl Acad Sci U S A 2007
143
16

A human XRCC4-XLF complex bridges DNA.
Sara N Andres, Alexandra Vergnes, Dejan Ristic, Claire Wyman, Mauro Modesti, Murray Junop. Nucleic Acids Res 2012
101
15

Repair of double-strand breaks by end joining.
Kishore K Chiruvella, Zhuobin Liang, Thomas E Wilson. Cold Spring Harb Perspect Biol 2013
250
15

Essential role for polymerase specialization in cellular nonhomologous end joining.
John M Pryor, Crystal A Waters, Ana Aza, Kenjiro Asagoshi, Christina Strom, Piotr A Mieczkowski, Luis Blanco, Dale A Ramsden. Proc Natl Acad Sci U S A 2015
49
26

Is non-homologous end-joining really an inherently error-prone process?
Mireille Bétermier, Pascale Bertrand, Bernard S Lopez. PLoS Genet 2014
246
14



Non-homologous end joining: emerging themes and unanswered questions.
Sarvan Kumar Radhakrishnan, Nicholas Jette, Susan P Lees-Miller. DNA Repair (Amst) 2014
100
14

Repair of strand breaks by homologous recombination.
Maria Jasin, Rodney Rothstein. Cold Spring Harb Perspect Biol 2013
516
14

Non-homologous DNA end joining and alternative pathways to double-strand break repair.
Howard H Y Chang, Nicholas R Pannunzio, Noritaka Adachi, Michael R Lieber. Nat Rev Mol Cell Biol 2017
745
14


A biochemically defined system for mammalian nonhomologous DNA end joining.
Yunmei Ma, Haihui Lu, Brigette Tippin, Myron F Goodman, Noriko Shimazaki, Osamu Koiwai, Chih-Lin Hsieh, Klaus Schwarz, Michael R Lieber. Mol Cell 2004
262
12

Activity of DNA ligase IV stimulated by complex formation with XRCC4 protein in mammalian cells.
U Grawunder, M Wilm, X Wu, P Kulesza, T E Wilson, M Mann, M R Lieber. Nature 1997
506
12

Sustained active site rigidity during synthesis by human DNA polymerase μ.
Andrea F Moon, John M Pryor, Dale A Ramsden, Thomas A Kunkel, Katarzyna Bebenek, Lars C Pedersen. Nat Struct Mol Biol 2014
49
22

Alternative end-joining pathway(s): bricolage at DNA breaks.
Philippe Frit, Nadia Barboule, Ying Yuan, Dennis Gomez, Patrick Calsou. DNA Repair (Amst) 2014
96
12

Chromosomal translocations in human cells are generated by canonical nonhomologous end-joining.
Hind Ghezraoui, Marion Piganeau, Benjamin Renouf, Jean-Baptiste Renaud, Annahita Sallmyr, Brian Ruis, Sehyun Oh, Alan E Tomkinson, Eric A Hendrickson, Carine Giovannangeli,[...]. Mol Cell 2014
222
12

Crystal structure of human XLF: a twist in nonhomologous DNA end-joining.
Sara N Andres, Mauro Modesti, Chun J Tsai, Gilbert Chu, Murray S Junop. Mol Cell 2007
104
11


The DNA damage response: making it safe to play with knives.
Alberto Ciccia, Stephen J Elledge. Mol Cell 2010
11


Homologous-recombination-deficient tumours are dependent on Polθ-mediated repair.
Raphael Ceccaldi, Jessica C Liu, Ravindra Amunugama, Ildiko Hajdu, Benjamin Primack, Mark I R Petalcorin, Kevin W O'Connor, Panagiotis A Konstantinopoulos, Stephen J Elledge, Simon J Boulton,[...]. Nature 2015
463
11

Mammalian polymerase θ promotes alternative NHEJ and suppresses recombination.
Pedro A Mateos-Gomez, Fade Gong, Nidhi Nair, Kyle M Miller, Eros Lazzerini-Denchi, Agnel Sfeir. Nature 2015
391
11

Human CtIP promotes DNA end resection.
Alessandro A Sartori, Claudia Lukas, Julia Coates, Martin Mistrik, Shuang Fu, Jiri Bartek, Richard Baer, Jiri Lukas, Stephen P Jackson. Nature 2007
955
11


Two-Stage Synapsis of DNA Ends during Non-homologous End Joining.
Thomas G W Graham, Johannes C Walter, Joseph J Loparo. Mol Cell 2016
88
11

A noncatalytic function of the ligation complex during nonhomologous end joining.
Jessica Cottarel, Philippe Frit, Oriane Bombarde, Bernard Salles, Aurélie Négrel, Stéphanie Bernard, Penny A Jeggo, Michael R Lieber, Mauro Modesti, Patrick Calsou. J Cell Biol 2013
65
13

A pathway of double-strand break rejoining dependent upon ATM, Artemis, and proteins locating to gamma-H2AX foci.
Enriqueta Riballo, Martin Kühne, Nicole Rief, Aidan Doherty, Graeme C M Smith, María-José Recio, Caroline Reis, Kirsten Dahm, Andreas Fricke, Andrea Krempler,[...]. Mol Cell 2004
676
10

Multiplex genome engineering using CRISPR/Cas systems.
Le Cong, F Ann Ran, David Cox, Shuailiang Lin, Robert Barretto, Naomi Habib, Patrick D Hsu, Xuebing Wu, Wenyan Jiang, Luciano A Marraffini,[...]. Science 2013
10

The DNA-damage response in human biology and disease.
Stephen P Jackson, Jiri Bartek. Nature 2009
10

Cernunnos, a novel nonhomologous end-joining factor, is mutated in human immunodeficiency with microcephaly.
Dietke Buck, Laurent Malivert, Régina de Chasseval, Anne Barraud, Marie-Claude Fondanèche, Ozden Sanal, Alessandro Plebani, Jean-Louis Stéphan, Markus Hufnagel, Françoise le Deist,[...]. Cell 2006
526
10

The clinical impact of deficiency in DNA non-homologous end-joining.
Lisa Woodbine, Andrew R Gennery, Penny A Jeggo. DNA Repair (Amst) 2014
105
10

Double-strand break end resection and repair pathway choice.
Lorraine S Symington, Jean Gautier. Annu Rev Genet 2011
971
10

XLS (c9orf142) is a new component of mammalian DNA double-stranded break repair.
A Craxton, J Somers, D Munnur, R Jukes-Jones, K Cain, M Malewicz. Cell Death Differ 2015
53
16

Essential Roles for Polymerase θ-Mediated End Joining in the Repair of Chromosome Breaks.
David W Wyatt, Wanjuan Feng, Michael P Conlin, Matthew J Yousefzadeh, Steven A Roberts, Piotr Mieczkowski, Richard D Wood, Gaorav P Gupta, Dale A Ramsden. Mol Cell 2016
156
10

Mutational signatures of non-homologous and polymerase theta-mediated end-joining in embryonic stem cells.
Joost Schimmel, Hanneke Kool, Robin van Schendel, Marcel Tijsterman. EMBO J 2017
74
12

Ribonucleotide incorporation enables repair of chromosome breaks by nonhomologous end joining.
John M Pryor, Michael P Conlin, Juan Carvajal-Garcia, Megan E Luedeman, Adam J Luthman, George W Small, Dale A Ramsden. Science 2018
47
19

Ku is a 5'-dRP/AP lyase that excises nucleotide damage near broken ends.
Steven A Roberts, Natasha Strande, Martin D Burkhalter, Christina Strom, Jody M Havener, Paul Hasty, Dale A Ramsden. Nature 2010
142
9

XRCC4 protein interactions with XRCC4-like factor (XLF) create an extended grooved scaffold for DNA ligation and double strand break repair.
Michal Hammel, Martial Rey, Yaping Yu, Rajam S Mani, Scott Classen, Mona Liu, Michael E Pique, Shujuan Fang, Brandi L Mahaney, Michael Weinfeld,[...]. J Biol Chem 2011
121
9

The X family portrait: structural insights into biological functions of X family polymerases.
Andrea F Moon, Miguel Garcia-Diaz, Vinod K Batra, William A Beard, Katarzyna Bebenek, Thomas A Kunkel, Samuel H Wilson, Lars C Pedersen. DNA Repair (Amst) 2007
143
9

Requirement for XLF/Cernunnos in alignment-based gap filling by DNA polymerases lambda and mu for nonhomologous end joining in human whole-cell extracts.
Konstantin Akopiants, Rui-Zhe Zhou, Susovan Mohapatra, Kristoffer Valerie, Susan P Lees-Miller, Kyung-Jong Lee, David J Chen, Patrick Revy, Jean-Pierre de Villartay, Lawrence F Povirk. Nucleic Acids Res 2009
37
21

A structural model for regulation of NHEJ by DNA-PKcs autophosphorylation.
Tracey A Dobbs, John A Tainer, Susan P Lees-Miller. DNA Repair (Amst) 2010
154
9

DNA-PK: a dynamic enzyme in a versatile DSB repair pathway.
Anthony J Davis, Benjamin P C Chen, David J Chen. DNA Repair (Amst) 2014
220
9

Homologous recombination and human health: the roles of BRCA1, BRCA2, and associated proteins.
Rohit Prakash, Yu Zhang, Weiran Feng, Maria Jasin. Cold Spring Harb Perspect Biol 2015
449
9



Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.