A citation-based method for searching scientific literature

David Clynes, Clare Jelinska, Barbara Xella, Helena Ayyub, Stephen Taylor, Matthew Mitson, Csanád Z Bachrati, Douglas R Higgs, Richard J Gibbons. PLoS One 2014
Times Cited: 51







List of co-cited articles
567 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


ATR-X syndrome protein targets tandem repeats and influences allele-specific expression in a size-dependent manner.
Martin J Law, Karen M Lower, Hsiao P J Voon, Jim R Hughes, David Garrick, Vip Viprakasit, Matthew Mitson, Marco De Gobbi, Marco Marra, Andrew Morris,[...]. Cell 2010
251
56

Driver mutations in histone H3.3 and chromatin remodelling genes in paediatric glioblastoma.
Jeremy Schwartzentruber, Andrey Korshunov, Xiao-Yang Liu, David T W Jones, Elke Pfaff, Karine Jacob, Dominik Sturm, Adam M Fontebasso, Dong-Anh Khuong Quang, Martje Tönjes,[...]. Nature 2012
54

Daxx is an H3.3-specific histone chaperone and cooperates with ATRX in replication-independent chromatin assembly at telomeres.
Peter W Lewis, Simon J Elsaesser, Kyung-Min Noh, Sonja C Stadler, C David Allis. Proc Natl Acad Sci U S A 2010
486
54

Distinct factors control histone variant H3.3 localization at specific genomic regions.
Aaron D Goldberg, Laura A Banaszynski, Kyung-Min Noh, Peter W Lewis, Simon J Elsaesser, Sonja Stadler, Scott Dewell, Martin Law, Xingyi Guo, Xuan Li,[...]. Cell 2010
780
50

Altered telomeres in tumors with ATRX and DAXX mutations.
Christopher M Heaphy, Roeland F de Wilde, Yuchen Jiao, Alison P Klein, Barish H Edil, Chanjuan Shi, Chetan Bettegowda, Fausto J Rodriguez, Charles G Eberhart, Sachidanand Hebbar,[...]. Science 2011
623
50

The death-associated protein DAXX is a novel histone chaperone involved in the replication-independent deposition of H3.3.
Pascal Drané, Khalid Ouararhni, Arnaud Depaux, Muhammad Shuaib, Ali Hamiche. Genes Dev 2010
418
47

Suppression of the alternative lengthening of telomere pathway by the chromatin remodelling factor ATRX.
David Clynes, Clare Jelinska, Barbara Xella, Helena Ayyub, Caroline Scott, Matthew Mitson, Stephen Taylor, Douglas R Higgs, Richard J Gibbons. Nat Commun 2015
128
47

Alpha thalassemia/mental retardation syndrome X-linked gene product ATRX is required for proper replication restart and cellular resistance to replication stress.
Justin Wai-Chung Leung, Gargi Ghosal, Wenqi Wang, Xi Shen, Jiadong Wang, Lei Li, Junjie Chen. J Biol Chem 2013
52
45

Loss of ATRX, genome instability, and an altered DNA damage response are hallmarks of the alternative lengthening of telomeres pathway.
Courtney A Lovejoy, Wendi Li, Steven Reisenweber, Supawat Thongthip, Joanne Bruno, Titia de Lange, Saurav De, John H J Petrini, Patricia A Sung, Maria Jasin,[...]. PLoS Genet 2012
342
45


ATRX interacts with H3.3 in maintaining telomere structural integrity in pluripotent embryonic stem cells.
Lee H Wong, James D McGhie, Marcus Sim, Melissa A Anderson, Soyeon Ahn, Ross D Hannan, Amee J George, Kylie A Morgan, Jeffrey R Mann, K H Andy Choo. Genome Res 2010
258
37

Atrx deficiency induces telomere dysfunction, endocrine defects, and reduced life span.
L Ashley Watson, Lauren A Solomon, Jennifer Ruizhe Li, Yan Jiang, Matthew Edwards, Kazuo Shin-ya, Frank Beier, Nathalie G Bérubé. J Clin Invest 2013
56
35

Compromised genomic integrity impedes muscle growth after Atrx inactivation.
Michael S Huh, Tina Price O'Dea, Dahmane Ouazia, Bruce C McKay, Gianni Parise, Robin J Parks, Michael A Rudnicki, David J Picketts. J Clin Invest 2012
45
40

Combinatorial readout of histone H3 modifications specifies localization of ATRX to heterochromatin.
Sebastian Eustermann, Ji-Chun Yang, Martin J Law, Rachel Amos, Lynda M Chapman, Clare Jelinska, David Garrick, David Clynes, Richard J Gibbons, Daniela Rhodes,[...]. Nat Struct Mol Biol 2011
148
31

ATRX ADD domain links an atypical histone methylation recognition mechanism to human mental-retardation syndrome.
Shigeki Iwase, Bin Xiang, Sharmistha Ghosh, Ting Ren, Peter W Lewis, Jesse C Cochrane, C David Allis, David J Picketts, Dinshaw J Patel, Haitao Li,[...]. Nat Struct Mol Biol 2011
170
29

ATRX-mediated chromatin association of histone variant macroH2A1 regulates α-globin expression.
Kajan Ratnakumar, Luis F Duarte, Gary LeRoy, Dan Hasson, Daniel Smeets, Chiara Vardabasso, Clemens Bönisch, Tianying Zeng, Bin Xiang, David Y Zhang,[...]. Genes Dev 2012
83
27

The chromatin-remodeling protein ATRX is critical for neuronal survival during corticogenesis.
Nathalie G Bérubé, Marie Mangelsdorf, Magdalena Jagla, Jackie Vanderluit, David Garrick, Richard J Gibbons, Douglas R Higgs, Ruth S Slack, David J Picketts. J Clin Invest 2005
134
27

The chromatin remodeller ATRX: a repeat offender in human disease.
David Clynes, Douglas R Higgs, Richard J Gibbons. Trends Biochem Sci 2013
73
27

ATRX promotes gene expression by facilitating transcriptional elongation through guanine-rich coding regions.
Michael A Levy, Kristin D Kernohan, Yan Jiang, Nathalie G Bérubé. Hum Mol Genet 2015
41
34

ATRX Plays a Key Role in Maintaining Silencing at Interstitial Heterochromatic Loci and Imprinted Genes.
Hsiao P J Voon, Jim R Hughes, Christina Rode, Inti A De La Rosa-Velázquez, Thomas Jenuwein, Robert Feil, Douglas R Higgs, Richard J Gibbons. Cell Rep 2015
86
27

DAXX/ATRX, MEN1, and mTOR pathway genes are frequently altered in pancreatic neuroendocrine tumors.
Yuchen Jiao, Chanjuan Shi, Barish H Edil, Roeland F de Wilde, David S Klimstra, Anirban Maitra, Richard D Schulick, Laura H Tang, Christopher L Wolfgang, Michael A Choti,[...]. Science 2011
25

Frequent ATRX, CIC, FUBP1 and IDH1 mutations refine the classification of malignant gliomas.
Yuchen Jiao, Patrick J Killela, Zachary J Reitman, Ahmed B Rasheed, Christopher M Heaphy, Roeland F de Wilde, Fausto J Rodriguez, Sergio Rosemberg, Sueli Mieko Oba-Shinjo, Suely Kazue Nagahashi Marie,[...]. Oncotarget 2012
381
25

ATRX directs binding of PRC2 to Xist RNA and Polycomb targets.
Kavitha Sarma, Catherine Cifuentes-Rojas, Ayla Ergun, Amanda Del Rosario, Yesu Jeon, Forest White, Ruslan Sadreyev, Jeannie T Lee. Cell 2014
133
25

The ATRX syndrome protein forms a chromatin-remodeling complex with Daxx and localizes in promyelocytic leukemia nuclear bodies.
Yutong Xue, Richard Gibbons, Zhijiang Yan, Dafeng Yang, Tarra L McDowell, Salvatore Sechi, Jun Qin, Sharleen Zhou, Doug Higgs, Weidong Wang. Proc Natl Acad Sci U S A 2003
257
25

Alternative lengthening of telomeres renders cancer cells hypersensitive to ATR inhibitors.
Rachel Litman Flynn, Kelli E Cox, Maya Jeitany, Hiroaki Wakimoto, Alysia R Bryll, Neil J Ganem, Francesca Bersani, Jose R Pineda, Mario L Suvà, Cyril H Benes,[...]. Science 2015
241
23

Histone H3.3 is required for endogenous retroviral element silencing in embryonic stem cells.
Simon J Elsässer, Kyung-Min Noh, Nichole Diaz, C David Allis, Laura A Banaszynski. Nature 2015
180
23

The Daxx/Atrx Complex Protects Tandem Repetitive Elements during DNA Hypomethylation by Promoting H3K9 Trimethylation.
Quanyuan He, Hyeung Kim, Rui Huang, Weisi Lu, Mengfan Tang, Fengtao Shi, Dong Yang, Xiya Zhang, Junjiu Huang, Dan Liu,[...]. Cell Stem Cell 2015
63
23

Localization of a putative transcriptional regulator (ATRX) at pericentromeric heterochromatin and the short arms of acrocentric chromosomes.
T L McDowell, R J Gibbons, H Sutherland, D M O'Rourke, W A Bickmore, A Pombo, H Turley, K Gatter, D J Picketts, V J Buckle,[...]. Proc Natl Acad Sci U S A 1999
177
21

Loss of ATRX leads to chromosome cohesion and congression defects.
Kieran Ritchie, Claudia Seah, Jana Moulin, Christian Isaac, Frederick Dick, Nathalie G Bérubé. J Cell Biol 2008
105
21


ATRX loss promotes tumor growth and impairs nonhomologous end joining DNA repair in glioma.
Carl Koschmann, Anda-Alexandra Calinescu, Felipe J Nunez, Alan Mackay, Janet Fazal-Salom, Daniel Thomas, Flor Mendez, Neha Kamran, Marta Dzaman, Lakshman Mulpuri,[...]. Sci Transl Med 2016
121
21

Stalled replication forks within heterochromatin require ATRX for protection.
M S Huh, D Ivanochko, L E Hashem, M Curtin, M Delorme, E Goodall, K Yan, D J Picketts. Cell Death Dis 2016
38
28

The chromatin remodelling factor ATRX suppresses R-loops in transcribed telomeric repeats.
Diu Tt Nguyen, Hsiao Phin J Voon, Barbara Xella, Caroline Scott, David Clynes, Christian Babbs, Helena Ayyub, Jon Kerry, Jacqueline A Sharpe, Jackie A Sloane-Stanley,[...]. EMBO Rep 2017
44
25

ATRX and the replication of structured DNA.
David Clynes, Richard J Gibbons. Curr Opin Genet Dev 2013
33
30

Frequent ATRX mutations and loss of expression in adult diffuse astrocytic tumors carrying IDH1/IDH2 and TP53 mutations.
Xiao-Yang Liu, Noha Gerges, Andrey Korshunov, Nesrin Sabha, Dong-Anh Khuong-Quang, Adam M Fontebasso, Adam Fleming, Djihad Hadjadj, Jeremy Schwartzentruber, Jacek Majewski,[...]. Acta Neuropathol 2012
244
19

Rapid induction of alternative lengthening of telomeres by depletion of the histone chaperone ASF1.
Roderick J O'Sullivan, Nausica Arnoult, Daniel H Lackner, Liana Oganesian, Candy Haggblom, Armelle Corpet, Genevieve Almouzni, Jan Karlseder. Nat Struct Mol Biol 2014
144
19

A novel transcription regulatory complex containing death domain-associated protein and the ATR-X syndrome protein.
Jun Tang, Shaobo Wu, Hongtu Liu, Rachael Stratt, Orr G Barak, Ramin Shiekhattar, David J Picketts, Xiaolu Yang. J Biol Chem 2004
133
19

Atrx promotes heterochromatin formation at retrotransposons.
Dennis Sadic, Katharina Schmidt, Sophia Groh, Ivan Kondofersky, Joachim Ellwart, Christiane Fuchs, Fabian J Theis, Gunnar Schotta. EMBO Rep 2015
64
19

ATRX represses alternative lengthening of telomeres.
Christine E Napier, Lily I Huschtscha, Adam Harvey, Kylie Bower, Jane R Noble, Eric A Hendrickson, Roger R Reddel. Oncotarget 2015
79
19

ATRX and DAXX: Mechanisms and Mutations.
Michael A Dyer, Zulekha A Qadeer, David Valle-Garcia, Emily Bernstein. Cold Spring Harb Perspect Med 2017
57
19

Mutations in the chromatin-associated protein ATRX.
Richard J Gibbons, Takahito Wada, Christopher A Fisher, Nicola Malik, Matthew J Mitson, David P Steensma, Alan Fryer, David R Goudie, Ian D Krantz, Joanne Traeger-Synodinos. Hum Mutat 2008
103
17

Whole-exome sequencing identifies ATRX mutation as a key molecular determinant in lower-grade glioma.
Kasthuri Kannan, Akiko Inagaki, Joachim Silber, Daniel Gorovets, Jianan Zhang, Edward R Kastenhuber, Adriana Heguy, John H Petrini, Timothy A Chan, Jason T Huse. Oncotarget 2012
173
17

Prevalence of the alternative lengthening of telomeres telomere maintenance mechanism in human cancer subtypes.
Christopher M Heaphy, Andrea P Subhawong, Seung-Mo Hong, Michael G Goggins, Elizabeth A Montgomery, Edward Gabrielson, George J Netto, Jonathan I Epstein, Tamara L Lotan, William H Westra,[...]. Am J Pathol 2011
279
17

ATRX encodes a novel member of the SNF2 family of proteins: mutations point to a common mechanism underlying the ATR-X syndrome.
D J Picketts, D R Higgs, S Bachoo, D J Blake, O W Quarrell, R J Gibbons. Hum Mol Genet 1996
180
17

Inhibition of PRC2 activity by a gain-of-function H3 mutation found in pediatric glioblastoma.
Peter W Lewis, Manuel M Müller, Matthew S Koletsky, Francisco Cordero, Shu Lin, Laura A Banaszynski, Benjamin A Garcia, Tom W Muir, Oren J Becher, C David Allis. Science 2013
695
15

Defective survival of proliferating Sertoli cells and androgen receptor function in a mouse model of the ATR-X syndrome.
Stefan Bagheri-Fam, Anthony Argentaro, Terje Svingen, Alexander N Combes, Andrew H Sinclair, Peter Koopman, Vincent R Harley. Hum Mol Genet 2011
43
18

Mutations in ATRX, encoding a SWI/SNF-like protein, cause diverse changes in the pattern of DNA methylation.
R J Gibbons, T L McDowell, S Raman, D M O'Rourke, D Garrick, H Ayyub, D R Higgs. Nat Genet 2000
364
15

Sequencing of neuroblastoma identifies chromothripsis and defects in neuritogenesis genes.
Jan J Molenaar, Jan Koster, Danny A Zwijnenburg, Peter van Sluis, Linda J Valentijn, Ida van der Ploeg, Mohamed Hamdi, Johan van Nes, Bart A Westerman, Jennemiek van Arkel,[...]. Nature 2012
554
15




Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.