A citation-based method for searching scientific literature

Christoph Leidig, Matthias Thoms, Iris Holdermann, Bettina Bradatsch, Otto Berninghausen, Gert Bange, Irmgard Sinning, Ed Hurt, Roland Beckmann. Nat Commun 2014
Times Cited: 96







List of co-cited articles
1118 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Ribosome biogenesis in the yeast Saccharomyces cerevisiae.
John L Woolford, Susan J Baserga. Genetics 2013
468
51

Diverse roles of assembly factors revealed by structures of late nuclear pre-60S ribosomes.
Shan Wu, Beril Tutuncuoglu, Kaige Yan, Hailey Brown, Yixiao Zhang, Dan Tan, Michael Gamalinda, Yi Yuan, Zhifei Li, Jelena Jakovljevic,[...]. Nature 2016
125
51

The structure of the eukaryotic ribosome at 3.0 Å resolution.
Adam Ben-Shem, Nicolas Garreau de Loubresse, Sergey Melnikov, Lasse Jenner, Gulnara Yusupova, Marat Yusupov. Science 2011
763
44

Coupled GTPase and remodelling ATPase activities form a checkpoint for ribosome export.
Yoshitaka Matsuo, Sander Granneman, Matthias Thoms, Rizos-Georgios Manikas, David Tollervey, Ed Hurt. Nature 2014
96
41

Structure of the pre-60S ribosomal subunit with nuclear export factor Arx1 bound at the exit tunnel.
Bettina Bradatsch, Christoph Leidig, Sander Granneman, Marén Gnädig, David Tollervey, Bettina Böttcher, Roland Beckmann, Ed Hurt. Nat Struct Mol Biol 2012
87
45

Architecture of the Rix1-Rea1 checkpoint machinery during pre-60S-ribosome remodeling.
Clara Barrio-Garcia, Matthias Thoms, Dirk Flemming, Lukas Kater, Otto Berninghausen, Jochen Baßler, Roland Beckmann, Ed Hurt. Nat Struct Mol Biol 2016
73
49

A hierarchical model for assembly of eukaryotic 60S ribosomal subunit domains.
Michael Gamalinda, Uli Ohmayer, Jelena Jakovljevic, Beril Kumcuoglu, Joshua Woolford, Bertrade Mbom, Lawrence Lin, John L Woolford. Genes Dev 2014
87
39

Assembly factors Rpf2 and Rrs1 recruit 5S rRNA and ribosomal proteins rpL5 and rpL11 into nascent ribosomes.
Jingyu Zhang, Piyanun Harnpicharnchai, Jelena Jakovljevic, Lan Tang, Yurong Guo, Marlene Oeffinger, Michael P Rout, Shawna L Hiley, Timothy Hughes, John L Woolford. Genes Dev 2007
149
34

The AAA-ATPase Rea1 drives removal of biogenesis factors during multiple stages of 60S ribosome assembly.
Jochen Bassler, Martina Kallas, Brigitte Pertschy, Cornelia Ulbrich, Matthias Thoms, Ed Hurt. Mol Cell 2010
87
36

UCSF Chimera--a visualization system for exploratory research and analysis.
Eric F Pettersen, Thomas D Goddard, Conrad C Huang, Gregory S Couch, Daniel M Greenblatt, Elaine C Meng, Thomas E Ferrin. J Comput Chem 2004
33

Defining the pathway of cytoplasmic maturation of the 60S ribosomal subunit.
Kai-Yin Lo, Zhihua Li, Cyril Bussiere, Stefan Bresson, Edward M Marcotte, Arlen W Johnson. Mol Cell 2010
139
31

Mechanism of eIF6 release from the nascent 60S ribosomal subunit.
Félix Weis, Emmanuel Giudice, Mark Churcher, Li Jin, Christine Hilcenko, Chi C Wong, David Traynor, Robert R Kay, Alan J Warren. Nat Struct Mol Biol 2015
113
31


Insertion of the Biogenesis Factor Rei1 Probes the Ribosomal Tunnel during 60S Maturation.
Basil Johannes Greber, Stefan Gerhardy, Alexander Leitner, Marc Leibundgut, Michèle Salem, Daniel Boehringer, Nicolas Leulliot, Ruedi Aebersold, Vikram Govind Panse, Nenad Ban. Cell 2016
73
39

Chaperoning 5S RNA assembly.
Clément Madru, Simon Lebaron, Magali Blaud, Lila Delbos, Juliana Pipoli, Eric Pasmant, Stéphane Réty, Nicolas Leulliot. Genes Dev 2015
41
68

Mechanochemical removal of ribosome biogenesis factors from nascent 60S ribosomal subunits.
Cornelia Ulbrich, Meikel Diepholz, Jochen Bassler, Dieter Kressler, Brigitte Pertschy, Kyriaki Galani, Bettina Böttcher, Ed Hurt. Cell 2009
110
28

Functions of ribosomal proteins in assembly of eukaryotic ribosomes in vivo.
Jesus de la Cruz, Katrin Karbstein, John L Woolford. Annu Rev Biochem 2015
199
28

Architecture of the 90S Pre-ribosome: A Structural View on the Birth of the Eukaryotic Ribosome.
Markus Kornprobst, Martin Turk, Nikola Kellner, Jingdong Cheng, Dirk Flemming, Isabelle Koš-Braun, Martin Koš, Matthias Thoms, Otto Berninghausen, Roland Beckmann,[...]. Cell 2016
137
27

Cryo-EM structures of Arx1 and maturation factors Rei1 and Jjj1 bound to the 60S ribosomal subunit.
Basil J Greber, Daniel Boehringer, Christian Montellese, Nenad Ban. Nat Struct Mol Biol 2012
76
32

Visualizing the Assembly Pathway of Nucleolar Pre-60S Ribosomes.
Lukas Kater, Matthias Thoms, Clara Barrio-Garcia, Jingdong Cheng, Sherif Ismail, Yasar Luqman Ahmed, Gert Bange, Dieter Kressler, Otto Berninghausen, Irmgard Sinning,[...]. Cell 2017
91
27

Driving ribosome assembly.
Dieter Kressler, Ed Hurt, Jochen Bassler. Biochim Biophys Acta 2010
348
25

Synchronizing nuclear import of ribosomal proteins with ribosome assembly.
Dieter Kressler, Gert Bange, Yutaka Ogawa, Goran Stjepanovic, Bettina Bradatsch, Dagmar Pratte, Stefan Amlacher, Daniela Strauß, Yoshihiro Yoneda, Jun Katahira,[...]. Science 2012
78
30

A network of assembly factors is involved in remodeling rRNA elements during preribosome maturation.
Jochen Baßler, Helge Paternoga, Iris Holdermann, Matthias Thoms, Sander Granneman, Clara Barrio-Garcia, Afua Nyarko, Woonghee Lee, Gunter Stier, Sarah A Clark,[...]. J Cell Biol 2014
39
58

Crystal structure of the eukaryotic 60S ribosomal subunit in complex with initiation factor 6.
Sebastian Klinge, Felix Voigts-Hoffmann, Marc Leibundgut, Sofia Arpagaus, Nenad Ban. Science 2011
253
22

Hierarchical recruitment into nascent ribosomes of assembly factors required for 27SB pre-rRNA processing in Saccharomyces cerevisiae.
Jason Talkish, Jingyu Zhang, Jelena Jakovljevic, Edward W Horsey, John L Woolford. Nucleic Acids Res 2012
49
44

The Exosome Is Recruited to RNA Substrates through Specific Adaptor Proteins.
Matthias Thoms, Emma Thomson, Jochen Baßler, Marén Gnädig, Sabine Griesel, Ed Hurt. Cell 2015
125
22

A translation-like cycle is a quality control checkpoint for maturing 40S ribosome subunits.
Bethany S Strunk, Megan N Novak, Crystal L Young, Katrin Karbstein. Cell 2012
185
21

90S pre-ribosomes include the 35S pre-rRNA, the U3 snoRNP, and 40S subunit processing factors but predominantly lack 60S synthesis factors.
Paola Grandi, Vladimir Rybin, Jochen Bassler, Elisabeth Petfalski, Daniela Strauss, Martina Marzioch, Thorsten Schäfer, Bernhard Kuster, Herbert Tschochner, David Tollervey,[...]. Mol Cell 2002
377
21

A new system for naming ribosomal proteins.
Nenad Ban, Roland Beckmann, Jamie H D Cate, Jonathan D Dinman, François Dragon, Steven R Ellis, Denis L J Lafontaine, Lasse Lindahl, Anders Liljas, Jeffrey M Lipton,[...]. Curr Opin Struct Biol 2014
353
21

Structural snapshot of cytoplasmic pre-60S ribosomal particles bound by Nmd3, Lsg1, Tif6 and Reh1.
Chengying Ma, Shan Wu, Ningning Li, Yan Chen, Kaige Yan, Zhifei Li, Lvqin Zheng, Jianlin Lei, John L Woolford, Ning Gao. Nat Struct Mol Biol 2017
59
35

The post-transcriptional steps of eukaryotic ribosome biogenesis.
A K Henras, J Soudet, M Gérus, S Lebaron, M Caizergues-Ferrer, A Mougin, Y Henry. Cell Mol Life Sci 2008
415
20

A large nucleolar U3 ribonucleoprotein required for 18S ribosomal RNA biogenesis.
François Dragon, Jennifer E G Gallagher, Patricia A Compagnone-Post, Brianna M Mitchell, Kara A Porwancher, Karen A Wehner, Steven Wormsley, Robert E Settlage, Jeffrey Shabanowitz, Yvonne Osheim,[...]. Nature 2002
532
20

One core, two shells: bacterial and eukaryotic ribosomes.
Sergey Melnikov, Adam Ben-Shem, Nicolas Garreau de Loubresse, Lasse Jenner, Gulnara Yusupova, Marat Yusupov. Nat Struct Mol Biol 2012
241
20

Assembly of Saccharomyces cerevisiae 60S ribosomal subunits: role of factors required for 27S pre-rRNA processing.
Aarti Sahasranaman, Jill Dembowski, John Strahler, Philip Andrews, Janine Maddock, John L Woolford. EMBO J 2011
71
28

Modular assembly of the nucleolar pre-60S ribosomal subunit.
Zahra Assur Sanghai, Linamarie Miller, Kelly R Molloy, Jonas Barandun, Mirjam Hunziker, Malik Chaker-Margot, Junjie Wang, Brian T Chait, Sebastian Klinge. Nature 2018
72
27

Proofreading of pre-40S ribosome maturation by a translation initiation factor and 60S subunits.
Simon Lebaron, Claudia Schneider, Robert W van Nues, Agata Swiatkowska, Dietrich Walsh, Bettina Böttcher, Sander Granneman, Nicholas J Watkins, David Tollervey. Nat Struct Mol Biol 2012
134
19

PHENIX: a comprehensive Python-based system for macromolecular structure solution.
Paul D Adams, Pavel V Afonine, Gábor Bunkóczi, Vincent B Chen, Ian W Davis, Nathaniel Echols, Jeffrey J Headd, Li-Wei Hung, Gary J Kapral, Ralf W Grosse-Kunstleve,[...]. Acta Crystallogr D Biol Crystallogr 2010
19

Rlp24 activates the AAA-ATPase Drg1 to initiate cytoplasmic pre-60S maturation.
Lisa Kappel, Mathias Loibl, Gertrude Zisser, Isabella Klein, Gernot Fruhmann, Christof Gruber, Stefan Unterweger, Gerald Rechberger, Brigitte Pertschy, Helmut Bergler. J Cell Biol 2012
46
41

The structure of Rpf2-Rrs1 explains its role in ribosome biogenesis.
Satyavati Kharde, Fabiola R Calviño, Andrea Gumiero, Klemens Wild, Irmgard Sinning. Nucleic Acids Res 2015
36
52

The economics of ribosome biosynthesis in yeast.
J R Warner. Trends Biochem Sci 1999
18

Sequential protein association with nascent 60S ribosomal particles.
Cosmin Saveanu, Abdelkader Namane, Pierre-Emmanuel Gleizes, Alice Lebreton, Jean-Claude Rousselle, Jacqueline Noaillac-Depeyre, Nicole Gas, Alain Jacquier, Micheline Fromont-Racine. Mol Cell Biol 2003
162
18

Maturation of eukaryotic ribosomes: acquisition of functionality.
Vikram Govind Panse, Arlen W Johnson. Trends Biochem Sci 2010
147
18

Stage-specific assembly events of the 6-MDa small-subunit processome initiate eukaryotic ribosome biogenesis.
Malik Chaker-Margot, Mirjam Hunziker, Jonas Barandun, Brian D Dill, Sebastian Klinge. Nat Struct Mol Biol 2015
79
22

Molecular architecture of the 90S small subunit pre-ribosome.
Qi Sun, Xing Zhu, Jia Qi, Weidong An, Pengfei Lan, Dan Tan, Rongchang Chen, Bing Wang, Sanduo Zheng, Cheng Zhang,[...]. Elife 2017
100
18

Ribosome assembly factors prevent premature translation initiation by 40S assembly intermediates.
Bethany S Strunk, Cherisse R Loucks, Min Su, Harish Vashisth, Shanshan Cheng, Justin Schilling, Charles L Brooks, Katrin Karbstein, Georgios Skiniotis. Science 2011
161
17

Studies on the assembly characteristics of large subunit ribosomal proteins in S. cerevisae.
Uli Ohmayer, Michael Gamalinda, Martina Sauert, Julius Ossowski, Gisela Pöll, Jan Linnemann, Thomas Hierlmeier, Jorge Perez-Fernandez, Beril Kumcuoglu, Isabelle Leger-Silvestre,[...]. PLoS One 2013
42
40

60S pre-ribosome formation viewed from assembly in the nucleolus until export to the cytoplasm.
Tracy A Nissan, Jochen Bassler, Elisabeth Petfalski, David Tollervey, Ed Hurt. EMBO J 2002
285
17

Processing of preribosomal RNA in Saccharomyces cerevisiae.
Antonio Fernández-Pevida, Dieter Kressler, Jesús de la Cruz. Wiley Interdiscip Rev RNA 2015
61
27

Symportin 1 chaperones 5S RNP assembly during ribosome biogenesis by occupying an essential rRNA-binding site.
Fabiola R Calviño, Satyavati Kharde, Alessandro Ori, Astrid Hendricks, Klemens Wild, Dieter Kressler, Gert Bange, Ed Hurt, Martin Beck, Irmgard Sinning. Nat Commun 2015
37
45

Structural and functional analysis of the Rpf2-Rrs1 complex in ribosome biogenesis.
Nozomi Asano, Koji Kato, Akiyoshi Nakamura, Keisuke Komoda, Isao Tanaka, Min Yao. Nucleic Acids Res 2015
31
54


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.