A citation-based method for searching scientific literature

Thomas J Nicholls, Michal Minczuk. Exp Gerontol 2014
Times Cited: 108







List of co-cited articles
1074 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Sequence and organization of the human mitochondrial genome.
S Anderson, A T Bankier, B G Barrell, M H de Bruijn, A R Coulson, J Drouin, I C Eperon, D P Nierlich, B A Roe, F Sanger,[...]. Nature 1981
22

Maintenance and Expression of Mammalian Mitochondrial DNA.
Claes M Gustafsson, Maria Falkenberg, Nils-Göran Larsson. Annu Rev Biochem 2016
243
22

In vivo occupancy of mitochondrial single-stranded DNA binding protein supports the strand displacement mode of DNA replication.
Javier Miralles Fusté, Yonghong Shi, Sjoerd Wanrooij, Xuefeng Zhu, Elisabeth Jemt, Örjan Persson, Nasim Sabouri, Claes M Gustafsson, Maria Falkenberg. PLoS Genet 2014
76
23

Premature ageing in mice expressing defective mitochondrial DNA polymerase.
Aleksandra Trifunovic, Anna Wredenberg, Maria Falkenberg, Johannes N Spelbrink, Anja T Rovio, Carl E Bruder, Mohammad Bohlooly-Y, Sebastian Gidlöf, Anders Oldfors, Rolf Wibom,[...]. Nature 2004
17

Super-resolution microscopy reveals that mammalian mitochondrial nucleoids have a uniform size and frequently contain a single copy of mtDNA.
Christian Kukat, Christian A Wurm, Henrik Spåhr, Maria Falkenberg, Nils-Göran Larsson, Stefan Jakobs. Proc Natl Acad Sci U S A 2011
281
17

Mitochondrial biology. Replication-transcription switch in human mitochondria.
Karen Agaronyan, Yaroslav I Morozov, Michael Anikin, Dmitry Temiakov. Science 2015
92
16

Mitochondrial DNA replication proceeds via a 'bootlace' mechanism involving the incorporation of processed transcripts.
Aurelio Reyes, Lawrence Kazak, Stuart R Wood, Takehiro Yasukawa, Howard T Jacobs, Ian J Holt. Nucleic Acids Res 2013
69
20

Mitochondrial DNA genetics and the heteroplasmy conundrum in evolution and disease.
Douglas C Wallace, Dimitra Chalkia. Cold Spring Harb Perspect Biol 2013
320
14

Mitochondrial RNA polymerase is needed for activation of the origin of light-strand DNA replication.
Javier Miralles Fusté, Sjoerd Wanrooij, Elisabeth Jemt, Caroline E Granycome, Tricia J Cluett, Yonghong Shi, Neli Atanassova, Ian J Holt, Claes M Gustafsson, Maria Falkenberg. Mol Cell 2010
117
14

Replication of vertebrate mitochondrial DNA entails transient ribonucleotide incorporation throughout the lagging strand.
Takehiro Yasukawa, Aurelio Reyes, Tricia J Cluett, Ming-Yao Yang, Mark Bowmaker, Howard T Jacobs, Ian J Holt. EMBO J 2006
151
14

Regulation of DNA replication at the end of the mitochondrial D-loop involves the helicase TWINKLE and a conserved sequence element.
Elisabeth Jemt, Örjan Persson, Yonghong Shi, Majda Mehmedovic, Jay P Uhler, Marcela Dávila López, Christoph Freyer, Claes M Gustafsson, Tore Samuelsson, Maria Falkenberg. Nucleic Acids Res 2015
42
30



Loss-of-function mutations in MGME1 impair mtDNA replication and cause multisystemic mitochondrial disease.
Cornelia Kornblum, Thomas J Nicholls, Tobias B Haack, Susanne Schöler, Viktoriya Peeva, Katharina Danhauser, Kerstin Hallmann, Gábor Zsurka, Joanna Rorbach, Arcangela Iuso,[...]. Nat Genet 2013
128
12

Primer retention owing to the absence of RNase H1 is catastrophic for mitochondrial DNA replication.
J Bradley Holmes, Gokhan Akman, Stuart R Wood, Kiran Sakhuja, Susana M Cerritelli, Chloe Moss, Mark R Bowmaker, Howard T Jacobs, Robert J Crouch, Ian J Holt. Proc Natl Acad Sci U S A 2015
49
22

Human mitochondrial RNA polymerase primes lagging-strand DNA synthesis in vitro.
Sjoerd Wanrooij, Javier Miralles Fusté, Géraldine Farge, Yonghong Shi, Claes M Gustafsson, Maria Falkenberg. Proc Natl Acad Sci U S A 2008
113
11

Mitochondria and cancer.
Douglas C Wallace. Nat Rev Cancer 2012
10

A novel closed-circular mitochondrial DNA with properties of a replicating intermediate.
H Kasamatsu, D L Robberson, J Vinograd. Proc Natl Acad Sci U S A 1971
267
10

DNA methyltransferase 1, cytosine methylation, and cytosine hydroxymethylation in mammalian mitochondria.
Lisa S Shock, Prashant V Thakkar, Erica J Peterson, Richard G Moran, Shirley M Taylor. Proc Natl Acad Sci U S A 2011
312
10


Cross-strand binding of TFAM to a single mtDNA molecule forms the mitochondrial nucleoid.
Christian Kukat, Karen M Davies, Christian A Wurm, Henrik Spåhr, Nina A Bonekamp, Inge Kühl, Friederike Joos, Paola Loguercio Polosa, Chan Bae Park, Viktor Posse,[...]. Proc Natl Acad Sci U S A 2015
156
10

Human mitochondrial DNA deletions associated with mutations in the gene encoding Twinkle, a phage T7 gene 4-like protein localized in mitochondria.
J N Spelbrink, F Y Li, V Tiranti, K Nikali, Q P Yuan, M Tariq, S Wanrooij, N Garrido, G Comi, L Morandi,[...]. Nat Genet 2001
601
10



TEFM (c17orf42) is necessary for transcription of human mtDNA.
Michal Minczuk, Jiuya He, Anna M Duch, Thijs J Ettema, Aleksander Chlebowski, Karol Dzionek, Leo G J Nijtmans, Martijn A Huynen, Ian J Holt. Nucleic Acids Res 2011
96
9

Mitochondrial transcription factors B1 and B2 activate transcription of human mtDNA.
Maria Falkenberg, Martina Gaspari, Anja Rantanen, Aleksandra Trifunovic, Nils-Göran Larsson, Claes M Gustafsson. Nat Genet 2002
412
9

DNA replication and transcription in mammalian mitochondria.
Maria Falkenberg, Nils-Göran Larsson, Claes M Gustafsson. Annu Rev Biochem 2007
439
9


Heteroplasmic mitochondrial DNA mutations in normal and tumour cells.
Yiping He, Jian Wu, Devin C Dressman, Christine Iacobuzio-Donahue, Sanford D Markowitz, Victor E Velculescu, Luis A Diaz, Kenneth W Kinzler, Bert Vogelstein, Nickolas Papadopoulos. Nature 2010
365
9

A hybrid G-quadruplex structure formed between RNA and DNA explains the extraordinary stability of the mitochondrial R-loop.
Paulina H Wanrooij, Jay P Uhler, Yonghong Shi, Fredrik Westerlund, Maria Falkenberg, Claes M Gustafsson. Nucleic Acids Res 2012
89
10

Linear mtDNA fragments and unusual mtDNA rearrangements associated with pathological deficiency of MGME1 exonuclease.
Thomas J Nicholls, Gábor Zsurka, Viktoriya Peeva, Susanne Schöler, Roman J Szczesny, Dominik Cysewski, Aurelio Reyes, Cornelia Kornblum, Monica Sciacco, Maurizio Moggio,[...]. Hum Mol Genet 2014
38
23

Somatic mitochondrial DNA mutations in mammalian aging.
Nils-Göran Larsson. Annu Rev Biochem 2010
310
9

A bidirectional origin of replication maps to the major noncoding region of human mitochondrial DNA.
Takehiro Yasukawa, Ming-Yao Yang, Howard T Jacobs, Ian J Holt. Mol Cell 2005
120
9

TWINKLE is an essential mitochondrial helicase required for synthesis of nascent D-loop strands and complete mtDNA replication.
Dusanka Milenkovic, Stanka Matic, Inge Kühl, Benedetta Ruzzenente, Christoph Freyer, Elisabeth Jemt, Chan Bae Park, Maria Falkenberg, Nils-Göran Larsson. Hum Mol Genet 2013
94
9

Origins and functional consequences of somatic mitochondrial DNA mutations in human cancer.
Young Seok Ju, Ludmil B Alexandrov, Moritz Gerstung, Inigo Martincorena, Serena Nik-Zainal, Manasa Ramakrishna, Helen R Davies, Elli Papaemmanuil, Gunes Gundem, Adam Shlien,[...]. Elife 2014
198
9

Reconstitution of a minimal mtDNA replisome in vitro.
Jenny A Korhonen, Xuan Hoi Pham, Mina Pellegrini, Maria Falkenberg. EMBO J 2004
247
9

Failure to produce mitochondrial DNA results in embryonic lethality in Rnaseh1 null mice.
Susana M Cerritelli, Ella G Frolova, Chiguang Feng, Alexander Grinberg, Paul E Love, Robert J Crouch. Mol Cell 2003
220
9

MitoCarta2.0: an updated inventory of mammalian mitochondrial proteins.
Sarah E Calvo, Karl R Clauser, Vamsi K Mootha. Nucleic Acids Res 2016
710
9

Mitochondrial DNA Depletion in Respiratory Chain-Deficient Parkinson Disease Neurons.
Anne Grünewald, Karolina A Rygiel, Philippa D Hepplewhite, Christopher M Morris, Martin Picard, Doug M Turnbull. Ann Neurol 2016
105
9

Human mitochondrial DNA replication machinery and disease.
Matthew J Young, William C Copeland. Curr Opin Genet Dev 2016
100
9


High levels of mitochondrial DNA deletions in substantia nigra neurons in aging and Parkinson disease.
Andreas Bender, Kim J Krishnan, Christopher M Morris, Geoffrey A Taylor, Amy K Reeve, Robert H Perry, Evelyn Jaros, Joshua S Hersheson, Joanne Betts, Thomas Klopstock,[...]. Nat Genet 2006
959
8

In vivo mutagenesis reveals that OriL is essential for mitochondrial DNA replication.
Sjoerd Wanrooij, Javier Miralles Fusté, James B Stewart, Paulina H Wanrooij, Tore Samuelsson, Nils-Göran Larsson, Claes M Gustafsson, Maria Falkenberg. EMBO Rep 2012
41
19

Human mitochondrial transcription revisited: only TFAM and TFB2M are required for transcription of the mitochondrial genes in vitro.
Dmitry Litonin, Marina Sologub, Yonghong Shi, Maria Savkina, Michael Anikin, Maria Falkenberg, Claes M Gustafsson, Dmitry Temiakov. J Biol Chem 2010
121
8

The control region of mitochondrial DNA shows an unusual CpG and non-CpG methylation pattern.
Dina Bellizzi, Patrizia D'Aquila, Teresa Scafone, Marco Giordano, Vincenzo Riso, Andrea Riccio, Giuseppe Passarino. DNA Res 2013
148
8

Human mitochondrial DNA replication.
Ian J Holt, Aurelio Reyes. Cold Spring Harb Perspect Biol 2012
89
8

Conserved sequence box II directs transcription termination and primer formation in mitochondria.
Xuan Hoi Pham, Géraldine Farge, Yonghong Shi, Martina Gaspari, Claes M Gustafsson, Maria Falkenberg. J Biol Chem 2006
89
8



The exonuclease activity of DNA polymerase γ is required for ligation during mitochondrial DNA replication.
Bertil Macao, Jay P Uhler, Triinu Siibak, Xuefeng Zhu, Yonghong Shi, Wenwen Sheng, Monica Olsson, James B Stewart, Claes M Gustafsson, Maria Falkenberg. Nat Commun 2015
37
21


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.