A citation-based method for searching scientific literature

Kaoru Okamoto Yoshiyama, Kengo Sakaguchi, Seisuke Kimura. Biology (Basel) 2013
Times Cited: 80







List of co-cited articles
799 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


ATR and ATM play both distinct and additive roles in response to ionizing radiation.
Kevin M Culligan, Clare E Robertson, Julia Foreman, Peter Doerner, Anne B Britt. Plant J 2006
226
32

Suppressor of gamma response 1 (SOG1) encodes a putative transcription factor governing multiple responses to DNA damage.
Kaoru Yoshiyama, Phillip A Conklin, Neil D Huefner, Anne B Britt. Proc Natl Acad Sci U S A 2009
163
31

ATM-mediated phosphorylation of SOG1 is essential for the DNA damage response in Arabidopsis.
Kaoru O Yoshiyama, Junya Kobayashi, Nobuo Ogita, Minako Ueda, Seisuke Kimura, Hisaji Maki, Masaaki Umeda. EMBO Rep 2013
95
23

Programmed induction of endoreduplication by DNA double-strand breaks in Arabidopsis.
Sumiko Adachi, Kazunori Minamisawa, Yoko Okushima, Soichi Inagaki, Kaoru Yoshiyama, Youichi Kondou, Eli Kaminuma, Mika Kawashima, Tetsuro Toyoda, Minami Matsui,[...]. Proc Natl Acad Sci U S A 2011
179
23

DNA damage and repair in plants - from models to crops.
Vasilissa Manova, Damian Gruszka. Front Plant Sci 2015
132
23

ATR regulates a G2-phase cell-cycle checkpoint in Arabidopsis thaliana.
Kevin Culligan, Alain Tissier, Anne Britt. Plant Cell 2004
197
22

Mechanisms Used by Plants to Cope with DNA Damage.
Zhubing Hu, Toon Cools, Lieven De Veylder. Annu Rev Plant Biol 2016
125
22

Identifying the target genes of SUPPRESSOR OF GAMMA RESPONSE 1, a master transcription factor controlling DNA damage response in Arabidopsis.
Nobuo Ogita, Yoko Okushima, Mutsutomo Tokizawa, Yoshiharu Y Yamamoto, Maho Tanaka, Motoaki Seki, Yuko Makita, Minami Matsui, Kaoru Okamoto-Yoshiyama, Tomoaki Sakamoto,[...]. Plant J 2018
69
24

Hypersensitivity to DNA damage in plant stem cell niches.
Nick Fulcher, Robert Sablowski. Proc Natl Acad Sci U S A 2009
165
20

Repairing breaks in the plant genome: the importance of keeping it together.
Wanda M Waterworth, Georgina E Drury, Clifford M Bray, Christopher E West. New Phytol 2011
105
18

AtATM is essential for meiosis and the somatic response to DNA damage in plants.
Valérie Garcia, Hugues Bruchet, Delphine Camescasse, Fabienne Granier, David Bouchez, Alain Tissier. Plant Cell 2003
201
18

The Arabidopsis SIAMESE-RELATED cyclin-dependent kinase inhibitors SMR5 and SMR7 regulate the DNA damage checkpoint in response to reactive oxygen species.
Dalong Yi, Claire Lessa Alvim Kamei, Toon Cools, Sandy Vanderauwera, Naoki Takahashi, Yoko Okushima, Thomas Eekhout, Kaoru Okamoto Yoshiyama, John Larkin, Hilde Van den Daele,[...]. Plant Cell 2014
105
18

The role of SOG1, a plant-specific transcriptional regulator, in the DNA damage response.
Kaoru O Yoshiyama, Seisuke Kimura, Hisaji Maki, Anne B Britt, Masaaki Umeda. Plant Signal Behav 2014
49
28

Arabidopsis WEE1 kinase controls cell cycle arrest in response to activation of the DNA integrity checkpoint.
Kristof De Schutter, Jérôme Joubès, Toon Cools, Aurine Verkest, Florence Corellou, Elena Babiychuk, Els Van Der Schueren, Tom Beeckman, Sergeï Kushnir, Dirk Inzé,[...]. Plant Cell 2007
199
17



SOG1 activator and MYB3R repressors regulate a complex DNA damage network in Arabidopsis.
Clara Bourbousse, Neeraja Vegesna, Julie A Law. Proc Natl Acad Sci U S A 2018
57
21

The plant-specific CDKB1-CYCB1 complex mediates homologous recombination repair in Arabidopsis.
Annika K Weimer, Sascha Biedermann, Hirofumi Harashima, Farshad Roodbarkelari, Naoki Takahashi, Julia Foreman, Yonsheng Guan, Gaëtan Pochon, Maren Heese, Daniël Van Damme,[...]. EMBO J 2016
65
16


A shared DNA-damage-response pathway for induction of stem-cell death by UVB and by gamma irradiation.
T Furukawa, M J Curtis, C M Tominey, Y H Duong, B W L Wilcox, D Aggoune, J B Hays, A B Britt. DNA Repair (Amst) 2010
95
12




The DNA damage response: making it safe to play with knives.
Alberto Ciccia, Stephen J Elledge. Mol Cell 2010
11

The retinoblastoma homolog RBR1 mediates localization of the repair protein RAD51 to DNA lesions in Arabidopsis.
Sascha Biedermann, Hirofumi Harashima, Poyu Chen, Maren Heese, Daniel Bouyer, Kostika Sofroni, Arp Schnittger. EMBO J 2017
44
20

Integrating plant and animal biology for the search of novel DNA damage biomarkers.
Zacharenia Nikitaki, Marcela Holá, Mattia Donà, Athanasia Pavlopoulou, Ioannis Michalopoulos, Karel J Angelis, Alexandros G Georgakilas, Anca Macovei, Alma Balestrazzi. Mutat Res Rev Mutat Res 2018
16
56

Genotoxic stress in plants: shedding light on DNA damage, repair and DNA repair helicases.
Narendra Tuteja, Parvaiz Ahmad, Brahma B Panda, Renu Tuteja. Mutat Res 2009
98
10


Kinetic analysis of DNA double-strand break repair pathways in Arabidopsis.
Cyril Charbonnel, Elisabeth Allain, Maria Eugenia Gallego, Charles I White. DNA Repair (Amst) 2011
71
11

Epigenetic regulation, somatic homologous recombination, and abscisic acid signaling are influenced by DNA polymerase epsilon mutation in Arabidopsis.
Haibo Yin, Xia Zhang, Jun Liu, Youqun Wang, Junna He, Tao Yang, Xuhui Hong, Qing Yang, Zhizhong Gong. Plant Cell 2009
88
10

Deficiency of the Arabidopsis helicase RTEL1 triggers a SOG1-dependent replication checkpoint in response to DNA cross-links.
Zhubing Hu, Toon Cools, Pooneh Kalhorzadeh, Jefri Heyman, Lieven De Veylder. Plant Cell 2015
32
25



DNA damage checkpoint kinase ATM regulates germination and maintains genome stability in seeds.
Wanda M Waterworth, Steven Footitt, Clifford M Bray, William E Finch-Savage, Christopher E West. Proc Natl Acad Sci U S A 2016
55
14

DNA damage sensing by the ATM and ATR kinases.
Alexandre Maréchal, Lee Zou. Cold Spring Harb Perspect Biol 2013
736
10


Distinct roles of the ATR kinase and the Mre11-Rad50-Nbs1 complex in the maintenance of chromosomal stability in Arabidopsis.
Simon Amiard, Cyril Charbonnel, Elisabeth Allain, Annie Depeiges, Charles I White, Maria Eugenia Gallego. Plant Cell 2010
70
10

Genotoxic stress and DNA repair in plants: emerging functions and tools for improving crop productivity.
Alma Balestrazzi, Massimo Confalonieri, Anca Macovei, Mattia Donà, Daniela Carbonera. Plant Cell Rep 2011
48
14

DNA stress checkpoint control and plant development.
Toon Cools, Lieven De Veylder. Curr Opin Plant Biol 2009
75
9

The Arabidopsis thaliana checkpoint kinase WEE1 protects against premature vascular differentiation during replication stress.
Toon Cools, Anelia Iantcheva, Annika K Weimer, Shannah Boens, Naoki Takahashi, Sara Maes, Hilde Van den Daele, Gert Van Isterdael, Arp Schnittger, Lieven De Veylder. Plant Cell 2011
65
10

The Arabidopsis SWR1 chromatin-remodeling complex is important for DNA repair, somatic recombination, and meiosis.
Marisa Rosa, Mona Von Harder, Riccardo Aiese Cigliano, Peter Schlögelhofer, Ortrun Mittelsten Scheid. Plant Cell 2013
75
9

The Rad17 homologue of Arabidopsis is involved in the regulation of DNA damage repair and homologous recombination.
Fabian Heitzeberg, I-Peng Chen, Frank Hartung, Nadiya Orel, Karel J Angelis, Holger Puchta. Plant J 2004
64
10

Arabidopsis RETINOBLASTOMA RELATED directly regulates DNA damage responses through functions beyond cell cycle control.
Beatrix M Horvath, Hana Kourova, Szilvia Nagy, Edit Nemeth, Zoltan Magyar, Csaba Papdi, Zaki Ahmad, Gabino F Sanchez-Perez, Serena Perilli, Ikram Blilou,[...]. EMBO J 2017
54
12

DNA Damage Repair in the Context of Plant Chromatin.
Mattia Donà, Ortrun Mittelsten Scheid. Plant Physiol 2015
39
17

Quantitative phosphoproteomics of the ataxia telangiectasia-mutated (ATM) and ataxia telangiectasia-mutated and rad3-related (ATR) dependent DNA damage response in Arabidopsis thaliana.
Elisabeth Roitinger, Manuel Hofer, Thomas Köcher, Peter Pichler, Maria Novatchkova, Jianhua Yang, Peter Schlögelhofer, Karl Mechtler. Mol Cell Proteomics 2015
128
8

SOG1: a master regulator of the DNA damage response in plants.
Kaoru Okamoto Yoshiyama. Genes Genet Syst 2016
45
15

Participation of chromatin-remodeling proteins in the repair of ultraviolet-B-damaged DNA.
Mabel Campi, Lucio D'Andrea, Julia Emiliani, Paula Casati. Plant Physiol 2012
44
13

Molecular mechanisms of ultraviolet radiation-induced DNA damage and repair.
Rajesh P Rastogi, Richa, Ashok Kumar, Madhu B Tyagi, Rajeshwar P Sinha. J Nucleic Acids 2010
491
7

Molecular mechanisms of mammalian DNA repair and the DNA damage checkpoints.
Aziz Sancar, Laura A Lindsey-Boltz, Keziban Unsal-Kaçmaz, Stuart Linn. Annu Rev Biochem 2004
7



Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.