A citation-based method for searching scientific literature

Stephanie C Y Yu, K C Allen Chan, Yama W L Zheng, Peiyong Jiang, Gary J W Liao, Hao Sun, Ranjit Akolekar, Tak Y Leung, Attie T J I Go, John M G van Vugt, Ryoko Minekawa, Cees B M Oudejans, Kypros H Nicolaides, Rossa W K Chiu, Y M Dennis Lo. Proc Natl Acad Sci U S A 2014
Times Cited: 172







List of co-cited articles
810 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Maternal plasma DNA sequencing reveals the genome-wide genetic and mutational profile of the fetus.
Y M Dennis Lo, K C Allen Chan, Hao Sun, Eric Z Chen, Peiyong Jiang, Fiona M F Lun, Yama W Zheng, Tak Y Leung, Tze K Lau, Charles R Cantor,[...]. Sci Transl Med 2010
618
54

Presence of fetal DNA in maternal plasma and serum.
Y M Lo, N Corbetta, P F Chamberlain, V Rai, I L Sargent, C W Redman, J S Wainscoat. Lancet 1997
43

Cell-free DNA Comprises an In Vivo Nucleosome Footprint that Informs Its Tissues-Of-Origin.
Matthew W Snyder, Martin Kircher, Andrew J Hill, Riza M Daza, Jay Shendure. Cell 2016
600
30

Size distributions of maternal and fetal DNA in maternal plasma.
K C Allen Chan, Jun Zhang, Angela B Y Hui, Nathalie Wong, Tze K Lau, Tse N Leung, Kwok-Wai Lo, Dolly W S Huang, Y M Dennis Lo. Clin Chem 2004
393
30

Determination of fetal DNA fraction from the plasma of pregnant women using sequence read counts.
Sung K Kim, Gregory Hannum, Jennifer Geis, John Tynan, Grant Hogg, Chen Zhao, Taylor J Jensen, Amin R Mazloom, Paul Oeth, Mathias Ehrich,[...]. Prenat Diagn 2015
119
27

Noninvasive prenatal diagnosis of fetal chromosomal aneuploidy by massively parallel genomic sequencing of DNA in maternal plasma.
Rossa W K Chiu, K C Allen Chan, Yuan Gao, Virginia Y M Lau, Wenli Zheng, Tak Y Leung, Chris H F Foo, Bin Xie, Nancy B Y Tsui, Fiona M F Lun,[...]. Proc Natl Acad Sci U S A 2008
580
27

Plasma DNA tissue mapping by genome-wide methylation sequencing for noninvasive prenatal, cancer, and transplantation assessments.
Kun Sun, Peiyong Jiang, K C Allen Chan, John Wong, Yvonne K Y Cheng, Raymond H S Liang, Wai-kong Chan, Edmond S K Ma, Stephen L Chan, Suk Hang Cheng,[...]. Proc Natl Acad Sci U S A 2015
347
26

Lengthening and shortening of plasma DNA in hepatocellular carcinoma patients.
Peiyong Jiang, Carol W M Chan, K C Allen Chan, Suk Hang Cheng, John Wong, Vincent Wai-Sun Wong, Grace L H Wong, Stephen L Chan, Tony S K Mok, Henry L Y Chan,[...]. Proc Natl Acad Sci U S A 2015
362
26

Noninvasive diagnosis of fetal aneuploidy by shotgun sequencing DNA from maternal blood.
H Christina Fan, Yair J Blumenfeld, Usha Chitkara, Louanne Hudgins, Stephen R Quake. Proc Natl Acad Sci U S A 2008
678
25

Calculating the fetal fraction for noninvasive prenatal testing based on genome-wide nucleosome profiles.
Roy Straver, Cees B M Oudejans, Erik A Sistermans, Marcel J T Reinders. Prenat Diagn 2016
54
44

Size-tagged preferred ends in maternal plasma DNA shed light on the production mechanism and show utility in noninvasive prenatal testing.
Kun Sun, Peiyong Jiang, Ada I C Wong, Yvonne K Y Cheng, Suk Hang Cheng, Haiqiang Zhang, K C Allen Chan, Tak Y Leung, Rossa W K Chiu, Y M Dennis Lo. Proc Natl Acad Sci U S A 2018
69
34

Fragment Length of Circulating Tumor DNA.
Hunter R Underhill, Jacob O Kitzman, Sabine Hellwig, Noah C Welker, Riza Daza, Daniel N Baker, Keith M Gligorich, Robert C Rostomily, Mary P Bronner, Jay Shendure. PLoS Genet 2016
331
23

The impact of maternal plasma DNA fetal fraction on next generation sequencing tests for common fetal aneuploidies.
Jacob A Canick, Glenn E Palomaki, Edward M Kloza, Geralyn M Lambert-Messerlian, James E Haddow. Prenat Diagn 2013
213
23

DNA fragments in the blood plasma of cancer patients: quantitations and evidence for their origin from apoptotic and necrotic cells.
S Jahr, H Hentze, S Englisch, D Hardt, F O Fackelmayer, R D Hesch, R Knippers. Cancer Res 2001
20

Enhanced detection of circulating tumor DNA by fragment size analysis.
Florent Mouliere, Dineika Chandrananda, Anna M Piskorz, Elizabeth K Moore, James Morris, Lise Barlebo Ahlborn, Richard Mair, Teodora Goranova, Francesco Marass, Katrin Heider,[...]. Sci Transl Med 2018
336
20

Non-invasive prenatal assessment of trisomy 21 by multiplexed maternal plasma DNA sequencing: large scale validity study.
Rossa W K Chiu, Ranjit Akolekar, Yama W L Zheng, Tak Y Leung, Hao Sun, K C Allen Chan, Fiona M F Lun, Attie T J I Go, Elizabeth T Lau, William W K To,[...]. BMJ 2011
486
19

DNA sequencing of maternal plasma to detect Down syndrome: an international clinical validation study.
Glenn E Palomaki, Edward M Kloza, Geralyn M Lambert-Messerlian, James E Haddow, Louis M Neveux, Mathias Ehrich, Dirk van den Boom, Allan T Bombard, Cosmin Deciu, Wayne W Grody,[...]. Genet Med 2011
591
18

Fetal fraction in maternal plasma cell-free DNA at 11-13 weeks' gestation: relation to maternal and fetal characteristics.
G Ashoor, A Syngelaki, L C Y Poon, J C Rezende, K H Nicolaides. Ultrasound Obstet Gynecol 2013
217
18

Analysis of the size distributions of fetal and maternal cell-free DNA by paired-end sequencing.
H Christina Fan, Yair J Blumenfeld, Usha Chitkara, Louanne Hudgins, Stephen R Quake. Clin Chem 2010
163
18

Detection and localization of surgically resectable cancers with a multi-analyte blood test.
Joshua D Cohen, Lu Li, Yuxuan Wang, Christopher Thoburn, Bahman Afsari, Ludmila Danilova, Christopher Douville, Ammar A Javed, Fay Wong, Austin Mattox,[...]. Science 2018
16

Noninvasive prenatal screening for fetal aneuploidy, 2016 update: a position statement of the American College of Medical Genetics and Genomics.
Anthony R Gregg, Brian G Skotko, Judith L Benkendorf, Kristin G Monaghan, Komal Bajaj, Robert G Best, Susan Klugman, Michael S Watson. Genet Med 2016
337
16

High fragmentation characterizes tumour-derived circulating DNA.
Florent Mouliere, Bruno Robert, Erika Arnau Peyrotte, Maguy Del Rio, Marc Ychou, Franck Molina, Celine Gongora, Alain R Thierry. PLoS One 2011
306
15

Second generation noninvasive fetal genome analysis reveals de novo mutations, single-base parental inheritance, and preferred DNA ends.
K C Allen Chan, Peiyong Jiang, Kun Sun, Yvonne K Y Cheng, Yu K Tong, Suk Hang Cheng, Ada I C Wong, Irena Hudecova, Tak Y Leung, Rossa W K Chiu,[...]. Proc Natl Acad Sci U S A 2016
85
17

Quantification of fetal DNA by use of methylation-based DNA discrimination.
Anders O H Nygren, Jarrod Dean, Taylor J Jensen, Selena Kruse, William Kwong, Dirk van den Boom, Mathias Ehrich. Clin Chem 2010
91
16

Nonhematopoietically derived DNA is shorter than hematopoietically derived DNA in plasma: a transplantation model.
Yama W L Zheng, K C Allen Chan, Hao Sun, Peiyong Jiang, Xiaoxi Su, Eric Z Chen, Fiona M F Lun, Emily C W Hung, Vincent Lee, John Wong,[...]. Clin Chem 2012
81
18

Cell-free DNA analysis for noninvasive examination of trisomy.
Mary E Norton, Bo Jacobsson, Geeta K Swamy, Louise C Laurent, Angela C Ranzini, Herb Brar, Mark W Tomlinson, Leonardo Pereira, Jean L Spitz, Desiree Hollemon,[...]. N Engl J Med 2015
413
15

Analysis of Plasma Epstein-Barr Virus DNA to Screen for Nasopharyngeal Cancer.
K C Allen Chan, John K S Woo, Ann King, Benny C Y Zee, W K Jacky Lam, Stephen L Chan, Sam W I Chu, Constance Mak, Irene O L Tse, Samantha Y M Leung,[...]. N Engl J Med 2017
310
14

Gestational age and maternal weight effects on fetal cell-free DNA in maternal plasma.
Eric Wang, Annette Batey, Craig Struble, Thomas Musci, Ken Song, Arnold Oliphant. Prenat Diagn 2013
229
14

Microfluidics digital PCR reveals a higher than expected fraction of fetal DNA in maternal plasma.
Fiona M F Lun, Rossa W K Chiu, K C Allen Chan, Tak Yeung Leung, Tze Kin Lau, Y M Dennis Lo. Clin Chem 2008
298
14

Orientation-aware plasma cell-free DNA fragmentation analysis in open chromatin regions informs tissue of origin.
Kun Sun, Peiyong Jiang, Suk Hang Cheng, Timothy H T Cheng, John Wong, Vincent W S Wong, Simon S M Ng, Brigette B Y Ma, Tak Y Leung, Stephen L Chan,[...]. Genome Res 2019
82
17

Quantitative analysis of fetal DNA in maternal plasma and serum: implications for noninvasive prenatal diagnosis.
Y M Lo, M S Tein, T K Lau, C J Haines, T N Leung, P M Poon, J S Wainscoat, P J Johnson, A M Chang, N M Hjelm. Am J Hum Genet 1998
13



Detection of circulating tumor DNA in early- and late-stage human malignancies.
Chetan Bettegowda, Mark Sausen, Rebecca J Leary, Isaac Kinde, Yuxuan Wang, Nishant Agrawal, Bjarne R Bartlett, Hao Wang, Brandon Luber, Rhoda M Alani,[...]. Sci Transl Med 2014
12

Noninvasive identification and monitoring of cancer mutations by targeted deep sequencing of plasma DNA.
Tim Forshew, Muhammed Murtaza, Christine Parkinson, Davina Gale, Dana W Y Tsui, Fiona Kaper, Sarah-Jane Dawson, Anna M Piskorz, Mercedes Jimenez-Linan, David Bentley,[...]. Sci Transl Med 2012
819
12

Origins, structures, and functions of circulating DNA in oncology.
A R Thierry, S El Messaoudi, P B Gahan, P Anker, M Stroun. Cancer Metastasis Rev 2016
351
12

High-resolution profiling of fetal DNA clearance from maternal plasma by massively parallel sequencing.
Stephanie C Y Yu, Shara W Y Lee, Peiyong Jiang, Tak Y Leung, K C Allen Chan, Rossa W K Chiu, Y M Dennis Lo. Clin Chem 2013
136
12

Plasma DNA aberrations in systemic lupus erythematosus revealed by genomic and methylomic sequencing.
Rebecca W Y Chan, Peiyong Jiang, Xianlu Peng, Lai-Shan Tam, Gary J W Liao, Edmund K M Li, Priscilla C H Wong, Hao Sun, K C Allen Chan, Rossa W K Chiu,[...]. Proc Natl Acad Sci U S A 2014
69
17

Dnase1l3 deletion causes aberrations in length and end-motif frequencies in plasma DNA.
Lee Serpas, Rebecca W Y Chan, Peiyong Jiang, Meng Ni, Kun Sun, Ali Rashidfarrokhi, Chetna Soni, Vanja Sisirak, Wing-Shan Lee, Suk Hang Cheng,[...]. Proc Natl Acad Sci U S A 2019
67
17

Noninvasive prenatal methylomic analysis by genomewide bisulfite sequencing of maternal plasma DNA.
Fiona M F Lun, Rossa W K Chiu, Kun Sun, Tak Y Leung, Peiyong Jiang, K C Allen Chan, Hao Sun, Y M Dennis Lo. Clin Chem 2013
95
11

Hypermethylated RASSF1A in maternal plasma: A universal fetal DNA marker that improves the reliability of noninvasive prenatal diagnosis.
K C Allen Chan, Chunming Ding, Ageliki Gerovassili, Sze W Yeung, Rossa W K Chiu, Tse N Leung, Tze K Lau, Stephen S C Chim, Grace T Y Chung, Kypros H Nicolaides,[...]. Clin Chem 2006
258
11

Rapid clearance of fetal DNA from maternal plasma.
Y M Lo, J Zhang, T N Leung, T K Lau, A M Chang, N M Hjelm. Am J Hum Genet 1999
735
11

Noninvasive detection of cancer-associated genome-wide hypomethylation and copy number aberrations by plasma DNA bisulfite sequencing.
K C Allen Chan, Peiyong Jiang, Carol W M Chan, Kun Sun, John Wong, Edwin P Hui, Stephen L Chan, Wing Cheong Chan, David S C Hui, Simon S M Ng,[...]. Proc Natl Acad Sci U S A 2013
236
11

Liquid biopsies come of age: towards implementation of circulating tumour DNA.
Jonathan C M Wan, Charles Massie, Javier Garcia-Corbacho, Florent Mouliere, James D Brenton, Carlos Caldas, Simon Pacey, Richard Baird, Nitzan Rosenfeld. Nat Rev Cancer 2017
11

Comparing methods for fetal fraction determination and quality control of NIPT samples.
Daphne M van Beek, Roy Straver, Marian M Weiss, Elles M J Boon, Karin Huijsdens-van Amsterdam, Cees B M Oudejans, Marcel J T Reinders, Erik A Sistermans. Prenat Diagn 2017
33
33

Detection and quantification of mutations in the plasma of patients with colorectal tumors.
Frank Diehl, Meng Li, Devin Dressman, Yiping He, Dong Shen, Steve Szabo, Luis A Diaz, Steven N Goodman, Kerstin A David, Hartmut Juhl,[...]. Proc Natl Acad Sci U S A 2005
774
11

High-resolution characterization of sequence signatures due to non-random cleavage of cell-free DNA.
Dineika Chandrananda, Natalie P Thorne, Melanie Bahlo. BMC Med Genomics 2015
70
15

Factors affecting levels of circulating cell-free fetal DNA in maternal plasma and their implications for noninvasive prenatal testing.
Sarah L Kinnings, Jennifer A Geis, Eyad Almasri, Huiquan Wang, Xiaojun Guan, Ron M McCullough, Allan T Bombard, Juan-Sebastian Saldivar, Paul Oeth, Cosmin Deciu. Prenat Diagn 2015
65
16

COFFEE: control-free noninvasive fetal chromosomal examination using maternal plasma DNA.
Kun Sun, K C Allen Chan, Irena Hudecova, Rossa W K Chiu, Y M Dennis Lo, Peiyong Jiang. Prenat Diagn 2017
11
90

Identification of tissue-specific cell death using methylation patterns of circulating DNA.
Roni Lehmann-Werman, Daniel Neiman, Hai Zemmour, Joshua Moss, Judith Magenheim, Adi Vaknin-Dembinsky, Sten Rubertsson, Bengt NellgĂ„rd, Kaj Blennow, Henrik Zetterberg,[...]. Proc Natl Acad Sci U S A 2016
314
10


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.