A citation-based method for searching scientific literature

Jonathan T Ting, Tanya L Daigle, Qian Chen, Guoping Feng. Methods Mol Biol 2014
Times Cited: 325







List of co-cited articles
523 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Preparation of Acute Brain Slices Using an Optimized N-Methyl-D-glucamine Protective Recovery Method.
Jonathan T Ting, Brian R Lee, Peter Chong, Gilberto Soler-Llavina, Charles Cobbs, Christof Koch, Hongkui Zeng, Ed Lein. J Vis Exp 2018
84
15

A robust and high-throughput Cre reporting and characterization system for the whole mouse brain.
Linda Madisen, Theresa A Zwingman, Susan M Sunkin, Seung Wook Oh, Hatim A Zariwala, Hong Gu, Lydia L Ng, Richard D Palmiter, Michael J Hawrylycz, Allan R Jones,[...]. Nat Neurosci 2010
8


STAR: ultrafast universal RNA-seq aligner.
Alexander Dobin, Carrie A Davis, Felix Schlesinger, Jorg Drenkow, Chris Zaleski, Sonali Jha, Philippe Batut, Mark Chaisson, Thomas R Gingeras. Bioinformatics 2013
7

Brain structure. Cell types in the mouse cortex and hippocampus revealed by single-cell RNA-seq.
Amit Zeisel, Ana B Muñoz-Manchado, Simone Codeluppi, Peter Lönnerberg, Gioele La Manno, Anna Juréus, Sueli Marques, Hermany Munguba, Liqun He, Christer Betsholtz,[...]. Science 2015
6

Classification of electrophysiological and morphological neuron types in the mouse visual cortex.
Nathan W Gouwens, Staci A Sorensen, Jim Berg, Changkyu Lee, Tim Jarsky, Jonathan Ting, Susan M Sunkin, David Feng, Costas A Anastassiou, Eliza Barkan,[...]. Nat Neurosci 2019
129
6

Evolving the lock to fit the key to create a family of G protein-coupled receptors potently activated by an inert ligand.
Blaine N Armbruster, Xiang Li, Mark H Pausch, Stefan Herlitze, Bryan L Roth. Proc Natl Acad Sci U S A 2007
6

Ultrasensitive fluorescent proteins for imaging neuronal activity.
Tsai-Wen Chen, Trevor J Wardill, Yi Sun, Stefan R Pulver, Sabine L Renninger, Amy Baohan, Eric R Schreiter, Rex A Kerr, Michael B Orger, Vivek Jayaraman,[...]. Nature 2013
6


Sleep Promotes Downward Firing Rate Homeostasis.
Alejandro Torrado Pacheco, Juliet Bottorff, Ya Gao, Gina G Turrigiano. Neuron 2021
21
23

Shared and distinct transcriptomic cell types across neocortical areas.
Bosiljka Tasic, Zizhen Yao, Lucas T Graybuck, Kimberly A Smith, Thuc Nghi Nguyen, Darren Bertagnolli, Jeff Goldy, Emma Garren, Michael N Economo, Sarada Viswanathan,[...]. Nature 2018
542
5

Adult mouse cortical cell taxonomy revealed by single cell transcriptomics.
Bosiljka Tasic, Vilas Menon, Thuc Nghi Nguyen, Tae Kyung Kim, Tim Jarsky, Zizhen Yao, Boaz Levi, Lucas T Gray, Staci A Sorensen, Tim Dolbeare,[...]. Nat Neurosci 2016
800
5

Fiji: an open-source platform for biological-image analysis.
Johannes Schindelin, Ignacio Arganda-Carreras, Erwin Frise, Verena Kaynig, Mark Longair, Tobias Pietzsch, Stephan Preibisch, Curtis Rueden, Stephan Saalfeld, Benjamin Schmid,[...]. Nat Methods 2012
5

Homeostatic plasticity in the developing nervous system.
Gina G Turrigiano, Sacha B Nelson. Nat Rev Neurosci 2004
5

Plasticity in the intrinsic excitability of cortical pyramidal neurons.
N S Desai, L C Rutherford, G G Turrigiano. Nat Neurosci 1999
496
4

Critical role of soluble amyloid-β for early hippocampal hyperactivity in a mouse model of Alzheimer's disease.
Marc Aurel Busche, Xiaowei Chen, Horst A Henning, Julia Reichwald, Matthias Staufenbiel, Bert Sakmann, Arthur Konnerth. Proc Natl Acad Sci U S A 2012
361
4

A toolbox of Cre-dependent optogenetic transgenic mice for light-induced activation and silencing.
Linda Madisen, Tianyi Mao, Henner Koch, Jia-min Zhuo, Antal Berenyi, Shigeyoshi Fujisawa, Yun-Wei A Hsu, Alfredo J Garcia, Xuan Gu, Sebastien Zanella,[...]. Nat Neurosci 2012
750
4

Neuronal Firing Rate Homeostasis Is Inhibited by Sleep and Promoted by Wake.
Keith B Hengen, Alejandro Torrado Pacheco, James N McGregor, Stephen D Van Hooser, Gina G Turrigiano. Cell 2016
138
4

Molecular Architecture of the Mouse Nervous System.
Amit Zeisel, Hannah Hochgerner, Peter Lönnerberg, Anna Johnsson, Fatima Memic, Job van der Zwan, Martin Häring, Emelie Braun, Lars E Borm, Gioele La Manno,[...]. Cell 2018
885
4

Molecular Diversity and Specializations among the Cells of the Adult Mouse Brain.
Arpiar Saunders, Evan Z Macosko, Alec Wysoker, Melissa Goldman, Fenna M Krienen, Heather de Rivera, Elizabeth Bien, Matthew Baum, Laura Bortolin, Shuyu Wang,[...]. Cell 2018
542
4


Sensory experience inversely regulates feedforward and feedback excitation-inhibition ratio in rodent visual cortex.
Nathaniel J Miska, Leonidas Ma Richter, Brian A Cary, Julijana Gjorgjieva, Gina G Turrigiano. Elife 2018
23
17

An energy budget for signaling in the grey matter of the brain.
D Attwell, S B Laughlin. J Cereb Blood Flow Metab 2001
4

Single-cell analysis of experience-dependent transcriptomic states in the mouse visual cortex.
Sinisa Hrvatin, Daniel R Hochbaum, M Aurel Nagy, Marcelo Cicconet, Keiramarie Robertson, Lucas Cheadle, Rapolas Zilionis, Alex Ratner, Rebeca Borges-Monroy, Allon M Klein,[...]. Nat Neurosci 2018
200
4


A resource of Cre driver lines for genetic targeting of GABAergic neurons in cerebral cortex.
Hiroki Taniguchi, Miao He, Priscilla Wu, Sangyong Kim, Raehum Paik, Ken Sugino, Duda Kvitsiani, Yu Fu, Jiangteng Lu, Ying Lin,[...]. Neuron 2011
4

Integrated Morphoelectric and Transcriptomic Classification of Cortical GABAergic Cells.
Nathan W Gouwens, Staci A Sorensen, Fahimeh Baftizadeh, Agata Budzillo, Brian R Lee, Tim Jarsky, Lauren Alfiler, Katherine Baker, Eliza Barkan, Kyla Berry,[...]. Cell 2020
77
5

A Designer AAV Variant Permits Efficient Retrograde Access to Projection Neurons.
D Gowanlock R Tervo, Bum-Yeol Hwang, Sarada Viswanathan, Thomas Gaj, Maria Lavzin, Kimberly D Ritola, Sarah Lindo, Susan Michael, Elena Kuleshova, David Ojala,[...]. Neuron 2016
525
4

Specialized Subpopulations of Deep-Layer Pyramidal Neurons in the Neocortex: Bridging Cellular Properties to Functional Consequences.
Arielle Baker, Brian Kalmbach, Mieko Morishima, Juhyun Kim, Ashley Juavinett, Nuo Li, Nikolai Dembrow. J Neurosci 2018
48
8

A robust ex vivo experimental platform for molecular-genetic dissection of adult human neocortical cell types and circuits.
Jonathan T Ting, Brian Kalmbach, Peter Chong, Rebecca de Frates, C Dirk Keene, Ryder P Gwinn, Charles Cobbs, Andrew L Ko, Jeffrey G Ojemann, Richard G Ellenbogen,[...]. Sci Rep 2018
32
12

Projection-specific neuromodulation of medial prefrontal cortex neurons.
Nikolai C Dembrow, Raymond A Chitwood, Daniel Johnston. J Neurosci 2010
195
4


Activity-dependent scaling of quantal amplitude in neocortical neurons.
G G Turrigiano, K R Leslie, N S Desai, L C Rutherford, S B Nelson. Nature 1998
4

Reconstruction and Simulation of Neocortical Microcircuitry.
Henry Markram, Eilif Muller, Srikanth Ramaswamy, Michael W Reimann, Marwan Abdellah, Carlos Aguado Sanchez, Anastasia Ailamaki, Lidia Alonso-Nanclares, Nicolas Antille, Selim Arsever,[...]. Cell 2015
538
4

Enhanced Dendritic Compartmentalization in Human Cortical Neurons.
Lou Beaulieu-Laroche, Enrique H S Toloza, Marie-Sophie van der Goes, Mathieu Lafourcade, Derrick Barnagian, Ziv M Williams, Emad N Eskandar, Matthew P Frosch, Sydney S Cash, Mark T Harnett. Cell 2018
81
4

Conserved cell types with divergent features in human versus mouse cortex.
Rebecca D Hodge, Trygve E Bakken, Jeremy A Miller, Kimberly A Smith, Eliza R Barkan, Lucas T Graybuck, Jennie L Close, Brian Long, Nelson Johansen, Osnat Penn,[...]. Nature 2019
460
4

Sensitive red protein calcium indicators for imaging neural activity.
Hod Dana, Boaz Mohar, Yi Sun, Sujatha Narayan, Andrew Gordus, Jeremy P Hasseman, Getahun Tsegaye, Graham T Holt, Amy Hu, Deepika Walpita,[...]. Elife 2016
421
4

Modulation of striatal projection systems by dopamine.
Charles R Gerfen, D James Surmeier. Annu Rev Neurosci 2011
924
4

Lateral hypothalamic circuits for feeding and reward.
Garret D Stuber, Roy A Wise. Nat Neurosci 2016
241
3

Equalizing excitation-inhibition ratios across visual cortical neurons.
Mingshan Xue, Bassam V Atallah, Massimo Scanziani. Nature 2014
352
3

Physiology and pharmacology of striatal neurons.
Anatol C Kreitzer. Annu Rev Neurosci 2009
294
3

Synaptic and behavioral profile of multiple glutamatergic inputs to the nucleus accumbens.
Jonathan P Britt, Faiza Benaliouad, Ross A McDevitt, Garret D Stuber, Roy A Wise, Antonello Bonci. Neuron 2012
430
3

Patch-clamp recording in brain slices with improved slicer technology.
J R P Geiger, J Bischofberger, I Vida, U Fröbe, S Pfitzinger, H J Weber, K Haverkampf, P Jonas. Pflugers Arch 2002
61
4

A simple method for organotypic cultures of nervous tissue.
L Stoppini, P A Buchs, D Muller. J Neurosci Methods 1991
3

Direct measurement of somatic voltage clamp errors in central neurons.
Stephen R Williams, Simon J Mitchell. Nat Neurosci 2008
258
3


Clusters of hyperactive neurons near amyloid plaques in a mouse model of Alzheimer's disease.
Marc Aurel Busche, Gerhard Eichhoff, Helmuth Adelsberger, Dorothee Abramowski, Karl-Heinz Wiederhold, Christian Haass, Matthias Staufenbiel, Arthur Konnerth, Olga Garaschuk. Science 2008
638
3

The action potential in mammalian central neurons.
Bruce P Bean. Nat Rev Neurosci 2007
839
3

The Retrotrapezoid Nucleus: Central Chemoreceptor and Regulator of Breathing Automaticity.
Patrice G Guyenet, Ruth L Stornetta, George M P R Souza, Stephen B G Abbott, Yingtang Shi, Douglas A Bayliss. Trends Neurosci 2019
67
4

Hypoxia silences retrotrapezoid nucleus respiratory chemoreceptors via alkalosis.
Tyler M Basting, Peter G R Burke, Roy Kanbar, Kenneth E Viar, Daniel S Stornetta, Ruth L Stornetta, Patrice G Guyenet. J Neurosci 2015
43
6


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.