Jeremy Freeman, Nikita Vladimirov, Takashi Kawashima, Yu Mu, Nicholas J Sofroniew, Davis V Bennett, Joshua Rosen, Chao-Tsung Yang, Loren L Looger, Misha B Ahrens. Nat Methods 2014
Times Cited: 142
Times Cited: 142
Times Cited
Times Co-cited
Similarity
Ultrasensitive fluorescent proteins for imaging neuronal activity.
Tsai-Wen Chen, Trevor J Wardill, Yi Sun, Stefan R Pulver, Sabine L Renninger, Amy Baohan, Eric R Schreiter, Rex A Kerr, Michael B Orger, Vivek Jayaraman,[...]. Nature 2013
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Whole-brain functional imaging at cellular resolution using light-sheet microscopy.
Misha B Ahrens, Michael B Orger, Drew N Robson, Jennifer M Li, Philipp J Keller. Nat Methods 2013
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Light-sheet functional imaging in fictively behaving zebrafish.
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Nikita Vladimirov, Yu Mu, Takashi Kawashima, Davis V Bennett, Chao-Tsung Yang, Loren L Looger, Philipp J Keller, Jeremy Freeman, Misha B Ahrens. Nat Methods 2014
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Whole-brain activity mapping onto a zebrafish brain atlas.
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Brain-wide neuronal dynamics during motor adaptation in zebrafish.
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Whole-brain activity maps reveal stereotyped, distributed networks for visuomotor behavior.
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Brain-wide mapping of neural activity controlling zebrafish exploratory locomotion.
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Automated analysis of cellular signals from large-scale calcium imaging data.
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From Whole-Brain Data to Functional Circuit Models: The Zebrafish Optomotor Response.
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Ancestral Circuits for the Coordinated Modulation of Brain State.
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Visuomotor transformations underlying hunting behavior in zebrafish.
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Neural Circuits Underlying Visually Evoked Escapes in Larval Zebrafish.
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Simultaneous whole-animal 3D imaging of neuronal activity using light-field microscopy.
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Control of visually guided behavior by distinct populations of spinal projection neurons.
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Simultaneous Denoising, Deconvolution, and Demixing of Calcium Imaging Data.
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Fast functional imaging of multiple brain regions in intact zebrafish larvae using selective plane illumination microscopy.
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Transgenic tools to characterize neuronal properties of discrete populations of zebrafish neurons.
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Chie Satou, Yukiko Kimura, Hiromi Hirata, Maximiliano L Suster, Koichi Kawakami, Shin-ichi Higashijima. Development 2013
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The Serotonergic System Tracks the Outcomes of Actions to Mediate Short-Term Motor Learning.
Takashi Kawashima, Maarten F Zwart, Chao-Tsung Yang, Brett D Mensh, Misha B Ahrens. Cell 2016
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Dimensionality reduction for large-scale neural recordings.
John P Cunningham, Byron M Yu. Nat Neurosci 2014
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Functional architecture of an optic flow-responsive area that drives horizontal eye movements in zebrafish.
Fumi Kubo, Bastian Hablitzel, Marco Dal Maschio, Wolfgang Driever, Herwig Baier, Aristides B Arrenberg. Neuron 2014
Fumi Kubo, Bastian Hablitzel, Marco Dal Maschio, Wolfgang Driever, Herwig Baier, Aristides B Arrenberg. Neuron 2014
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Pan-neuronal calcium imaging with cellular resolution in freely swimming zebrafish.
Dal Hyung Kim, Jungsoo Kim, João C Marques, Abhinav Grama, David G C Hildebrand, Wenchao Gu, Jennifer M Li, Drew N Robson. Nat Methods 2017
Dal Hyung Kim, Jungsoo Kim, João C Marques, Abhinav Grama, David G C Hildebrand, Wenchao Gu, Jennifer M Li, Drew N Robson. Nat Methods 2017
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Neuronal Dynamics Regulating Brain and Behavioral State Transitions.
Aaron S Andalman, Vanessa M Burns, Matthew Lovett-Barron, Michael Broxton, Ben Poole, Samuel J Yang, Logan Grosenick, Talia N Lerner, Ritchie Chen, Tyler Benster,[...]. Cell 2019
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A Visual Pathway for Looming-Evoked Escape in Larval Zebrafish.
Incinur Temizer, Joseph C Donovan, Herwig Baier, Julia L Semmelhack. Curr Biol 2015
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Whole-central nervous system functional imaging in larval Drosophila.
William C Lemon, Stefan R Pulver, Burkhard Höckendorf, Katie McDole, Kristin Branson, Jeremy Freeman, Philipp J Keller. Nat Commun 2015
William C Lemon, Stefan R Pulver, Burkhard Höckendorf, Katie McDole, Kristin Branson, Jeremy Freeman, Philipp J Keller. Nat Commun 2015
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A mesoscale connectome of the mouse brain.
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Independent optical excitation of distinct neural populations.
Nathan C Klapoetke, Yasunobu Murata, Sung Soo Kim, Stefan R Pulver, Amanda Birdsey-Benson, Yong Ku Cho, Tania K Morimoto, Amy S Chuong, Eric J Carpenter, Zhijian Tian,[...]. Nat Methods 2014
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Linking Neurons to Network Function and Behavior by Two-Photon Holographic Optogenetics and Volumetric Imaging.
Marco Dal Maschio, Joseph C Donovan, Thomas O Helmbrecht, Herwig Baier. Neuron 2017
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Feeding State Modulates Behavioral Choice and Processing of Prey Stimuli in the Zebrafish Tectum.
Alessandro Filosa, Alison J Barker, Marco Dal Maschio, Herwig Baier. Neuron 2016
Alessandro Filosa, Alison J Barker, Marco Dal Maschio, Herwig Baier. Neuron 2016
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Rapid whole brain imaging of neural activity in freely behaving larval zebrafish (Danio rerio).
Lin Cong, Zeguan Wang, Yuming Chai, Wei Hang, Chunfeng Shang, Wenbin Yang, Lu Bai, Jiulin Du, Kai Wang, Quan Wen. Elife 2017
Lin Cong, Zeguan Wang, Yuming Chai, Wei Hang, Chunfeng Shang, Wenbin Yang, Lu Bai, Jiulin Du, Kai Wang, Quan Wen. Elife 2017
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Fast nonnegative deconvolution for spike train inference from population calcium imaging.
Joshua T Vogelstein, Adam M Packer, Timothy A Machado, Tanya Sippy, Baktash Babadi, Rafael Yuste, Liam Paninski. J Neurophysiol 2010
Joshua T Vogelstein, Adam M Packer, Timothy A Machado, Tanya Sippy, Baktash Babadi, Rafael Yuste, Liam Paninski. J Neurophysiol 2010
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SIMA: Python software for analysis of dynamic fluorescence imaging data.
Patrick Kaifosh, Jeffrey D Zaremba, Nathan B Danielson, Attila Losonczy. Front Neuroinform 2014
Patrick Kaifosh, Jeffrey D Zaremba, Nathan B Danielson, Attila Losonczy. Front Neuroinform 2014
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Filtering of visual information in the tectum by an identified neural circuit.
Filippo Del Bene, Claire Wyart, Estuardo Robles, Amanda Tran, Loren Looger, Ethan K Scott, Ehud Y Isacoff, Herwig Baier. Science 2010
Filippo Del Bene, Claire Wyart, Estuardo Robles, Amanda Tran, Loren Looger, Ethan K Scott, Ehud Y Isacoff, Herwig Baier. Science 2010
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Classification of object size in retinotectal microcircuits.
Stephanie J Preuss, Chintan A Trivedi, Colette M vom Berg-Maurer, Soojin Ryu, Johann H Bollmann. Curr Biol 2014
Stephanie J Preuss, Chintan A Trivedi, Colette M vom Berg-Maurer, Soojin Ryu, Johann H Bollmann. Curr Biol 2014
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Optimization of a GCaMP calcium indicator for neural activity imaging.
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Reconstruction of zebrafish early embryonic development by scanned light sheet microscopy.
Philipp J Keller, Annette D Schmidt, Joachim Wittbrodt, Ernst H K Stelzer. Science 2008
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Optical sectioning deep inside live embryos by selective plane illumination microscopy.
Jan Huisken, Jim Swoger, Filippo Del Bene, Joachim Wittbrodt, Ernst H K Stelzer. Science 2004
Jan Huisken, Jim Swoger, Filippo Del Bene, Joachim Wittbrodt, Ernst H K Stelzer. Science 2004
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Fiji: an open-source platform for biological-image analysis.
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A large field of view two-photon mesoscope with subcellular resolution for in vivo imaging.
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A 3D Searchable Database of Transgenic Zebrafish Gal4 and Cre Lines for Functional Neuroanatomy Studies.
Gregory D Marquart, Kathryn M Tabor, Mary Brown, Jennifer L Strykowski, Gaurav K Varshney, Matthew C LaFave, Thomas Mueller, Shawn M Burgess, Shin-Ichi Higashijima, Harold A Burgess. Front Neural Circuits 2015
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Simultaneous Multi-plane Imaging of Neural Circuits.
Weijian Yang, Jae-Eun Kang Miller, Luis Carrillo-Reid, Eftychios Pnevmatikakis, Liam Paninski, Rafael Yuste, Darcy S Peterka. Neuron 2016
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Putting big data to good use in neuroscience.
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Complex brain networks: graph theoretical analysis of structural and functional systems.
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Focusing on optic tectum circuitry through the lens of genetics.
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Development of the retinofugal projections in the embryonic and larval zebrafish (Brachydanio rerio).
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Miniaturized integration of a fluorescence microscope.
Kunal K Ghosh, Laurie D Burns, Eric D Cocker, Axel Nimmerjahn, Yaniv Ziv, Abbas El Gamal, Mark J Schnitzer. Nat Methods 2011
Kunal K Ghosh, Laurie D Burns, Eric D Cocker, Axel Nimmerjahn, Yaniv Ziv, Abbas El Gamal, Mark J Schnitzer. Nat Methods 2011
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Cellular level brain imaging in behaving mammals: an engineering approach.
Elizabeth J O Hamel, Benjamin F Grewe, Jones G Parker, Mark J Schnitzer. Neuron 2015
Elizabeth J O Hamel, Benjamin F Grewe, Jones G Parker, Mark J Schnitzer. Neuron 2015
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The brain activity map project and the challenge of functional connectomics.
A Paul Alivisatos, Miyoung Chun, George M Church, Ralph J Greenspan, Michael L Roukes, Rafael Yuste. Neuron 2012
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Spontaneous neuronal network dynamics reveal circuit's functional adaptations for behavior.
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9
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