A citation-based method for searching scientific literature

Sui Wang, Cem Sengel, Mark M Emerson, Constance L Cepko. Dev Cell 2014
Times Cited: 110







List of co-cited articles
1239 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Electroporation and RNA interference in the rodent retina in vivo and in vitro.
Takahiko Matsuda, Constance L Cepko. Proc Natl Acad Sci U S A 2004
742
28

Otx2 homeobox gene controls retinal photoreceptor cell fate and pineal gland development.
Akihiro Nishida, Akiko Furukawa, Chieko Koike, Yasuo Tano, Shinichi Aizawa, Isao Matsuo, Takahisa Furukawa. Nat Neurosci 2003
419
25


Multiplex genome engineering using CRISPR/Cas systems.
Le Cong, F Ann Ran, David Cox, Shuailiang Lin, Robert Barretto, Naomi Habib, Patrick D Hsu, Xuebing Wu, Wenyan Jiang, Luciano A Marraffini,[...]. Science 2013
21

Otx2 and Onecut1 promote the fates of cone photoreceptors and horizontal cells and repress rod photoreceptors.
Mark M Emerson, Natalia Surzenko, Jillian J Goetz, Jeffrey Trimarchi, Constance L Cepko. Dev Cell 2013
74
27

Blimp1 controls photoreceptor versus bipolar cell fate choice during retinal development.
Joseph A Brzezinski, Deepak A Lamba, Thomas A Reh. Development 2010
93
20

Highly Parallel Genome-wide Expression Profiling of Individual Cells Using Nanoliter Droplets.
Evan Z Macosko, Anindita Basu, Rahul Satija, James Nemesh, Karthik Shekhar, Melissa Goldman, Itay Tirosh, Allison R Bialas, Nolan Kamitaki, Emily M Martersteck,[...]. Cell 2015
18

A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity.
Martin Jinek, Krzysztof Chylinski, Ines Fonfara, Michael Hauer, Jennifer A Doudna, Emmanuelle Charpentier. Science 2012
17

Nrl is required for rod photoreceptor development.
A J Mears, M Kondo, P K Swain, Y Takada, R A Bush, T L Saunders, P A Sieving, A Swaroop. Nat Genet 2001
679
17


RNA-guided human genome engineering via Cas9.
Prashant Mali, Luhan Yang, Kevin M Esvelt, John Aach, Marc Guell, James E DiCarlo, Julie E Norville, George M Church. Science 2013
16


Functional roles of Otx2 transcription factor in postnatal mouse retinal development.
Chieko Koike, Akihiro Nishida, Shinji Ueno, Hiromitsu Saito, Rikako Sanuki, Shigeru Sato, Akiko Furukawa, Shinichi Aizawa, Isao Matsuo, Noboru Suzuki,[...]. Mol Cell Biol 2007
135
16

Blimp1 suppresses Chx10 expression in differentiating retinal photoreceptor precursors to ensure proper photoreceptor development.
Kimiko Katoh, Yoshihiro Omori, Akishi Onishi, Shigeru Sato, Mineo Kondo, Takahisa Furukawa. J Neurosci 2010
80
20


Comprehensive Classification of Retinal Bipolar Neurons by Single-Cell Transcriptomics.
Karthik Shekhar, Sylvain W Lapan, Irene E Whitney, Nicholas M Tran, Evan Z Macosko, Monika Kowalczyk, Xian Adiconis, Joshua Z Levin, James Nemesh, Melissa Goldman,[...]. Cell 2016
540
15

Timing and topography of cell genesis in the rat retina.
David H Rapaport, Lily L Wong, Eric D Wood, Douglas Yasumura, Matthew M LaVail. J Comp Neurol 2004
273
14


Chx10 is required to block photoreceptor differentiation but is dispensable for progenitor proliferation in the postnatal retina.
Izzy Livne-Bar, Marek Pacal, Melissa C Cheung, Mark Hankin, Judy Trogadis, Danian Chen, Kimberley M Dorval, Rod Bremner. Proc Natl Acad Sci U S A 2006
72
19


In Vivo CRISPR/Cas9 Gene Editing Corrects Retinal Dystrophy in the S334ter-3 Rat Model of Autosomal Dominant Retinitis Pigmentosa.
Benjamin Bakondi, Wenjian Lv, Bin Lu, Melissa K Jones, Yuchun Tsai, Kevin J Kim, Rachelle Levy, Aslam Abbasi Akhtar, Joshua J Breunig, Clive N Svendsen,[...]. Mol Ther 2016
192
14

Cell fate determination in the vertebrate retina.
C L Cepko, C P Austin, X Yang, M Alexiades, D Ezzeddine. Proc Natl Acad Sci U S A 1996
770
13


Crx, a novel Otx-like paired-homeodomain protein, binds to and transactivates photoreceptor cell-specific genes.
S Chen, Q L Wang, Z Nie, H Sun, G Lennon, N G Copeland, D J Gilbert, N A Jenkins, D J Zack. Neuron 1997
552
13

Controlled expression of transgenes introduced by in vivo electroporation.
Takahiko Matsuda, Constance L Cepko. Proc Natl Acad Sci U S A 2007
437
13

Single-Cell RNA-Seq Analysis of Retinal Development Identifies NFI Factors as Regulating Mitotic Exit and Late-Born Cell Specification.
Brian S Clark, Genevieve L Stein-O'Brien, Fion Shiau, Gabrielle H Cannon, Emily Davis-Marcisak, Thomas Sherman, Clayton P Santiago, Thanh V Hoang, Fatemeh Rajaii, Rebecca E James-Esposito,[...]. Neuron 2019
157
13

In vivo genome editing using Staphylococcus aureus Cas9.
F Ann Ran, Le Cong, Winston X Yan, David A Scott, Jonathan S Gootenberg, Andrea J Kriz, Bernd Zetsche, Ophir Shalem, Xuebing Wu, Kira S Makarova,[...]. Nature 2015
12


A thyroid hormone receptor that is required for the development of green cone photoreceptors.
L Ng, J B Hurley, B Dierks, M Srinivas, C Saltó, B Vennström, T A Reh, D Forrest. Nat Genet 2001
392
12

Genome engineering using the CRISPR-Cas9 system.
F Ann Ran, Patrick D Hsu, Jason Wright, Vineeta Agarwala, David A Scott, Feng Zhang. Nat Protoc 2013
12


Transcription factor Olig2 defines subpopulations of retinal progenitor cells biased toward specific cell fates.
Brian P Hafler, Natalia Surzenko, Kevin T Beier, Claudio Punzo, Jeffrey M Trimarchi, Jennifer H Kong, Constance L Cepko. Proc Natl Acad Sci U S A 2012
83
14

Ocular retardation mouse caused by Chx10 homeobox null allele: impaired retinal progenitor proliferation and bipolar cell differentiation.
M Burmeister, J Novak, M Y Liang, S Basu, L Ploder, N L Hawes, D Vidgen, F Hoover, D Goldman, V I Kalnins,[...]. Nat Genet 1996
419
12

Dkk3-Cre BAC transgenic mouse line: a tool for highly efficient gene deletion in retinal progenitor cells.
Shigeru Sato, Tatsuya Inoue, Koji Terada, Isao Matsuo, Shinichi Aizawa, Yasuo Tano, Takashi Fujikado, Takahisa Furukawa. Genesis 2007
67
17

An essential role for RAX homeoprotein and NOTCH-HES signaling in Otx2 expression in embryonic retinal photoreceptor cell fate determination.
Yuki Muranishi, Koji Terada, Tatsuya Inoue, Kimiko Katoh, Toshinori Tsujii, Rikako Sanuki, Daisuke Kurokawa, Shinichi Aizawa, Yasuhiro Tamaki, Takahisa Furukawa. J Neurosci 2011
83
14

CRX ChIP-seq reveals the cis-regulatory architecture of mouse photoreceptors.
Joseph C Corbo, Karen A Lawrence, Marcus Karlstetter, Connie A Myers, Musa Abdelaziz, William Dirkes, Karin Weigelt, Martin Seifert, Vladimir Benes, Lars G Fritsche,[...]. Genome Res 2010
137
12

AAV-Mediated CRISPR/Cas Gene Editing of Retinal Cells In Vivo.
Sandy S C Hung, Vicki Chrysostomou, Fan Li, Jeremiah K H Lim, Jiang-Hui Wang, Joseph E Powell, Leilei Tu, Maciej Daniszewski, Camden Lo, Raymond C Wong,[...]. Invest Ophthalmol Vis Sci 2016
92
13

Nrl knockdown by AAV-delivered CRISPR/Cas9 prevents retinal degeneration in mice.
Wenhan Yu, Suddhasil Mookherjee, Vijender Chaitankar, Suja Hiriyanna, Jung-Woong Kim, Matthew Brooks, Yasaman Ataeijannati, Xun Sun, Lijin Dong, Tiansen Li,[...]. Nat Commun 2017
166
12


Cell Type-Specific Epigenomic Analysis Reveals a Uniquely Closed Chromatin Architecture in Mouse Rod Photoreceptors.
Andrew E O Hughes, Jennifer M Enright, Connie A Myers, Susan Q Shen, Joseph C Corbo. Sci Rep 2017
48
22

Genome editing. The new frontier of genome engineering with CRISPR-Cas9.
Jennifer A Doudna, Emmanuelle Charpentier. Science 2014
10

DNA targeting specificity of RNA-guided Cas9 nucleases.
Patrick D Hsu, David A Scott, Joshua A Weinstein, F Ann Ran, Silvana Konermann, Vineeta Agarwala, Yinqing Li, Eli J Fine, Xuebing Wu, Ophir Shalem,[...]. Nat Biotechnol 2013
10

In vivo interrogation of gene function in the mammalian brain using CRISPR-Cas9.
Lukasz Swiech, Matthias Heidenreich, Abhishek Banerjee, Naomi Habib, Yinqing Li, John Trombetta, Mriganka Sur, Feng Zhang. Nat Biotechnol 2015
501
10

Photoreceptor cell fate specification in vertebrates.
Joseph A Brzezinski, Thomas A Reh. Development 2015
86
11

Pax6 is required for the multipotent state of retinal progenitor cells.
T Marquardt, R Ashery-Padan, N Andrejewski, R Scardigli, F Guillemot, P Gruss. Cell 2001
688
10

The major cell populations of the mouse retina.
C J Jeon, E Strettoi, R H Masland. J Neurosci 1998
931
10

Transcriptional regulation of photoreceptor development and homeostasis in the mammalian retina.
Anand Swaroop, Douglas Kim, Douglas Forrest. Nat Rev Neurosci 2010
347
10

Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-binding proteins and nucleosome position.
Jason D Buenrostro, Paul G Giresi, Lisa C Zaba, Howard Y Chang, William J Greenleaf. Nat Methods 2013
10

In vivo Editing of the Human Mutant Rhodopsin Gene by Electroporation of Plasmid-based CRISPR/Cas9 in the Mouse Retina.
Maria Carmela Latella, Maria Teresa Di Salvo, Fabienne Cocchiarella, Daniela Benati, Giulia Grisendi, Antonella Comitato, Valeria Marigo, Alessandra Recchia. Mol Ther Nucleic Acids 2016
110
10

Molecular Anatomy of the Developing Human Retina.
Akina Hoshino, Rinki Ratnapriya, Matthew J Brooks, Vijender Chaitankar, Matthew S Wilken, Chi Zhang, Margaret R Starostik, Linn Gieser, Anna La Torre, Mario Nishio,[...]. Dev Cell 2017
113
10


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.