A citation-based method for searching scientific literature

Ye Zhang, Kenian Chen, Steven A Sloan, Mariko L Bennett, Anja R Scholze, Sean O'Keeffe, Hemali P Phatnani, Paolo Guarnieri, Christine Caneda, Nadine Ruderisch, Shuyun Deng, Shane A Liddelow, Chaolin Zhang, Richard Daneman, Tom Maniatis, Ben A Barres, Jian Qian Wu. J Neurosci 2014
Times Cited: 2390







List of co-cited articles
805 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Purification and Characterization of Progenitor and Mature Human Astrocytes Reveals Transcriptional and Functional Differences with Mouse.
Ye Zhang, Steven A Sloan, Laura E Clarke, Christine Caneda, Colton A Plaza, Paul D Blumenthal, Hannes Vogel, Gary K Steinberg, Michael S B Edwards, Gordon Li,[...]. Neuron 2016
825
17

Neurotoxic reactive astrocytes are induced by activated microglia.
Shane A Liddelow, Kevin A Guttenplan, Laura E Clarke, Frederick C Bennett, Christopher J Bohlen, Lucas Schirmer, Mariko L Bennett, Alexandra E Münch, Won-Suk Chung, Todd C Peterson,[...]. Nature 2017
12

The microglial sensome revealed by direct RNA sequencing.
Suzanne E Hickman, Nathan D Kingery, Toshiro K Ohsumi, Mark L Borowsky, Li-chong Wang, Terry K Means, Joseph El Khoury. Nat Neurosci 2013
785
10

A transcriptome database for astrocytes, neurons, and oligodendrocytes: a new resource for understanding brain development and function.
John D Cahoy, Ben Emery, Amit Kaushal, Lynette C Foo, Jennifer L Zamanian, Karen S Christopherson, Yi Xing, Jane L Lubischer, Paul A Krieg, Sergey A Krupenko,[...]. J Neurosci 2008
10

Normal aging induces A1-like astrocyte reactivity.
Laura E Clarke, Shane A Liddelow, Chandrani Chakraborty, Alexandra E Münch, Myriam Heiman, Ben A Barres. Proc Natl Acad Sci U S A 2018
392
10

A Unique Microglia Type Associated with Restricting Development of Alzheimer's Disease.
Hadas Keren-Shaul, Amit Spinrad, Assaf Weiner, Orit Matcovitch-Natan, Raz Dvir-Szternfeld, Tyler K Ulland, Eyal David, Kuti Baruch, David Lara-Astaiso, Beata Toth,[...]. Cell 2017
9

Oligodendrocyte heterogeneity in the mouse juvenile and adult central nervous system.
Sueli Marques, Amit Zeisel, Simone Codeluppi, David van Bruggen, Ana Mendanha Falcão, Lin Xiao, Huiliang Li, Martin Häring, Hannah Hochgerner, Roman A Romanov,[...]. Science 2016
378
8

The TREM2-APOE Pathway Drives the Transcriptional Phenotype of Dysfunctional Microglia in Neurodegenerative Diseases.
Susanne Krasemann, Charlotte Madore, Ron Cialic, Caroline Baufeld, Narghes Calcagno, Rachid El Fatimy, Lien Beckers, Elaine O'Loughlin, Yang Xu, Zain Fanek,[...]. Immunity 2017
793
7

Complement and microglia mediate early synapse loss in Alzheimer mouse models.
Soyon Hong, Victoria F Beja-Glasser, Bianca M Nfonoyim, Arnaud Frouin, Shaomin Li, Saranya Ramakrishnan, Katherine M Merry, Qiaoqiao Shi, Arnon Rosenthal, Ben A Barres,[...]. Science 2016
7

Single-Cell RNA Sequencing of Microglia throughout the Mouse Lifespan and in the Injured Brain Reveals Complex Cell-State Changes.
Timothy R Hammond, Connor Dufort, Lasse Dissing-Olesen, Stefanie Giera, Adam Young, Alec Wysoker, Alec J Walker, Frederick Gergits, Michael Segel, James Nemesh,[...]. Immunity 2019
457
6

Resting microglial cells are highly dynamic surveillants of brain parenchyma in vivo.
Axel Nimmerjahn, Frank Kirchhoff, Fritjof Helmchen. Science 2005
6

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2.
Michael I Love, Wolfgang Huber, Simon Anders. Genome Biol 2014
6

In Vivo Regulation of Oligodendrocyte Precursor Cell Proliferation and Differentiation by the AMPA-Receptor Subunit GluA2.
Ting-Jiun Chen, Bartosz Kula, Bálint Nagy, Ruxandra Barzan, Andrea Gall, Ingrid Ehrlich, Maria Kukley. Cell Rep 2018
35
17

Oligodendrocyte Progenitor Cells Become Regionally Diverse and Heterogeneous with Age.
Sonia Olivia Spitzer, Sergey Sitnikov, Yasmine Kamen, Kimberley Anne Evans, Deborah Kronenberg-Versteeg, Sabine Dietmann, Omar de Faria, Sylvia Agathou, Ragnhildur Thóra Káradóttir. Neuron 2019
88
6

Glutamatergic synapses on oligodendrocyte precursor cells in the hippocampus.
D E Bergles, J D Roberts, P Somogyi, C E Jahr. Nature 2000
631
6

Fate mapping analysis reveals that adult microglia derive from primitive macrophages.
Florent Ginhoux, Melanie Greter, Marylene Leboeuf, Sayan Nandi, Peter See, Solen Gokhan, Mark F Mehler, Simon J Conway, Lai Guan Ng, E Richard Stanley,[...]. Science 2010
6

New tools for studying microglia in the mouse and human CNS.
Mariko L Bennett, F Chris Bennett, Shane A Liddelow, Bahareh Ajami, Jennifer L Zamanian, Nathaniel B Fernhoff, Sara B Mulinyawe, Christopher J Bohlen, Aykezar Adil, Andrew Tucker,[...]. Proc Natl Acad Sci U S A 2016
773
6

The Aging Astrocyte Transcriptome from Multiple Regions of the Mouse Brain.
Matthew M Boisvert, Galina A Erikson, Maxim N Shokhirev, Nicola J Allen. Cell Rep 2018
216
6

Conditional Deletion of the L-Type Calcium Channel Cav1.2 in Oligodendrocyte Progenitor Cells Affects Postnatal Myelination in Mice.
Veronica T Cheli, Diara A Santiago González, Tenzing Namgyal Lama, Vilma Spreuer, Vance Handley, Geoffrey G Murphy, Pablo M Paez. J Neurosci 2016
43
11

Lactate in the brain: from metabolic end-product to signalling molecule.
Pierre J Magistretti, Igor Allaman. Nat Rev Neurosci 2018
283
5

ATP mediates rapid microglial response to local brain injury in vivo.
Dimitrios Davalos, Jaime Grutzendler, Guang Yang, Jiyun V Kim, Yi Zuo, Steffen Jung, Dan R Littman, Michael L Dustin, Wen-Biao Gan. Nat Neurosci 2005
5

Vesicular release of glutamate from unmyelinated axons in white matter.
Jennifer L Ziskin, Akiko Nishiyama, Maria Rubio, Masahiro Fukaya, Dwight E Bergles. Nat Neurosci 2007
338
5

Oligodendrocyte dynamics in the healthy adult CNS: evidence for myelin remodeling.
Kaylene M Young, Konstantina Psachoulia, Richa B Tripathi, Sara-Jane Dunn, Lee Cossell, David Attwell, Koujiro Tohyama, William D Richardson. Neuron 2013
498
5

Demyelination causes adult CNS progenitors to revert to an immature state and express immune cues that support their migration.
Sarah Moyon, Anne Laure Dubessy, Marie Stephane Aigrot, Matthew Trotter, Jeffrey K Huang, Luce Dauphinot, Marie Claude Potier, Christophe Kerninon, Stephane Melik Parsadaniantz, Robin J M Franklin,[...]. J Neurosci 2015
134
5

Vesicular glutamate release from axons in white matter.
Maria Kukley, Estibaliz Capetillo-Zarate, Dirk Dietrich. Nat Neurosci 2007
328
5

Genomic analysis of reactive astrogliosis.
Jennifer L Zamanian, Lijun Xu, Lynette C Foo, Navid Nouri, Lu Zhou, Rona G Giffard, Ben A Barres. J Neurosci 2012
5


Microglia sculpt postnatal neural circuits in an activity and complement-dependent manner.
Dorothy P Schafer, Emily K Lehrman, Amanda G Kautzman, Ryuta Koyama, Alan R Mardinly, Ryo Yamasaki, Richard M Ransohoff, Michael E Greenberg, Ben A Barres, Beth Stevens. Neuron 2012
5

Age-dependent fate and lineage restriction of single NG2 cells.
Xiaoqin Zhu, Robert A Hill, Dirk Dietrich, Mila Komitova, Ryusuke Suzuki, Akiko Nishiyama. Development 2011
290
5

Neural Circuit-Specialized Astrocytes: Transcriptomic, Proteomic, Morphological, and Functional Evidence.
Hua Chai, Blanca Diaz-Castro, Eiji Shigetomi, Emma Monte, J Christopher Octeau, Xinzhu Yu, Whitaker Cohn, Pradeep S Rajendran, Thomas M Vondriska, Julian P Whitelegge,[...]. Neuron 2017
264
5

Identification of region-specific astrocyte subtypes at single cell resolution.
Mykhailo Y Batiuk, Araks Martirosyan, Jérôme Wahis, Filip de Vin, Catherine Marneffe, Carola Kusserow, Jordan Koeppen, João Filipe Viana, João Filipe Oliveira, Thierry Voet,[...]. Nat Commun 2020
112
5

Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles.
Aravind Subramanian, Pablo Tamayo, Vamsi K Mootha, Sayan Mukherjee, Benjamin L Ebert, Michael A Gillette, Amanda Paulovich, Scott L Pomeroy, Todd R Golub, Eric S Lander,[...]. Proc Natl Acad Sci U S A 2005
5

Physiology of microglia.
Helmut Kettenmann, Uwe-Karsten Hanisch, Mami Noda, Alexei Verkhratsky. Physiol Rev 2011
4

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data.
Mark D Robinson, Davis J McCarthy, Gordon K Smyth. Bioinformatics 2010
4

Comprehensive Integration of Single-Cell Data.
Tim Stuart, Andrew Butler, Paul Hoffman, Christoph Hafemeister, Efthymia Papalexi, William M Mauck, Yuhan Hao, Marlon Stoeckius, Peter Smibert, Rahul Satija. Cell 2019
4

Bioenergetic regulation of microglia.
Soumitra Ghosh, Erika Castillo, Elma S Frias, Raymond A Swanson. Glia 2018
76
5

Microglia in Physiology and Disease.
Susanne A Wolf, H W G M Boddeke, Helmut Kettenmann. Annu Rev Physiol 2017
496
4

Lipopolysaccharide-induced alteration of mitochondrial morphology induces a metabolic shift in microglia modulating the inflammatory response in vitro and in vivo.
Syam Nair, Kristina S Sobotka, Pooja Joshi, Pierre Gressens, Bobbi Fleiss, Claire Thornton, Carina Mallard, Henrik Hagberg. Glia 2019
58
6

A Breakdown in Metabolic Reprogramming Causes Microglia Dysfunction in Alzheimer's Disease.
Sung Hoon Baik, Seokjo Kang, Woochan Lee, Hayoung Choi, Sunwoo Chung, Jong-Il Kim, Inhee Mook-Jung. Cell Metab 2019
105
4

mTOR-mediated metabolic reprogramming shapes distinct microglia functions in response to lipopolysaccharide and ATP.
Yaling Hu, Weihao Mai, Lunhao Chen, Kelei Cao, Bin Zhang, Zhenjie Zhang, Yijun Liu, Huifang Lou, Shumin Duan, Zhihua Gao. Glia 2020
22
18

Regional astrocyte allocation regulates CNS synaptogenesis and repair.
Hui-Hsin Tsai, Huiliang Li, Luis C Fuentealba, Anna V Molofsky, Raquel Taveira-Marques, Helin Zhuang, April Tenney, Alice T Murnen, Stephen P J Fancy, Florian Merkle,[...]. Science 2012
291
4

Signalling through AMPA receptors on oligodendrocyte precursors promotes myelination by enhancing oligodendrocyte survival.
Eleni Kougioumtzidou, Takahiro Shimizu, Nicola B Hamilton, Koujiro Tohyama, Rolf Sprengel, Hannah Monyer, David Attwell, William D Richardson. Elife 2017
60
6

Disease-specific oligodendrocyte lineage cells arise in multiple sclerosis.
Ana Mendanha Falcão, David van Bruggen, Sueli Marques, Mandy Meijer, Sarah Jäkel, Eneritz Agirre, Samudyata, Elisa M Floriddia, Darya P Vanichkina, Charles Ffrench-Constant,[...]. Nat Med 2018
127
4


Oligodendroglial NMDA Receptors Regulate Glucose Import and Axonal Energy Metabolism.
Aiman S Saab, Iva D Tzvetavona, Andrea Trevisiol, Selva Baltan, Payam Dibaj, Kathrin Kusch, Wiebke Möbius, Bianka Goetze, Hannah M Jahn, Wenhui Huang,[...]. Neuron 2016
210
4

Glucose pathways adaptation supports acquisition of activated microglia phenotype.
J Gimeno-Bayón, A López-López, M J Rodríguez, N Mahy. J Neurosci Res 2014
92
4

Microglial M1/M2 polarization and metabolic states.
Ruben Orihuela, Christopher A McPherson, Gaylia Jean Harry. Br J Pharmacol 2016
607
4

TREM2 Regulates Microglial Cholesterol Metabolism upon Chronic Phagocytic Challenge.
Alicia A Nugent, Karin Lin, Bettina van Lengerich, Steve Lianoglou, Laralynne Przybyla, Sonnet S Davis, Ceyda Llapashtica, Junhua Wang, Do Jin Kim, Dan Xia,[...]. Neuron 2020
94
4


Synapse-specific astrocyte gating of amygdala-related behavior.
Mario Martin-Fernandez, Stephanie Jamison, Laurie M Robin, Zhe Zhao, Eduardo D Martin, Juan Aguilar, Michael A Benneyworth, Giovanni Marsicano, Alfonso Araque. Nat Neurosci 2017
97
4


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.