A citation-based method for searching scientific literature

Shimpei Gotoh, Isao Ito, Tadao Nagasaki, Yuki Yamamoto, Satoshi Konishi, Yohei Korogi, Hisako Matsumoto, Shigeo Muro, Toyohiro Hirai, Michinori Funato, Shin-Ichi Mae, Taro Toyoda, Aiko Sato-Otsubo, Seishi Ogawa, Kenji Osafune, Michiaki Mishima. Stem Cell Reports 2014
Times Cited: 110







List of co-cited articles
1084 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


In vitro generation of human pluripotent stem cell derived lung organoids.
Briana R Dye, David R Hill, Michael A H Ferguson, Yu-Hwai Tsai, Melinda S Nagy, Rachel Dyal, James M Wells, Christopher N Mayhew, Roy Nattiv, Ophir D Klein,[...]. Elife 2015
356
60

Efficient generation of lung and airway epithelial cells from human pluripotent stem cells.
Sarah X L Huang, Mohammad Naimul Islam, John O'Neill, Zheng Hu, Yong-Guang Yang, Ya-Wen Chen, Melanie Mumau, Michael D Green, Gordana Vunjak-Novakovic, Jahar Bhattacharya,[...]. Nat Biotechnol 2014
312
58

Differentiation of Human Pluripotent Stem Cells into Functional Lung Alveolar Epithelial Cells.
Anjali Jacob, Michael Morley, Finn Hawkins, Katherine B McCauley, J C Jean, Hillary Heins, Cheng-Lun Na, Timothy E Weaver, Marall Vedaie, Killian Hurley,[...]. Cell Stem Cell 2017
165
56

Efficient Derivation of Functional Human Airway Epithelium from Pluripotent Stem Cells via Temporal Regulation of Wnt Signaling.
Katherine B McCauley, Finn Hawkins, Maria Serra, Dylan C Thomas, Anjali Jacob, Darrell N Kotton. Cell Stem Cell 2017
165
53

Directed Induction of Functional Multi-ciliated Cells in Proximal Airway Epithelial Spheroids from Human Pluripotent Stem Cells.
Satoshi Konishi, Shimpei Gotoh, Kazuhiro Tateishi, Yuki Yamamoto, Yohei Korogi, Tadao Nagasaki, Hisako Matsumoto, Shigeo Muro, Toyohiro Hirai, Isao Ito,[...]. Stem Cell Reports 2016
90
52

A three-dimensional model of human lung development and disease from pluripotent stem cells.
Ya-Wen Chen, Sarah Xuelian Huang, Ana Luisa Rodrigues Toste de Carvalho, Siu-Hong Ho, Mohammad Naimul Islam, Stefano Volpi, Luigi D Notarangelo, Michael Ciancanelli, Jean-Laurent Casanova, Jahar Bhattacharya,[...]. Nat Cell Biol 2017
216
47

Type 2 alveolar cells are stem cells in adult lung.
Christina E Barkauskas, Michael J Cronce, Craig R Rackley, Emily J Bowie, Douglas R Keene, Barry R Stripp, Scott H Randell, Paul W Noble, Brigid L M Hogan. J Clin Invest 2013
733
44

Generation of anterior foregut endoderm from human embryonic and induced pluripotent stem cells.
Michael D Green, Antonia Chen, Maria-Cristina Nostro, Sunita L d'Souza, Christoph Schaniel, Ihor R Lemischka, Valerie Gouon-Evans, Gordon Keller, Hans-Willem Snoeck. Nat Biotechnol 2011
215
43

Long-term expansion of alveolar stem cells derived from human iPS cells in organoids.
Yuki Yamamoto, Shimpei Gotoh, Yohei Korogi, Masahide Seki, Satoshi Konishi, Satoshi Ikeo, Naoyuki Sone, Tadao Nagasaki, Hisako Matsumoto, Shigeo Muro,[...]. Nat Methods 2017
90
47

Directed differentiation of human pluripotent stem cells into mature airway epithelia expressing functional CFTR protein.
Amy P Wong, Christine E Bear, Stephanie Chin, Peter Pasceri, Tadeo O Thompson, Ling-Jun Huan, Felix Ratjen, James Ellis, Janet Rossant. Nat Biotechnol 2012
233
40

Prospective isolation of NKX2-1-expressing human lung progenitors derived from pluripotent stem cells.
Finn Hawkins, Philipp Kramer, Anjali Jacob, Ian Driver, Dylan C Thomas, Katherine B McCauley, Nicholas Skvir, Ana M Crane, Anita A Kurmann, Anthony N Hollenberg,[...]. J Clin Invest 2017
76
48

Basal cells as stem cells of the mouse trachea and human airway epithelium.
Jason R Rock, Mark W Onaitis, Emma L Rawlins, Yun Lu, Cheryl P Clark, Yan Xue, Scott H Randell, Brigid L M Hogan. Proc Natl Acad Sci U S A 2009
835
35

Generation of multiciliated cells in functional airway epithelia from human induced pluripotent stem cells.
Amy L Firth, Carl T Dargitz, Susan J Qualls, Tushar Menon, Rebecca Wright, Oded Singer, Fred H Gage, Ajai Khanna, Inder M Verma. Proc Natl Acad Sci U S A 2014
129
35

Efficient derivation of purified lung and thyroid progenitors from embryonic stem cells.
Tyler A Longmire, Laertis Ikonomou, Finn Hawkins, Constantina Christodoulou, Yuxia Cao, J C Jean, Letty W Kwok, Hongmei Mou, Jayaraj Rajagopal, Steven S Shen,[...]. Cell Stem Cell 2012
233
34

In Vitro Induction and In Vivo Engraftment of Lung Bud Tip Progenitor Cells Derived from Human Pluripotent Stem Cells.
Alyssa J Miller, David R Hill, Melinda S Nagy, Yoshiro Aoki, Briana R Dye, Alana M Chin, Sha Huang, Felix Zhu, Eric S White, Vibha Lama,[...]. Stem Cell Reports 2018
75
40

Generation of multipotent lung and airway progenitors from mouse ESCs and patient-specific cystic fibrosis iPSCs.
Hongmei Mou, Rui Zhao, Richard Sherwood, Tim Ahfeldt, Allen Lapey, John Wain, Leonard Sicilian, Konstantin Izvolsky, Kiran Musunuru, Chad Cowan,[...]. Cell Stem Cell 2012
192
29

The in vitro generation of lung and airway progenitor cells from human pluripotent stem cells.
Sarah X L Huang, Michael D Green, Ana Toste de Carvalho, Melanie Mumau, Ya-Wen Chen, Sunita L D'Souza, Hans-Willem Snoeck. Nat Protoc 2015
94
30


Human embryonic lung epithelial tips are multipotent progenitors that can be expanded in vitro as long-term self-renewing organoids.
Marko Z Nikolić, Oriol Caritg, Quitz Jeng, Jo-Anne Johnson, Dawei Sun, Kate J Howell, Jane L Brady, Usua Laresgoiti, George Allen, Richard Butler,[...]. Elife 2017
95
27

A bioengineered niche promotes in vivo engraftment and maturation of pluripotent stem cell derived human lung organoids.
Briana R Dye, Priya H Dedhia, Alyssa J Miller, Melinda S Nagy, Eric S White, Lonnie D Shea, Jason R Spence. Elife 2016
95
26

Alveolar progenitor and stem cells in lung development, renewal and cancer.
Tushar J Desai, Douglas G Brownfield, Mark A Krasnow. Nature 2014
459
24

Dual SMAD Signaling Inhibition Enables Long-Term Expansion of Diverse Epithelial Basal Cells.
Hongmei Mou, Vladimir Vinarsky, Purushothama Rao Tata, Karissa Brazauskas, Soon H Choi, Adrianne K Crooke, Bing Zhang, George M Solomon, Brett Turner, Hermann Bihler,[...]. Cell Stem Cell 2016
161
22

Identification of bronchioalveolar stem cells in normal lung and lung cancer.
Carla F Bender Kim, Erica L Jackson, Amber E Woolfenden, Sharon Lawrence, Imran Babar, Sinae Vogel, Denise Crowley, Roderick T Bronson, Tyler Jacks. Cell 2005
21

Human iPS cell-derived alveolar epithelium repopulates lung extracellular matrix.
Mahboobe Ghaedi, Elizabeth A Calle, Julio J Mendez, Ashley L Gard, Jenna Balestrini, Adam Booth, Peter F Bove, Liqiong Gui, Eric S White, Laura E Niklason. J Clin Invest 2013
151
21

Regeneration of the lung alveolus by an evolutionarily conserved epithelial progenitor.
William J Zacharias, David B Frank, Jarod A Zepp, Michael P Morley, Farrah A Alkhaleel, Jun Kong, Su Zhou, Edward Cantu, Edward E Morrisey. Nature 2018
237
21

Induction of pluripotent stem cells from adult human fibroblasts by defined factors.
Kazutoshi Takahashi, Koji Tanabe, Mari Ohnuki, Megumi Narita, Tomoko Ichisaka, Kiichiro Tomoda, Shinya Yamanaka. Cell 2007
20

Generation of lung organoids from human pluripotent stem cells in vitro.
Alyssa J Miller, Briana R Dye, Daysha Ferrer-Torres, David R Hill, Arend W Overeem, Lonnie D Shea, Jason R Spence. Nat Protoc 2019
103
20

Modeling of Fibrotic Lung Disease Using 3D Organoids Derived from Human Pluripotent Stem Cells.
Alexandros Strikoudis, Anna Cieślak, Lucas Loffredo, Ya-Wen Chen, Nina Patel, Anjali Saqi, David J Lederer, Hans-Willem Snoeck. Cell Rep 2019
61
31

In Vitro Disease Modeling of Hermansky-Pudlak Syndrome Type 2 Using Human Induced Pluripotent Stem Cell-Derived Alveolar Organoids.
Yohei Korogi, Shimpei Gotoh, Satoshi Ikeo, Yuki Yamamoto, Naoyuki Sone, Koji Tamai, Satoshi Konishi, Tadao Nagasaki, Hisako Matsumoto, Isao Ito,[...]. Stem Cell Reports 2019
33
57


Notch-dependent differentiation of adult airway basal stem cells.
Jason R Rock, Xia Gao, Yan Xue, Scott H Randell, Young-Yun Kong, Brigid L M Hogan. Cell Stem Cell 2011
265
18

Lung stem cell differentiation in mice directed by endothelial cells via a BMP4-NFATc1-thrombospondin-1 axis.
Joo-Hyeon Lee, Dong Ha Bhang, Alexander Beede, Tian Lian Huang, Barry R Stripp, Kenneth D Bloch, Amy J Wagers, Yu-Hua Tseng, Sandra Ryeom, Carla F Kim. Cell 2014
237
17

Efficient differentiation of human embryonic stem cells to definitive endoderm.
Kevin A D'Amour, Alan D Agulnick, Susan Eliazer, Olivia G Kelly, Evert Kroon, Emmanuel E Baetge. Nat Biotechnol 2005
17

Airway basal stem cells: a perspective on their roles in epithelial homeostasis and remodeling.
Jason R Rock, Scott H Randell, Brigid L M Hogan. Dis Model Mech 2010
390
16

Repair and regeneration of the respiratory system: complexity, plasticity, and mechanisms of lung stem cell function.
Brigid L M Hogan, Christina E Barkauskas, Harold A Chapman, Jonathan A Epstein, Rajan Jain, Connie C W Hsia, Laura Niklason, Elizabeth Calle, Andrew Le, Scott H Randell,[...]. Cell Stem Cell 2014
425
16

The Id2+ distal tip lung epithelium contains individual multipotent embryonic progenitor cells.
Emma L Rawlins, Cheryl P Clark, Yan Xue, Brigid L M Hogan. Development 2009
224
16


Pluripotent stem cell differentiation reveals distinct developmental pathways regulating lung- versus thyroid-lineage specification.
Maria Serra, Konstantinos-Dionysios Alysandratos, Finn Hawkins, Katherine B McCauley, Anjali Jacob, Jinyoung Choi, Ignacio S Caballero, Marall Vedaie, Anita A Kurmann, Laertis Ikonomou,[...]. Development 2017
36
44

The role of Scgb1a1+ Clara cells in the long-term maintenance and repair of lung airway, but not alveolar, epithelium.
Emma L Rawlins, Tadashi Okubo, Yan Xue, David M Brass, Richard L Auten, Hiroshi Hasegawa, Fan Wang, Brigid L M Hogan. Cell Stem Cell 2009
499
15

Lineage-negative progenitors mobilize to regenerate lung epithelium after major injury.
Andrew E Vaughan, Alexis N Brumwell, Ying Xi, Jeffrey E Gotts, Doug G Brownfield, Barbara Treutlein, Kevin Tan, Victor Tan, Feng Chun Liu, Mark R Looney,[...]. Nature 2015
322
15

Dedifferentiation of committed epithelial cells into stem cells in vivo.
Purushothama Rao Tata, Hongmei Mou, Ana Pardo-Saganta, Rui Zhao, Mythili Prabhu, Brandon M Law, Vladimir Vinarsky, Josalyn L Cho, Sylvie Breton, Amar Sahay,[...]. Nature 2013
375
15

Reconstructing lineage hierarchies of the distal lung epithelium using single-cell RNA-seq.
Barbara Treutlein, Doug G Brownfield, Angela R Wu, Norma F Neff, Gary L Mantalas, F Hernan Espinoza, Tushar J Desai, Mark A Krasnow, Stephen R Quake. Nature 2014
745
15

Emergence of a Wave of Wnt Signaling that Regulates Lung Alveologenesis by Controlling Epithelial Self-Renewal and Differentiation.
David B Frank, Tien Peng, Jarod A Zepp, Melinda Snitow, Tiffaney L Vincent, Ian J Penkala, Zheng Cui, Michael J Herriges, Michael P Morley, Su Zhou,[...]. Cell Rep 2016
99
15

Single-cell Wnt signaling niches maintain stemness of alveolar type 2 cells.
Ahmad N Nabhan, Douglas G Brownfield, Pehr B Harbury, Mark A Krasnow, Tushar J Desai. Science 2018
242
15

Directed differentiation of human pluripotent stem cells into intestinal tissue in vitro.
Jason R Spence, Christopher N Mayhew, Scott A Rankin, Matthew F Kuhar, Jefferson E Vallance, Kathryn Tolle, Elizabeth E Hoskins, Vladimir V Kalinichenko, Susanne I Wells, Aaron M Zorn,[...]. Nature 2011
980
14

Modelling human development and disease in pluripotent stem-cell-derived gastric organoids.
Kyle W McCracken, Emily M Catá, Calyn M Crawford, Katie L Sinagoga, Michael Schumacher, Briana E Rockich, Yu-Hwai Tsai, Christopher N Mayhew, Jason R Spence, Yana Zavros,[...]. Nature 2014
475
14

Distal airway stem cells yield alveoli in vitro and during lung regeneration following H1N1 influenza infection.
Pooja A Kumar, Yuanyu Hu, Yusuke Yamamoto, Neo Boon Hoe, Tay Seok Wei, Dakai Mu, Yan Sun, Lim Siew Joo, Rania Dagher, Elisabeth M Zielonka,[...]. Cell 2011
341
14

Targeted correction and restored function of the CFTR gene in cystic fibrosis induced pluripotent stem cells.
Ana M Crane, Philipp Kramer, Jacquelin H Bui, Wook Joon Chung, Xuan Shirley Li, Manuel L Gonzalez-Garay, Finn Hawkins, Wei Liao, Daniela Mora, Sangbum Choi,[...]. Stem Cell Reports 2015
106
14

Single-Cell Transcriptomic Profiling of Pluripotent Stem Cell-Derived SCGB3A2+ Airway Epithelium.
Katherine B McCauley, Konstantinos-Dionysios Alysandratos, Anjali Jacob, Finn Hawkins, Ignacio S Caballero, Marall Vedaie, Wenli Yang, Katherine J Slovik, Michael Morley, Gianni Carraro,[...]. Stem Cell Reports 2018
32
43

A single-cell atlas of the airway epithelium reveals the CFTR-rich pulmonary ionocyte.
Lindsey W Plasschaert, Rapolas Žilionis, Rayman Choo-Wing, Virginia Savova, Judith Knehr, Guglielmo Roma, Allon M Klein, Aron B Jaffe. Nature 2018
339
14


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.