A citation-based method for searching scientific literature

Matthew J Yousefzadeh, David W Wyatt, Kei-Ichi Takata, Yunxiang Mu, Sean C Hensley, Junya Tomida, Göran O Bylund, Sylvie Doublié, Erik Johansson, Dale A Ramsden, Kevin M McBride, Richard D Wood. PLoS Genet 2014
Times Cited: 150







List of co-cited articles
1179 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Mammalian polymerase θ promotes alternative NHEJ and suppresses recombination.
Pedro A Mateos-Gomez, Fade Gong, Nidhi Nair, Kyle M Miller, Eros Lazzerini-Denchi, Agnel Sfeir. Nature 2015
356
66

Homologous-recombination-deficient tumours are dependent on Polθ-mediated repair.
Raphael Ceccaldi, Jessica C Liu, Ravindra Amunugama, Ildiko Hajdu, Benjamin Primack, Mark I R Petalcorin, Kevin W O'Connor, Panagiotis A Konstantinopoulos, Stephen J Elledge, Simon J Boulton,[...]. Nature 2015
416
60

Essential Roles for Polymerase θ-Mediated End Joining in the Repair of Chromosome Breaks.
David W Wyatt, Wanjuan Feng, Michael P Conlin, Matthew J Yousefzadeh, Steven A Roberts, Piotr Mieczkowski, Richard D Wood, Gaorav P Gupta, Dale A Ramsden. Mol Cell 2016
131
53

Mechanism of microhomology-mediated end-joining promoted by human DNA polymerase θ.
Tatiana Kent, Gurushankar Chandramouly, Shane Michael McDevitt, Ahmet Y Ozdemir, Richard T Pomerantz. Nat Struct Mol Biol 2015
171
40

DNA polymerase θ (POLQ), double-strand break repair, and cancer.
Richard D Wood, Sylvie Doublié. DNA Repair (Amst) 2016
111
36


The helicase domain of Polθ counteracts RPA to promote alt-NHEJ.
Pedro A Mateos-Gomez, Tatiana Kent, Sarah K Deng, Shane McDevitt, Ekaterina Kashkina, Trung M Hoang, Richard T Pomerantz, Agnel Sfeir. Nat Struct Mol Biol 2017
75
40


A Polymerase Theta-dependent repair pathway suppresses extensive genomic instability at endogenous G4 DNA sites.
Wouter Koole, Robin van Schendel, Andrea E Karambelas, Jane T van Heteren, Kristy L Okihara, Marcel Tijsterman. Nat Commun 2014
137
27

POLQ (Pol theta), a DNA polymerase and DNA-dependent ATPase in human cells.
Mineaki Seki, Federica Marini, Richard D Wood. Nucleic Acids Res 2003
131
26

Human DNA polymerase θ grasps the primer terminus to mediate DNA repair.
Karl E Zahn, April M Averill, Pierre Aller, Richard D Wood, Sylvie Doublié. Nat Struct Mol Biol 2015
77
31

Microhomology-mediated End Joining and Homologous Recombination share the initial end resection step to repair DNA double-strand breaks in mammalian cells.
Lan N Truong, Yongjiang Li, Linda Z Shi, Patty Yi-Hwa Hwang, Jing He, Hailong Wang, Niema Razavian, Michael W Berns, Xiaohua Wu. Proc Natl Acad Sci U S A 2013
273
21

DNA polymerase theta up-regulation is associated with poor survival in breast cancer, perturbs DNA replication, and promotes genetic instability.
Fanny Lemée, Valérie Bergoglio, Anne Fernandez-Vidal, Alice Machado-Silva, Marie-Jeanne Pillaire, Anne Bieth, Catherine Gentil, Lee Baker, Anne-Laure Martin, Claire Leduc,[...]. Proc Natl Acad Sci U S A 2010
108
21


Polymerase θ is a robust terminal transferase that oscillates between three different mechanisms during end-joining.
Tatiana Kent, Pedro A Mateos-Gomez, Agnel Sfeir, Richard T Pomerantz. Elife 2016
48
41

Polymerase theta-mediated end joining of replication-associated DNA breaks in C. elegans.
Sophie F Roerink, Robin van Schendel, Marcel Tijsterman. Genome Res 2014
93
21

Structure of the Helicase Domain of DNA Polymerase Theta Reveals a Possible Role in the Microhomology-Mediated End-Joining Pathway.
Joseph A Newman, Christopher D O Cooper, Hazel Aitkenhead, Opher Gileadi. Structure 2015
43
46

Non-homologous DNA end joining and alternative pathways to double-strand break repair.
Howard H Y Chang, Nicholas R Pannunzio, Noritaka Adachi, Michael R Lieber. Nat Rev Mol Cell Biol 2017
632
20

Inactivation of Pol θ and C-NHEJ eliminates off-target integration of exogenous DNA.
Alex N Zelensky, Joost Schimmel, Hanneke Kool, Roland Kanaar, Marcel Tijsterman. Nat Commun 2017
64
29

Genetic determinants of cellular addiction to DNA polymerase theta.
Wanjuan Feng, Dennis A Simpson, Juan Carvajal-Garcia, Brandon A Price, Rashmi J Kumar, Lisle E Mose, Richard D Wood, Naim Rashid, Jeremy E Purvis, Joel S Parker,[...]. Nat Commun 2019
53
35

Mechanistic basis for microhomology identification and genome scarring by polymerase theta.
Juan Carvajal-Garcia, Jang-Eun Cho, Pablo Carvajal-Garcia, Wanjuan Feng, Richard D Wood, Jeff Sekelsky, Gaorav P Gupta, Steven A Roberts, Dale A Ramsden. Proc Natl Acad Sci U S A 2020
43
44

DNA ligase III promotes alternative nonhomologous end-joining during chromosomal translocation formation.
Deniz Simsek, Erika Brunet, Sunnie Yan-Wai Wong, Sachin Katyal, Yankun Gao, Peter J McKinnon, Jacqueline Lou, Lei Zhang, James Li, Edward J Rebar,[...]. PLoS Genet 2011
200
17

DNA Polymerase θ: A Unique Multifunctional End-Joining Machine.
Samuel J Black, Ekaterina Kashkina, Tatiana Kent, Richard T Pomerantz. Genes (Basel) 2016
46
36

Drosophila DNA polymerase theta utilizes both helicase-like and polymerase domains during microhomology-mediated end joining and interstrand crosslink repair.
Kelly Beagan, Robin L Armstrong, Alice Witsell, Upasana Roy, Nikolai Renedo, Amy E Baker, Orlando D Schärer, Mitch McVey. PLoS Genet 2017
29
58


IgH class switching and translocations use a robust non-classical end-joining pathway.
Catherine T Yan, Cristian Boboila, Ellen Kris Souza, Sonia Franco, Thomas R Hickernell, Michael Murphy, Sunil Gumaste, Mark Geyer, Ali A Zarrin, John P Manis,[...]. Nature 2007
433
16

Lack of DNA polymerase theta (POLQ) radiosensitizes bone marrow stromal cells in vitro and increases reticulocyte micronuclei after total-body irradiation.
Julie P Goff, Donna S Shields, Mineaki Seki, Serah Choi, Michael W Epperly, Tracy Dixon, Hong Wang, Christopher J Bakkenist, Stephen D Dertinger, Dorothea K Torous,[...]. Radiat Res 2009
48
33

Mutational signatures of non-homologous and polymerase theta-mediated end-joining in embryonic stem cells.
Joost Schimmel, Hanneke Kool, Robin van Schendel, Marcel Tijsterman. EMBO J 2017
61
26

Low-fidelity DNA synthesis by human DNA polymerase theta.
Mercedes E Arana, Mineaki Seki, Richard D Wood, Igor B Rogozin, Thomas A Kunkel. Nucleic Acids Res 2008
95
15

DNA polymerase theta is preferentially expressed in lymphoid tissues and upregulated in human cancers.
Kiyoko Kawamura, Rumana Bahar, Mika Seimiya, Masako Chiyo, Akihiko Wada, Seiji Okada, Masahiko Hatano, Takeshi Tokuhisa, Hideki Kimura, Satoshi Watanabe,[...]. Int J Cancer 2004
88
17

Lesion bypass activity of DNA polymerase θ (POLQ) is an intrinsic property of the pol domain and depends on unique sequence inserts.
Matthew Hogg, Mineaki Seki, Richard D Wood, Sylvie Doublié, Susan S Wallace. J Mol Biol 2011
60
25

DNA polymerase θ (POLQ) is important for repair of DNA double-strand breaks caused by fork collapse.
Zi Wang, Yadong Song, Shibo Li, Sunil Kurian, Rong Xiang, Takuya Chiba, Xiaohua Wu. J Biol Chem 2019
41
36

High-efficiency bypass of DNA damage by human DNA polymerase Q.
Mineaki Seki, Chikahide Masutani, Lee Wei Yang, Anthony Schuffert, Shigenori Iwai, Ivet Bahar, Richard D Wood. EMBO J 2004
147
14

Repair Pathway Choices and Consequences at the Double-Strand Break.
Raphael Ceccaldi, Beatrice Rondinelli, Alan D D'Andrea. Trends Cell Biol 2016
715
14


Regulation of Single-Strand Annealing and its Role in Genome Maintenance.
Ragini Bhargava, David O Onyango, Jeremy M Stark. Trends Genet 2016
208
14

A small interfering RNA screen of genes involved in DNA repair identifies tumor-specific radiosensitization by POLQ knockdown.
Geoff S Higgins, Remko Prevo, Yin-Fai Lee, Thomas Helleday, Ruth J Muschel, Steve Taylor, Michio Yoshimura, Ian D Hickson, Eric J Bernhard, W Gillies McKenna. Cancer Res 2010
79
17

Dual loss of human POLQ and LIG4 abolishes random integration.
Shinta Saito, Ryo Maeda, Noritaka Adachi. Nat Commun 2017
45
31

Templated Insertions: A Smoking Gun for Polymerase Theta-Mediated End Joining.
Joost Schimmel, Robin van Schendel, Johan T den Dunnen, Marcel Tijsterman. Trends Genet 2019
46
30


Alternative-NHEJ is a mechanistically distinct pathway of mammalian chromosome break repair.
Nicole Bennardo, Anita Cheng, Nick Huang, Jeremy M Stark. PLoS Genet 2008
554
13

T-DNA integration in plants results from polymerase-θ-mediated DNA repair.
Maartje van Kregten, Sylvia de Pater, Ron Romeijn, Robin van Schendel, Paul J J Hooykaas, Marcel Tijsterman. Nat Plants 2016
75
17

Beyond PARP-POLθ as an anticancer target.
Geoff S Higgins, Simon J Boulton. Science 2018
34
38


Genomic Scars Generated by Polymerase Theta Reveal the Versatile Mechanism of Alternative End-Joining.
Robin van Schendel, Jane van Heteren, Richard Welten, Marcel Tijsterman. PLoS Genet 2016
33
36

Overexpression of POLQ confers a poor prognosis in early breast cancer patients.
Geoff S Higgins, Adrian L Harris, Remko Prevo, Thomas Helleday, W Gillies McKenna, Francesca M Buffa. Oncotarget 2010
68
17

Promiscuous DNA synthesis by human DNA polymerase θ.
Matthew Hogg, A Elisabeth Sauer-Eriksson, Erik Johansson. Nucleic Acids Res 2012
44
27

53BP1 inhibits homologous recombination in Brca1-deficient cells by blocking resection of DNA breaks.
Samuel F Bunting, Elsa Callén, Nancy Wong, Hua-Tang Chen, Federica Polato, Amanda Gunn, Anne Bothmer, Niklas Feldhahn, Oscar Fernandez-Capetillo, Liu Cao,[...]. Cell 2010
12

Molecular basis of microhomology-mediated end-joining by purified full-length Polθ.
Samuel J Black, Ahmet Y Ozdemir, Ekaterina Kashkina, Tatiana Kent, Timur Rusanov, Dejan Ristic, Yeonoh Shin, Antonio Suma, Trung Hoang, Gurushankar Chandramouly,[...]. Nat Commun 2019
26
46

Alternative end-joining catalyzes class switch recombination in the absence of both Ku70 and DNA ligase 4.
Cristian Boboila, Catherine Yan, Duane R Wesemann, Mila Jankovic, Jing H Wang, John Manis, Andre Nussenzweig, Michel Nussenzweig, Frederick W Alt. J Exp Med 2010
123
11


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.