A citation-based method for searching scientific literature

Christopher D McFarland, Leonid A Mirny, Kirill S Korolev. Proc Natl Acad Sci U S A 2014
Times Cited: 79







List of co-cited articles
768 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Impact of deleterious passenger mutations on cancer progression.
Christopher D McFarland, Kirill S Korolev, Gregory V Kryukov, Shamil R Sunyaev, Leonid A Mirny. Proc Natl Acad Sci U S A 2013
184
56

Accumulation of driver and passenger mutations during tumor progression.
Ivana Bozic, Tibor Antal, Hisashi Ohtsuki, Hannah Carter, Dewey Kim, Sining Chen, Rachel Karchin, Kenneth W Kinzler, Bert Vogelstein, Martin A Nowak. Proc Natl Acad Sci U S A 2010
469
36

Hallmarks of cancer: the next generation.
Douglas Hanahan, Robert A Weinberg. Cell 2011
26

Cancer genome landscapes.
Bert Vogelstein, Nickolas Papadopoulos, Victor E Velculescu, Shibin Zhou, Luis A Diaz, Kenneth W Kinzler. Science 2013
25


A Big Bang model of human colorectal tumor growth.
Andrea Sottoriva, Haeyoun Kang, Zhicheng Ma, Trevor A Graham, Matthew P Salomon, Junsong Zhao, Paul Marjoram, Kimberly Siegmund, Michael F Press, Darryl Shibata,[...]. Nat Genet 2015
588
22

Mutational heterogeneity in cancer and the search for new cancer-associated genes.
Michael S Lawrence, Petar Stojanov, Paz Polak, Gregory V Kryukov, Kristian Cibulskis, Andrey Sivachenko, Scott L Carter, Chip Stewart, Craig H Mermel, Steven A Roberts,[...]. Nature 2013
22

Intratumor heterogeneity and branched evolution revealed by multiregion sequencing.
Marco Gerlinger, Andrew J Rowan, Stuart Horswell, M Math, James Larkin, David Endesfelder, Eva Gronroos, Pierre Martinez, Nicholas Matthews, Aengus Stewart,[...]. N Engl J Med 2012
18

Identification of neutral tumor evolution across cancer types.
Marc J Williams, Benjamin Werner, Chris P Barnes, Trevor A Graham, Andrea Sottoriva. Nat Genet 2016
316
18

Signatures of mutational processes in human cancer.
Ludmil B Alexandrov, Serena Nik-Zainal, David C Wedge, Samuel A J R Aparicio, Sam Behjati, Andrew V Biankin, Graham R Bignell, Niccolò Bolli, Ake Borg, Anne-Lise Børresen-Dale,[...]. Nature 2013
15

Defining stem cell dynamics in models of intestinal tumor initiation.
Louis Vermeulen, Edward Morrissey, Maartje van der Heijden, Anna M Nicholson, Andrea Sottoriva, Simon Buczacki, Richard Kemp, Simon Tavaré, Douglas J Winton. Science 2013
260
15

The Damaging Effect of Passenger Mutations on Cancer Progression.
Christopher D McFarland, Julia A Yaglom, Jonathan W Wojtkowiak, Jacob G Scott, David L Morse, Michael Y Sherman, Leonid A Mirny. Cancer Res 2017
47
25

The cancer genome.
Michael R Stratton, Peter J Campbell, P Andrew Futreal. Nature 2009
13

Clonal evolution in cancer.
Mel Greaves, Carlo C Maley. Nature 2012
13

Pan-cancer analysis of the extent and consequences of intratumor heterogeneity.
Noemi Andor, Trevor A Graham, Marnix Jansen, Li C Xia, C Athena Aktipis, Claudia Petritsch, Hanlee P Ji, Carlo C Maley. Nat Med 2016
440
13

Universal Patterns of Selection in Cancer and Somatic Tissues.
Iñigo Martincorena, Keiran M Raine, Moritz Gerstung, Kevin J Dawson, Kerstin Haase, Peter Van Loo, Helen Davies, Michael R Stratton, Peter J Campbell. Cell 2017
519
13

Genetic progression and the waiting time to cancer.
Niko Beerenwinkel, Tibor Antal, David Dingli, Arne Traulsen, Kenneth W Kinzler, Victor E Velculescu, Bert Vogelstein, Martin A Nowak. PLoS Comput Biol 2007
244
12

Only three driver gene mutations are required for the development of lung and colorectal cancers.
Cristian Tomasetti, Luigi Marchionni, Martin A Nowak, Giovanni Parmigiani, Bert Vogelstein. Proc Natl Acad Sci U S A 2015
222
11

Tumor evolution. High burden and pervasive positive selection of somatic mutations in normal human skin.
Iñigo Martincorena, Amit Roshan, Moritz Gerstung, Peter Ellis, Peter Van Loo, Stuart McLaren, David C Wedge, Anthony Fullam, Ludmil B Alexandrov, Jose M Tubio,[...]. Science 2015
900
11


A spatial model predicts that dispersal and cell turnover limit intratumour heterogeneity.
Bartlomiej Waclaw, Ivana Bozic, Meredith E Pittman, Ralph H Hruban, Bert Vogelstein, Martin A Nowak. Nature 2015
275
10

The hallmarks of cancer.
D Hanahan, R A Weinberg. Cell 2000
10

Mutational landscape and significance across 12 major cancer types.
Cyriac Kandoth, Michael D McLellan, Fabio Vandin, Kai Ye, Beifang Niu, Charles Lu, Mingchao Xie, Qunyuan Zhang, Joshua F McMichael, Matthew A Wyczalkowski,[...]. Nature 2013
10

A census of human cancer genes.
P Andrew Futreal, Lachlan Coin, Mhairi Marshall, Thomas Down, Timothy Hubbard, Richard Wooster, Nazneen Rahman, Michael R Stratton. Nat Rev Cancer 2004
10

The causes and consequences of genetic heterogeneity in cancer evolution.
Rebecca A Burrell, Nicholas McGranahan, Jiri Bartek, Charles Swanton. Nature 2013
10

Paradoxical relationship between chromosomal instability and survival outcome in cancer.
Nicolai J Birkbak, Aron C Eklund, Qiyuan Li, Sarah E McClelland, David Endesfelder, Patrick Tan, Iain B Tan, Andrea L Richardson, Zoltan Szallasi, Charles Swanton. Cancer Res 2011
221
10

Cancer evolution: mathematical models and computational inference.
Niko Beerenwinkel, Roland F Schwarz, Moritz Gerstung, Florian Markowetz. Syst Biol 2015
155
8

Evolutionary dynamics of cancer in response to targeted combination therapy.
Ivana Bozic, Johannes G Reiter, Benjamin Allen, Tibor Antal, Krishnendu Chatterjee, Preya Shah, Yo Sup Moon, Amin Yaqubie, Nicole Kelly, Dung T Le,[...]. Elife 2013
367
8

Patterns of somatic mutation in human cancer genomes.
Christopher Greenman, Philip Stephens, Raffaella Smith, Gillian L Dalgliesh, Christopher Hunter, Graham Bignell, Helen Davies, Jon Teague, Adam Butler, Claire Stevens,[...]. Nature 2007
8

A new theory on cancer-inducing mechanism.
C O NORDLING. Br J Cancer 1953
470
8


Mutation and cancer: statistical study of retinoblastoma.
A G Knudson. Proc Natl Acad Sci U S A 1971
8

Stochastic dynamics of cancer initiation.
Jasmine Foo, Kevin Leder, Franziska Michor. Phys Biol 2011
34
20


Modelling the evolution of genetic instability during tumour progression.
Ruchira S Datta, Alice Gutteridge, Charles Swanton, Carlo C Maley, Trevor A Graham. Evol Appl 2013
31
22

Discovery and saturation analysis of cancer genes across 21 tumour types.
Michael S Lawrence, Petar Stojanov, Craig H Mermel, James T Robinson, Levi A Garraway, Todd R Golub, Matthew Meyerson, Stacey B Gabriel, Eric S Lander, Gad Getz. Nature 2014
8

Cumulative haploinsufficiency and triplosensitivity drive aneuploidy patterns and shape the cancer genome.
Teresa Davoli, Andrew Wei Xu, Kristen E Mengwasser, Laura M Sack, John C Yoon, Peter J Park, Stephen J Elledge. Cell 2013
460
8

Massive genomic rearrangement acquired in a single catastrophic event during cancer development.
Philip J Stephens, Chris D Greenman, Beiyuan Fu, Fengtang Yang, Graham R Bignell, Laura J Mudie, Erin D Pleasance, King Wai Lau, David Beare, Lucy A Stebbings,[...]. Cell 2011
8

Clonal evolution in relapsed acute myeloid leukaemia revealed by whole-genome sequencing.
Li Ding, Timothy J Ley, David E Larson, Christopher A Miller, Daniel C Koboldt, John S Welch, Julie K Ritchey, Margaret A Young, Tamara Lamprecht, Michael D McLellan,[...]. Nature 2012
8

Quantifying Clonal and Subclonal Passenger Mutations in Cancer Evolution.
Ivana Bozic, Jeffrey M Gerold, Martin A Nowak. PLoS Comput Biol 2016
66
10


Quantification of subclonal selection in cancer from bulk sequencing data.
Marc J Williams, Benjamin Werner, Timon Heide, Christina Curtis, Chris P Barnes, Andrea Sottoriva, Trevor A Graham. Nat Genet 2018
116
8

MULLER'S RATCHET AND MUTATIONAL MELTDOWNS.
W Gabriel, M Lynch, R Bürger. Evolution 1993
180
7



Quantitative evolutionary dynamics using high-resolution lineage tracking.
Sasha F Levy, Jamie R Blundell, Sandeep Venkataram, Dmitri A Petrov, Daniel S Fisher, Gavin Sherlock. Nature 2015
199
7

Comparative lesion sequencing provides insights into tumor evolution.
Siân Jones, Wei-Dong Chen, Giovanni Parmigiani, Frank Diehl, Niko Beerenwinkel, Tibor Antal, Arne Traulsen, Martin A Nowak, Christopher Siegel, Victor E Velculescu,[...]. Proc Natl Acad Sci U S A 2008
565
7

Spatial and temporal diversity in genomic instability processes defines lung cancer evolution.
Elza C de Bruin, Nicholas McGranahan, Richard Mitter, Max Salm, David C Wedge, Lucy Yates, Mariam Jamal-Hanjani, Seema Shafi, Nirupa Murugaesu, Andrew J Rowan,[...]. Science 2014
722
7

Genetic basis for clinical response to CTLA-4 blockade in melanoma.
Alexandra Snyder, Vladimir Makarov, Taha Merghoub, Jianda Yuan, Jesse M Zaretsky, Alexis Desrichard, Logan A Walsh, Michael A Postow, Phillip Wong, Teresa S Ho,[...]. N Engl J Med 2014
7

Cancer as an evolutionary and ecological process.
Lauren M F Merlo, John W Pepper, Brian J Reid, Carlo C Maley. Nat Rev Cancer 2006
938
7


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.