A citation-based method for searching scientific literature

Youbin Xiang, Danny E Miller, Eric J Ross, Alejandro Sánchez Alvarado, R Scott Hawley. Proc Natl Acad Sci U S A 2014
Times Cited: 18







List of co-cited articles
164 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Single-cell analysis reveals functionally distinct classes within the planarian stem cell compartment.
Josien C van Wolfswinkel, Daniel E Wagner, Peter W Reddien. Cell Stem Cell 2014
180
33

A bouquet makes ends meet.
H Scherthan. Nat Rev Mol Cell Biol 2001
301
33

Recombination, Pairing, and Synapsis of Homologs during Meiosis.
Denise Zickler, Nancy Kleckner. Cold Spring Harb Perspect Biol 2015
385
33



Amputation induces stem cell mobilization to sites of injury during planarian regeneration.
Otto C Guedelhoefer, Alejandro Sánchez Alvarado. Development 2012
57
27

Identification of genes needed for regeneration, stem cell function, and tissue homeostasis by systematic gene perturbation in planaria.
Peter W Reddien, Adam L Bermange, Kenneth J Murfitt, Joya R Jennings, Alejandro Sánchez Alvarado. Dev Cell 2005
329
27

SmedGD 2.0: The Schmidtea mediterranea genome database.
Sofia M C Robb, Kirsten Gotting, Eric Ross, Alejandro Sánchez Alvarado. Genesis 2015
90
27

Clonogenic neoblasts are pluripotent adult stem cells that underlie planarian regeneration.
Daniel E Wagner, Irving E Wang, Peter W Reddien. Science 2011
396
27

SMEDWI-2 is a PIWI-like protein that regulates planarian stem cells.
Peter W Reddien, Néstor J Oviedo, Joya R Jennings, James C Jenkin, Alejandro Sánchez Alvarado. Science 2005
426
27

Cell death and tissue remodeling in planarian regeneration.
Jason Pellettieri, Patrick Fitzgerald, Shigeki Watanabe, Joel Mancuso, Douglas R Green, Alejandro Sánchez Alvarado. Dev Biol 2010
236
22

SmedGD: the Schmidtea mediterranea genome database.
Sofia M C Robb, Eric Ross, Alejandro Sánchez Alvarado. Nucleic Acids Res 2008
226
22

Factors underlying restricted crossover localization in barley meiosis.
James D Higgins, Kim Osman, Gareth H Jones, F Chris H Franklin. Annu Rev Genet 2014
46
22

Stem cell systems and regeneration in planaria.
Jochen C Rink. Dev Genes Evol 2013
195
22

Defining the molecular profile of planarian pluripotent stem cells using a combinatorial RNAseq, RNA interference and irradiation approach.
Jordi Solana, Damian Kao, Yuliana Mihaylova, Farah Jaber-Hijazi, Sunir Malla, Ray Wilson, Aziz Aboobaker. Genome Biol 2012
115
22

Fundamentals of planarian regeneration.
Peter W Reddien, Alejandro Sánchez Alvarado. Annu Rev Cell Dev Biol 2004
480
22

Meiotic chromosomes: integrating structure and function.
D Zickler, N Kleckner. Annu Rev Genet 1999
909
22

Planarian PTEN homologs regulate stem cells and regeneration through TOR signaling.
Néstor J Oviedo, Bret J Pearson, Michael Levin, Alejandro Sánchez Alvarado. Dis Model Mech 2008
68
22

Formaldehyde-based whole-mount in situ hybridization method for planarians.
Bret J Pearson, George T Eisenhoffer, Kyle A Gurley, Jochen C Rink, Diane E Miller, Alejandro Sánchez Alvarado. Dev Dyn 2009
242
22


A Generic and Cell-Type-Specific Wound Response Precedes Regeneration in Planarians.
Omri Wurtzel, Lauren E Cote, Amber Poirier, Rahul Satija, Aviv Regev, Peter W Reddien. Dev Cell 2015
126
22

Mitochondrial pathway of apoptosis is ancestral in metazoans.
Cheryl E Bender, Patrick Fitzgerald, Stephen W G Tait, Fabien Llambi, Gavin P McStay, Douglas O Tupper, Jason Pellettieri, Alejandro Sánchez Alvarado, Guy S Salvesen, Douglas R Green. Proc Natl Acad Sci U S A 2012
73
16

PRMT5 and the role of symmetrical dimethylarginine in chromatoid bodies of planarian stem cells.
Labib Rouhana, Ana P Vieira, Rachel H Roberts-Galbraith, Phillip A Newmark. Development 2012
63
16

The molecular logic for planarian regeneration along the anterior-posterior axis.
Yoshihiko Umesono, Junichi Tasaki, Yui Nishimura, Martina Hrouda, Eri Kawaguchi, Shigenobu Yazawa, Osamu Nishimura, Kazutaka Hosoda, Takeshi Inoue, Kiyokazu Agata. Nature 2013
112
16

De novo assembly and validation of planaria transcriptome by massive parallel sequencing and shotgun proteomics.
Catherine Adamidi, Yongbo Wang, Dominic Gruen, Guido Mastrobuoni, Xintian You, Dominic Tolle, Matthias Dodt, Sebastian D Mackowiak, Andreas Gogol-Doering, Pinar Oenal,[...]. Genome Res 2011
88
16


Molecular cloning and characterization of SL3: a stem cell-specific SL RNA from the planarian Schmidtea mediterranea.
Alessandro Rossi, Eric J Ross, Antonia Jack, Alejandro Sánchez Alvarado. Gene 2014
14
21

Reactivating head regrowth in a regeneration-deficient planarian species.
S-Y Liu, C Selck, B Friedrich, R Lutz, M Vila-Farré, A Dahl, H Brandl, N Lakshmanaperumal, I Henry, J C Rink. Nature 2013
108
16

The molecular biology of meiosis in plants.
Raphaël Mercier, Christine Mézard, Eric Jenczewski, Nicolas Macaisne, Mathilde Grelon. Annu Rev Plant Biol 2015
273
16

Homologous pairing and the role of pairing centers in meiosis.
Jui-He Tsai, Bruce D McKee. J Cell Sci 2011
61
16


High resolution analysis of meiotic chromosome structure and behaviour in barley (Hordeum vulgare L.).
Dylan Phillips, Candida Nibau, Joanna Wnetrzak, Glyn Jenkins. PLoS One 2012
45
16

Meiotic recombination in mammals: localization and regulation.
Frédéric Baudat, Yukiko Imai, Bernard de Massy. Nat Rev Genet 2013
349
16

Spatiotemporal asymmetry of the meiotic program underlies the predominantly distal distribution of meiotic crossovers in barley.
James D Higgins, Ruth M Perry, Abdellah Barakate, Luke Ramsay, Robbie Waugh, Claire Halpin, Susan J Armstrong, F Chris H Franklin. Plant Cell 2012
132
16

Holocentric chromosomes: convergent evolution, meiotic adaptations, and genomic analysis.
Daniël P Melters, Leocadia V Paliulis, Ian F Korf, Simon W L Chan. Chromosome Res 2012
152
16


Meiotic recombination in C. elegans initiates by a conserved mechanism and is dispensable for homologous chromosome synapsis.
A F Dernburg, K McDonald, G Moulder, R Barstead, M Dresser, A M Villeneuve. Cell 1998
562
16

Planarian stem cells: a simple paradigm for regeneration.
A Aziz Aboobaker. Trends Cell Biol 2011
113
16

A comparative transcriptomic analysis reveals conserved features of stem cell pluripotency in planarians and mammals.
Roselyne M Labbé, Manuel Irimia, Ko W Currie, Alexander Lin, Shu Jun Zhu, David D R Brown, Eric J Ross, Veronique Voisin, Gary D Bader, Benjamin J Blencowe,[...]. Stem Cells 2012
138
16


Isolation of planarian X-ray-sensitive stem cells by fluorescence-activated cell sorting.
Tetsutaro Hayashi, Maki Asami, Sayaka Higuchi, Norito Shibata, Kiyokazu Agata. Dev Growth Differ 2006
183
16



Alternative flow cytometry strategies to analyze stem cells and cell death in planarians.
Tanuja Harshani Peiris, Marcos E García-Ojeda, Néstor J Oviedo. Regeneration (Oxf) 2016
9
33

Planarian Hh signaling regulates regeneration polarity and links Hh pathway evolution to cilia.
Jochen C Rink, Kyle A Gurley, Sarah A Elliott, Alejandro Sánchez Alvarado. Science 2009
174
16

Planarian Hedgehog/Patched establishes anterior-posterior polarity by regulating Wnt signaling.
Shigenobu Yazawa, Yoshihiko Umesono, Tetsutaro Hayashi, Hiroshi Tarui, Kiyokazu Agata. Proc Natl Acad Sci U S A 2009
123
16


Regional signals in the planarian body guide stem cell fate in the presence of genomic instability.
T Harshani Peiris, Daniel Ramirez, Paul G Barghouth, Udokanma Ofoha, Devon Davidian, Frank Weckerle, Néstor J Oviedo. Development 2016
23
16

Absence of SUN1 and SUN2 proteins in Arabidopsis thaliana leads to a delay in meiotic progression and defects in synapsis and recombination.
Javier Varas, Katja Graumann, Kim Osman, Mónica Pradillo, David E Evans, Juan L Santos, Susan J Armstrong. Plant J 2015
59
16

PlanMine--a mineable resource of planarian biology and biodiversity.
Holger Brandl, HongKee Moon, Miquel Vila-Farré, Shang-Yun Liu, Ian Henry, Jochen C Rink. Nucleic Acids Res 2016
94
16


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.