A citation-based method for searching scientific literature


List of co-cited articles
380 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Procedures for large-scale metabolic profiling of serum and plasma using gas chromatography and liquid chromatography coupled to mass spectrometry.
Warwick B Dunn, David Broadhurst, Paul Begley, Eva Zelena, Sue Francis-McIntyre, Nadine Anderson, Marie Brown, Joshau D Knowles, Antony Halsall, John N Haselden,[...]. Nat Protoc 2011
23

XCMS: processing mass spectrometry data for metabolite profiling using nonlinear peak alignment, matching, and identification.
Colin A Smith, Elizabeth J Want, Grace O'Maille, Ruben Abagyan, Gary Siuzdak. Anal Chem 2006
21

Analytical methods in untargeted metabolomics: state of the art in 2015.
Arnald Alonso, Sara Marsal, Antonio Julià. Front Bioeng Biotechnol 2015
325
16

The importance of experimental design and QC samples in large-scale and MS-driven untargeted metabolomic studies of humans.
Warwick B Dunn, Ian D Wilson, Andrew W Nicholls, David Broadhurst. Bioanalysis 2012
264
15

HMDB 3.0--The Human Metabolome Database in 2013.
David S Wishart, Timothy Jewison, An Chi Guo, Michael Wilson, Craig Knox, Yifeng Liu, Yannick Djoumbou, Rupasri Mandal, Farid Aziat, Edison Dong,[...]. Nucleic Acids Res 2013
12


Current practice of liquid chromatography-mass spectrometry in metabolomics and metabonomics.
Helen G Gika, Georgios A Theodoridis, Robert S Plumb, Ian D Wilson. J Pharm Biomed Anal 2014
214
11

Mass spectrometry-based metabolomics.
Katja Dettmer, Pavel A Aronov, Bruce D Hammock. Mass Spectrom Rev 2007
11

Innovation: Metabolomics: the apogee of the omics trilogy.
Gary J Patti, Oscar Yanes, Gary Siuzdak. Nat Rev Mol Cell Biol 2012
11



Large-scale human metabolomics studies: a strategy for data (pre-) processing and validation.
Sabina Bijlsma, Ivana Bobeldijk, Elwin R Verheij, Raymond Ramaker, Sunil Kochhar, Ian A Macdonald, Ben van Ommen, Age K Smilde. Anal Chem 2006
519
9

Global metabolic profiling procedures for urine using UPLC-MS.
Elizabeth J Want, Ian D Wilson, Helen Gika, Georgios Theodoridis, Robert S Plumb, John Shockcor, Elaine Holmes, Jeremy K Nicholson. Nat Protoc 2010
584
9

METLIN: a metabolite mass spectral database.
Colin A Smith, Grace O'Maille, Elizabeth J Want, Chuan Qin, Sunia A Trauger, Theodore R Brandon, Darlene E Custodio, Ruben Abagyan, Gary Siuzdak. Ther Drug Monit 2005
9

XCMS Online: a web-based platform to process untargeted metabolomic data.
Ralf Tautenhahn, Gary J Patti, Duane Rinehart, Gary Siuzdak. Anal Chem 2012
686
9

Normalization method for metabolomics data using optimal selection of multiple internal standards.
Marko Sysi-Aho, Mikko Katajamaa, Laxman Yetukuri, Matej Oresic. BMC Bioinformatics 2007
177
8

Highly sensitive feature detection for high resolution LC/MS.
Ralf Tautenhahn, Christoph Böttcher, Steffen Neumann. BMC Bioinformatics 2008
620
8

MZmine 2: modular framework for processing, visualizing, and analyzing mass spectrometry-based molecular profile data.
Tomás Pluskal, Sandra Castillo, Alejandro Villar-Briones, Matej Oresic. BMC Bioinformatics 2010
8


Proposed minimum reporting standards for chemical analysis Chemical Analysis Working Group (CAWG) Metabolomics Standards Initiative (MSI).
Lloyd W Sumner, Alexander Amberg, Dave Barrett, Michael H Beale, Richard Beger, Clare A Daykin, Teresa W-M Fan, Oliver Fiehn, Royston Goodacre, Julian L Griffin,[...]. Metabolomics 2007
8


Optimized preprocessing of ultra-performance liquid chromatography/mass spectrometry urinary metabolic profiles for improved information recovery.
Kirill A Veselkov, Lisa K Vingara, Perrine Masson, Steven L Robinette, Elizabeth Want, Jia V Li, Richard H Barton, Claire Boursier-Neyret, Bernard Walther, Timothy M Ebbels,[...]. Anal Chem 2011
182
7

Systems level studies of mammalian metabolomes: the roles of mass spectrometry and nuclear magnetic resonance spectroscopy.
Warwick B Dunn, David I Broadhurst, Helen J Atherton, Royston Goodacre, Julian L Griffin. Chem Soc Rev 2011
483
7



Metabolomics: beyond biomarkers and towards mechanisms.
Caroline H Johnson, Julijana Ivanisevic, Gary Siuzdak. Nat Rev Mol Cell Biol 2016
945
7

CAMERA: an integrated strategy for compound spectra extraction and annotation of liquid chromatography/mass spectrometry data sets.
Carsten Kuhl, Ralf Tautenhahn, Christoph Böttcher, Tony R Larson, Steffen Neumann. Anal Chem 2012
588
7


LC-MS alignment in theory and practice: a comprehensive algorithmic review.
Rob Smith, Dan Ventura, John T Prince. Brief Bioinform 2015
60
6

Targeted metabolomics.
Lee D Roberts, Amanda L Souza, Robert E Gerszten, Clary B Clish. Curr Protoc Mol Biol 2012
254
5

Evaluation of normalization methods to pave the way towards large-scale LC-MS-based metabolomics profiling experiments.
Bedilu Alamirie Ejigu, Dirk Valkenborg, Geert Baggerman, Manu Vanaerschot, Erwin Witters, Jean-Claude Dujardin, Tomasz Burzykowski, Maya Berg. OMICS 2013
60
6

Normalization strategies for metabonomic analysis of urine samples.
Bethanne M Warrack, Serhiy Hnatyshyn, Karl-Heinz Ott, Michael D Reily, Mark Sanders, Haiying Zhang, Dieter M Drexler. J Chromatogr B Analyt Technol Biomed Life Sci 2009
208
5

Systems biology: Metabonomics.
Jeremy K Nicholson, John C Lindon. Nature 2008
5


Optimizing the use of quality control samples for signal drift correction in large-scale urine metabolic profiling studies.
Muhammad Anas Kamleh, Timothy M D Ebbels, Konstantina Spagou, Perrine Masson, Elizabeth J Want. Anal Chem 2012
90
5

Preanalytical aspects and sample quality assessment in metabolomics studies of human blood.
Peiyuan Yin, Andreas Peter, Holger Franken, Xinjie Zhao, Sabine S Neukamm, Lars Rosenbaum, Marianna Lucio, Andreas Zell, Hans-Ulrich Häring, Guowang Xu,[...]. Clin Chem 2013
163
5

Interactive XCMS Online: simplifying advanced metabolomic data processing and subsequent statistical analyses.
Harsha Gowda, Julijana Ivanisevic, Caroline H Johnson, Michael E Kurczy, H Paul Benton, Duane Rinehart, Thomas Nguyen, Jayashree Ray, Jennifer Kuehl, Bernardo Arevalo,[...]. Anal Chem 2014
215
5


High-throughput tissue extraction protocol for NMR- and MS-based metabolomics.
Huifeng Wu, Andrew D Southam, Adam Hines, Mark R Viant. Anal Biochem 2008
383
5


Bioinformatics: the next frontier of metabolomics.
Caroline H Johnson, Julijana Ivanisevic, H Paul Benton, Gary Siuzdak. Anal Chem 2015
69
5

HILIC-MS for metabolomics: An attractive and complementary approach to RPLC-MS.
Dao-Quan Tang, Ll Zou, Xiao-Xing Yin, Choon Nam Ong. Mass Spectrom Rev 2016
109
5

MetaboAnalyst 3.0--making metabolomics more meaningful.
Jianguo Xia, Igor V Sinelnikov, Beomsoo Han, David S Wishart. Nucleic Acids Res 2015
5

MET-COFEA: a liquid chromatography/mass spectrometry data processing platform for metabolite compound feature extraction and annotation.
Wenchao Zhang, Junil Chang, Zhentian Lei, David Huhman, Lloyd W Sumner, Patrick X Zhao. Anal Chem 2014
37
10

LC-MS-based metabolomics.
Bin Zhou, Jun Feng Xiao, Leepika Tuli, Habtom W Ressom. Mol Biosyst 2012
267
5

Chemometrics in metabonomics.
Johan Trygg, Elaine Holmes, Torbjörn Lundstedt. J Proteome Res 2007
785
5

Method validation strategies involved in non-targeted metabolomics.
Shama Naz, Maria Vallejo, Antonia García, Coral Barbas. J Chromatogr A 2014
169
4

HMDB: the Human Metabolome Database.
David S Wishart, Dan Tzur, Craig Knox, Roman Eisner, An Chi Guo, Nelson Young, Dean Cheng, Kevin Jewell, David Arndt, Summit Sawhney,[...]. Nucleic Acids Res 2007
4

Plasma phospholipids identify antecedent memory impairment in older adults.
Mark Mapstone, Amrita K Cheema, Massimo S Fiandaca, Xiaogang Zhong, Timothy R Mhyre, Linda H MacArthur, William J Hall, Susan G Fisher, Derick R Peterson, James M Haley,[...]. Nat Med 2014
673
4

Profiling of thiol-containing compounds by stable isotope labeling double precursor ion scan mass spectrometry.
Ping Liu, Yun-Qing Huang, Wen-Jing Cai, Bi-Feng Yuan, Yu-Qi Feng. Anal Chem 2014
61
4


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.