A citation-based method for searching scientific literature

Andrew J Rennekamp, Randall T Peterson. Curr Opin Chem Biol 2015
Times Cited: 146







List of co-cited articles
855 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


The zebrafish reference genome sequence and its relationship to the human genome.
Kerstin Howe, Matthew D Clark, Carlos F Torroja, James Torrance, Camille Berthelot, Matthieu Muffato, John E Collins, Sean Humphray, Karen McLaren, Lucy Matthews,[...]. Nature 2013
30

Zebrafish as tools for drug discovery.
Calum A MacRae, Randall T Peterson. Nat Rev Drug Discov 2015
460
24

Stages of embryonic development of the zebrafish.
C B Kimmel, W W Ballard, S R Kimmel, B Ullmann, T F Schilling. Dev Dyn 1995
16

Zebrafish behavioral profiling links drugs to biological targets and rest/wake regulation.
Jason Rihel, David A Prober, Anthony Arvanites, Kelvin Lam, Steven Zimmerman, Sumin Jang, Stephen J Haggarty, David Kokel, Lee L Rubin, Randall T Peterson,[...]. Science 2010
442
14

In vivo drug discovery in the zebrafish.
Leonard I Zon, Randall T Peterson. Nat Rev Drug Discov 2005
872
14

Animal models of human disease: zebrafish swim into view.
Graham J Lieschke, Peter D Currie. Nat Rev Genet 2007
13

Prostaglandin E2 regulates vertebrate haematopoietic stem cell homeostasis.
Trista E North, Wolfram Goessling, Carl R Walkley, Claudia Lengerke, Kamden R Kopani, Allegra M Lord, Gerhard J Weber, Teresa V Bowman, Il-Ho Jang, Tilo Grosser,[...]. Nature 2007
778
13

Small molecule developmental screens reveal the logic and timing of vertebrate development.
R T Peterson, B A Link, J E Dowling, S L Schreiber. Proc Natl Acad Sci U S A 2000
378
13

Efficient genome editing in zebrafish using a CRISPR-Cas system.
Woong Y Hwang, Yanfang Fu, Deepak Reyon, Morgan L Maeder, Shengdar Q Tsai, Jeffry D Sander, Randall T Peterson, J-R Joanna Yeh, J Keith Joung. Nat Biotechnol 2013
13

Transparent adult zebrafish as a tool for in vivo transplantation analysis.
Richard Mark White, Anna Sessa, Christopher Burke, Teresa Bowman, Jocelyn LeBlanc, Craig Ceol, Caitlin Bourque, Michael Dovey, Wolfram Goessling, Caroline Erter Burns,[...]. Cell Stem Cell 2008
691
13

Rapid behavior-based identification of neuroactive small molecules in the zebrafish.
David Kokel, Jennifer Bryan, Christian Laggner, Rick White, Chung Yan J Cheung, Rita Mateus, David Healey, Sonia Kim, Andreas A Werdich, Stephen J Haggarty,[...]. Nat Chem Biol 2010
321
12

Hooked! Modeling human disease in zebrafish.
Cristina Santoriello, Leonard I Zon. J Clin Invest 2012
249
11

A genetic screen for mutations affecting embryogenesis in zebrafish.
W Driever, L Solnica-Krezel, A F Schier, S C Neuhauss, J Malicki, D L Stemple, D Y Stainier, F Zwartkruis, S Abdelilah, Z Rangini,[...]. Development 1996
921
10

Functional and developmental analysis of the blood-brain barrier in zebrafish.
Jae-Yeon Jeong, Hyouk-Bum Kwon, Jong-Chan Ahn, Dongmin Kang, Seung-Hae Kwon, Jeong Ae Park, Kyu-Won Kim. Brain Res Bull 2008
211
10

A CRISPR/Cas9 vector system for tissue-specific gene disruption in zebrafish.
Julien Ablain, Ellen M Durand, Song Yang, Yi Zhou, Leonard I Zon. Dev Cell 2015
208
9

First quantitative high-throughput screen in zebrafish identifies novel pathways for increasing pancreatic β-cell mass.
Guangliang Wang, Surendra K Rajpurohit, Fabien Delaspre, Steven L Walker, David T White, Alexis Ceasrine, Rejji Kuruvilla, Ruo-Jing Li, Joong S Shim, Jun O Liu,[...]. Elife 2015
59
15

High-throughput in vivo vertebrate screening.
Carlos Pardo-Martin, Tsung-Yao Chang, Bryan Kyo Koo, Cody L Gilleland, Steven C Wasserman, Mehmet Fatih Yanik. Nat Methods 2010
202
9

Chemical screening in zebrafish for novel biological and therapeutic discovery.
D S Wiley, S E Redfield, L I Zon. Methods Cell Biol 2017
52
17

Drugs that induce repolarization abnormalities cause bradycardia in zebrafish.
David J Milan, Travis A Peterson, Jeremy N Ruskin, Randall T Peterson, Calum A MacRae. Circulation 2003
297
8

Production of clones of homozygous diploid zebra fish (Brachydanio rerio).
G Streisinger, C Walker, N Dower, D Knauber, F Singer. Nature 1981
710
8

Chemical screen identifies FDA-approved drugs and target pathways that induce precocious pancreatic endocrine differentiation.
Meritxell Rovira, Wei Huang, Shamila Yusuff, Joong Sup Shim, Anthony A Ferrante, Jun O Liu, Michael J Parsons. Proc Natl Acad Sci U S A 2011
66
12

DHODH modulates transcriptional elongation in the neural crest and melanoma.
Richard Mark White, Jennifer Cech, Sutheera Ratanasirintrawoot, Charles Y Lin, Peter B Rahl, Christopher J Burke, Erin Langdon, Matthew L Tomlinson, Jack Mosher, Charles Kaufman,[...]. Nature 2011
286
8

Novel chemical suppressors of long QT syndrome identified by an in vivo functional screen.
David S Peal, Robert W Mills, Stacey N Lynch, Janet M Mosley, Evi Lim, Patrick T Ellinor, Craig T January, Randall T Peterson, David J Milan. Circulation 2011
85
9


The identification of genes with unique and essential functions in the development of the zebrafish, Danio rerio.
P Haffter, M Granato, M Brand, M C Mullins, M Hammerschmidt, D A Kane, J Odenthal, F J van Eeden, Y J Jiang, C P Heisenberg,[...]. Development 1996
8

Zebrafish behavioral profiling identifies multitarget antipsychotic-like compounds.
Giancarlo Bruni, Andrew J Rennekamp, Andrea Velenich, Matthew McCarroll, Leo Gendelev, Ethan Fertsch, Jack Taylor, Parth Lakhani, Dennis Lensen, Tama Evron,[...]. Nat Chem Biol 2016
65
12

Identification and developmental expression of the full complement of Cytochrome P450 genes in Zebrafish.
Jared V Goldstone, Andrew G McArthur, Akira Kubota, Juliano Zanette, Thiago Parente, Maria E Jönsson, David R Nelson, John J Stegeman. BMC Genomics 2010
241
8

Advances in zebrafish chemical screening technologies.
Jonathan R Mathias, Meera T Saxena, Jeff S Mumm. Future Med Chem 2012
53
13

Generation of orientation tools for automated zebrafish screening assays using desktop 3D printing.
Jonas N Wittbrodt, Urban Liebel, Jochen Gehrig. BMC Biotechnol 2014
38
18

Efficient mutagenesis by Cas9 protein-mediated oligonucleotide insertion and large-scale assessment of single-guide RNAs.
James A Gagnon, Eivind Valen, Summer B Thyme, Peng Huang, Laila Akhmetova, Andrea Pauli, Tessa G Montague, Steven Zimmerman, Constance Richter, Alexander F Schier. PLoS One 2014
444
7

Chemical suppression of a genetic mutation in a zebrafish model of aortic coarctation.
Randall T Peterson, Stanley Y Shaw, Travis A Peterson, David J Milan, Tao P Zhong, Stuart L Schreiber, Calum A MacRae, Mark C Fishman. Nat Biotechnol 2004
286
7

Whole-organism screening for gluconeogenesis identifies activators of fasting metabolism.
Philipp Gut, Bernat Baeza-Raja, Olov Andersson, Laura Hasenkamp, Joseph Hsiao, Daniel Hesselson, Katerina Akassoglou, Eric Verdin, Matthew D Hirschey, Didier Y R Stainier. Nat Chem Biol 2013
117
7

Heritable targeted gene disruption in zebrafish using designed zinc-finger nucleases.
Yannick Doyon, Jasmine M McCammon, Jeffrey C Miller, Farhoud Faraji, Catherine Ngo, George E Katibah, Rainier Amora, Toby D Hocking, Lei Zhang, Edward J Rebar,[...]. Nat Biotechnol 2008
595
7

Rapid reverse genetic screening using CRISPR in zebrafish.
Arish N Shah, Crystal F Davey, Alex C Whitebirch, Adam C Miller, Cecilia B Moens. Nat Methods 2015
175
7

Zebrafish as an emerging model for studying complex brain disorders.
Allan V Kalueff, Adam Michael Stewart, Robert Gerlai. Trends Pharmacol Sci 2014
426
7

Zebrafish screen identifies novel compound with selective toxicity against leukemia.
Suzanne Ridges, Will L Heaton, Deepa Joshi, Henry Choi, Anna Eiring, Lance Batchelor, Priya Choudhry, Elizabeth J Manos, Hossein Sofla, Ali Sanati,[...]. Blood 2012
96
6

Phenothiazines induce PP2A-mediated apoptosis in T cell acute lymphoblastic leukemia.
Alejandro Gutierrez, Li Pan, Richard W J Groen, Frederic Baleydier, Alex Kentsis, Jason Marineau, Ruta Grebliunaite, Elena Kozakewich, Casie Reed, Francoise Pflumio,[...]. J Clin Invest 2014
127
6

Epoxyeicosatrienoic acids enhance embryonic haematopoiesis and adult marrow engraftment.
Pulin Li, Jamie L Lahvic, Vera Binder, Emily K Pugach, Elizabeth B Riley, Owen J Tamplin, Dipak Panigrahy, Teresa V Bowman, Francesca G Barrett, Garrett C Heffner,[...]. Nature 2015
70
8

Reverse genetic screening reveals poor correlation between morpholino-induced and mutant phenotypes in zebrafish.
F O Kok, M Shin, C-W Ni, A Gupta, A S Grosse, A van Impel, B C Kirchmaier, J Peterson-Maduro, G Kourkoulis, I Male,[...]. Dev Cell 2015
459
6

Heritable gene targeting in zebrafish using customized TALENs.
Peng Huang, An Xiao, Mingguo Zhou, Zuoyan Zhu, Shuo Lin, Bo Zhang. Nat Biotechnol 2011
466
6

Effective targeted gene 'knockdown' in zebrafish.
A Nasevicius, S C Ekker. Nat Genet 2000
6

Drug reprofiling using zebrafish identifies novel compounds with potential pro-myelination effects.
Clare E Buckley, Anita Marguerie, Alan G Roach, Paul Goldsmith, Angeleen Fleming, Wendy K Alderton, Robin J M Franklin. Neuropharmacology 2010
55
10

Multidimensional in vivo hazard assessment using zebrafish.
Lisa Truong, David M Reif, Lindsey St Mary, Mitra C Geier, Hao D Truong, Robert L Tanguay. Toxicol Sci 2014
170
6

Identification of a new modulator of the intercalated disc in a zebrafish model of arrhythmogenic cardiomyopathy.
Angeliki Asimaki, Sudhir Kapoor, Eva Plovie, Anne Karin Arndt, Edward Adams, ZhenZhen Liu, Cynthia A James, Daniel P Judge, Hugh Calkins, Jared Churko,[...]. Sci Transl Med 2014
148
6

Visnagin protects against doxorubicin-induced cardiomyopathy through modulation of mitochondrial malate dehydrogenase.
Yan Liu, Aarti Asnani, Lin Zou, Victoria L Bentley, Min Yu, You Wang, Graham Dellaire, Kumar S Sarkar, Matthew Dai, Howard H Chen,[...]. Sci Transl Med 2014
68
8

The emerging use of zebrafish to model metabolic disease.
Asha Seth, Derek L Stemple, Inês Barroso. Dis Model Mech 2013
142
6

mpeg1 promoter transgenes direct macrophage-lineage expression in zebrafish.
Felix Ellett, Luke Pase, John W Hayman, Alex Andrianopoulos, Graham J Lieschke. Blood 2011
510
6

A zebrafish melanoma model reveals emergence of neural crest identity during melanoma initiation.
Charles K Kaufman, Christian Mosimann, Zi Peng Fan, Song Yang, Andrew J Thomas, Julien Ablain, Justin L Tan, Rachel D Fogley, Ellen van Rooijen, Elliott J Hagedorn,[...]. Science 2016
177
6

A large-scale insertional mutagenesis screen in zebrafish.
A Amsterdam, S Burgess, G Golling, W Chen, Z Sun, K Townsend, S Farrington, M Haldi, N Hopkins. Genes Dev 1999
356
6



Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.