A citation-based method for searching scientific literature

Yongsoo Kim, Kannan Umadevi Venkataraju, Kith Pradhan, Carolin Mende, Julian Taranda, Srinivas C Turaga, Ignacio Arganda-Carreras, Lydia Ng, Michael J Hawrylycz, Kathleen S Rockland, H Sebastian Seung, Pavel Osten. Cell Rep 2015
Times Cited: 165







List of co-cited articles
904 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Mapping of Brain Activity by Automated Volume Analysis of Immediate Early Genes.
Nicolas Renier, Eliza L Adams, Christoph Kirst, Zhuhao Wu, Ricardo Azevedo, Johannes Kohl, Anita E Autry, Lolahon Kadiri, Kannan Umadevi Venkataraju, Yu Zhou,[...]. Cell 2016
340
33

Serial two-photon tomography for automated ex vivo mouse brain imaging.
Timothy Ragan, Lolahon R Kadiri, Kannan Umadevi Venkataraju, Karsten Bahlmann, Jason Sutin, Julian Taranda, Ignacio Arganda-Carreras, Yongsoo Kim, H Sebastian Seung, Pavel Osten. Nat Methods 2012
342
23

A mesoscale connectome of the mouse brain.
Seung Wook Oh, Julie A Harris, Lydia Ng, Brent Winslow, Nicholas Cain, Stefan Mihalas, Quanxin Wang, Chris Lau, Leonard Kuan, Alex M Henry,[...]. Nature 2014
17

elastix: a toolbox for intensity-based medical image registration.
Stefan Klein, Marius Staring, Keelin Murphy, Max A Viergever, Josien P W Pluim. IEEE Trans Med Imaging 2010
17

Brain-wide Maps Reveal Stereotyped Cell-Type-Based Cortical Architecture and Subcortical Sexual Dimorphism.
Yongsoo Kim, Guangyu Robert Yang, Kith Pradhan, Kannan Umadevi Venkataraju, Mihail Bota, Luis Carlos García Del Molino, Greg Fitzgerald, Keerthi Ram, Miao He, Jesse Maurica Levine,[...]. Cell 2017
136
15

Social reward requires coordinated activity of nucleus accumbens oxytocin and serotonin.
Gül Dölen, Ayeh Darvishzadeh, Kee Wui Huang, Robert C Malenka. Nature 2013
601
14

Structural and molecular interrogation of intact biological systems.
Kwanghun Chung, Jenelle Wallace, Sung-Yon Kim, Sandhiya Kalyanasundaram, Aaron S Andalman, Thomas J Davidson, Julie J Mirzabekov, Kelly A Zalocusky, Joanna Mattis, Aleksandra K Denisin,[...]. Nature 2013
13

Natural neural projection dynamics underlying social behavior.
Lisa A Gunaydin, Logan Grosenick, Joel C Finkelstein, Isaac V Kauvar, Lief E Fenno, Avishek Adhikari, Stephan Lammel, Julie J Mirzabekov, Raag D Airan, Kelly A Zalocusky,[...]. Cell 2014
655
12

Neocortical excitation/inhibition balance in information processing and social dysfunction.
Ofer Yizhar, Lief E Fenno, Matthias Prigge, Franziska Schneider, Thomas J Davidson, Daniel J O'Shea, Vikaas S Sohal, Inbal Goshen, Joel Finkelstein, Jeanne T Paz,[...]. Nature 2011
12

Mapping brain circuitry with a light microscope.
Pavel Osten, Troy W Margrie. Nat Methods 2013
142
12

Ultramicroscopy: three-dimensional visualization of neuronal networks in the whole mouse brain.
Hans-Ulrich Dodt, Ulrich Leischner, Anja Schierloh, Nina Jährling, Christoph Peter Mauch, Katrin Deininger, Jan Michael Deussing, Matthias Eder, Walter Zieglgänsberger, Klaus Becker. Nat Methods 2007
724
12

A three-dimensional single-cell-resolution whole-brain atlas using CUBIC-X expansion microscopy and tissue clearing.
Tatsuya C Murakami, Tomoyuki Mano, Shu Saikawa, Shuhei A Horiguchi, Daichi Shigeta, Kousuke Baba, Hiroshi Sekiya, Yoshihiro Shimizu, Kenji F Tanaka, Hiroshi Kiyonari,[...]. Nat Neurosci 2018
129
12

iDISCO: a simple, rapid method to immunolabel large tissue samples for volume imaging.
Nicolas Renier, Zhuhao Wu, David J Simon, Jing Yang, Pablo Ariel, Marc Tessier-Lavigne. Cell 2014
728
12

Genome-wide atlas of gene expression in the adult mouse brain.
Ed S Lein, Michael J Hawrylycz, Nancy Ao, Mikael Ayres, Amy Bensinger, Amy Bernard, Andrew F Boe, Mark S Boguski, Kevin S Brockway, Emi J Byrnes,[...]. Nature 2007
11

Fiji: an open-source platform for biological-image analysis.
Johannes Schindelin, Ignacio Arganda-Carreras, Erwin Frise, Verena Kaynig, Mark Longair, Tobias Pietzsch, Stephan Preibisch, Curtis Rueden, Stephan Saalfeld, Benjamin Schmid,[...]. Nat Methods 2012
11

Whole-brain imaging with single-cell resolution using chemical cocktails and computational analysis.
Etsuo A Susaki, Kazuki Tainaka, Dimitri Perrin, Fumiaki Kishino, Takehiro Tawara, Tomonobu M Watanabe, Chihiro Yokoyama, Hirotaka Onoe, Megumi Eguchi, Shun Yamaguchi,[...]. Cell 2014
692
11

The Allen Mouse Brain Common Coordinate Framework: A 3D Reference Atlas.
Quanxin Wang, Song-Lin Ding, Yang Li, Josh Royall, David Feng, Phil Lesnar, Nile Graddis, Maitham Naeemi, Benjamin Facer, Anh Ho,[...]. Cell 2020
183
11

Functional identification of an aggression locus in the mouse hypothalamus.
Dayu Lin, Maureen P Boyle, Piotr Dollar, Hyosang Lee, E S Lein, Pietro Perona, David J Anderson. Nature 2011
506
10

aMAP is a validated pipeline for registration and segmentation of high-resolution mouse brain data.
Christian J Niedworok, Alexander P Y Brown, M Jorge Cardoso, Pavel Osten, Sebastien Ourselin, Marc Modat, Troy W Margrie. Nat Commun 2016
41
24

Evoked axonal oxytocin release in the central amygdala attenuates fear response.
H Sophie Knobloch, Alexandre Charlet, Lena C Hoffmann, Marina Eliava, Sergey Khrulev, Ali H Cetin, Pavel Osten, Martin K Schwarz, Peter H Seeburg, Ron Stoop,[...]. Neuron 2012
623
9

Advanced CLARITY for rapid and high-resolution imaging of intact tissues.
Raju Tomer, Li Ye, Brian Hsueh, Karl Deisseroth. Nat Protoc 2014
491
9


Sexually dimorphic neurons in the ventromedial hypothalamus govern mating in both sexes and aggression in males.
Cindy F Yang, Michael C Chiang, Daniel C Gray, Mahalakshmi Prabhakaran, Maricruz Alvarado, Scott A Juntti, Elizabeth K Unger, James A Wells, Nirao M Shah. Cell 2013
332
9

Clarifying Tissue Clearing.
Douglas S Richardson, Jeff W Lichtman. Cell 2015
599
9

A platform for brain-wide imaging and reconstruction of individual neurons.
Michael N Economo, Nathan G Clack, Luke D Lavis, Charles R Gerfen, Karel Svoboda, Eugene W Myers, Jayaram Chandrashekar. Elife 2016
208
9

An interactive framework for whole-brain maps at cellular resolution.
Daniel Fürth, Thomas Vaissière, Ourania Tzortzi, Yang Xuan, Antje Märtin, Iakovos Lazaridis, Giada Spigolon, Gilberto Fisone, Raju Tomer, Karl Deisseroth,[...]. Nat Neurosci 2018
87
10

High-Speed and Scalable Whole-Brain Imaging in Rodents and Primates.
Kaoru Seiriki, Atsushi Kasai, Takeshi Hashimoto, Wiebke Schulze, Misaki Niu, Shun Yamaguchi, Takanobu Nakazawa, Ken-Ichi Inoue, Shiori Uezono, Masahiko Takada,[...]. Neuron 2017
54
16

Whole-Brain Mapping of Neuronal Activity in the Learned Helplessness Model of Depression.
Yongsoo Kim, Zinaida Perova, Martine M Mirrione, Kith Pradhan, Fritz A Henn, Stephen Shea, Pavel Osten, Bo Li. Front Neural Circuits 2016
42
21

Micro-optical sectioning tomography to obtain a high-resolution atlas of the mouse brain.
Anan Li, Hui Gong, Bin Zhang, Qingdi Wang, Cheng Yan, Jingpeng Wu, Qian Liu, Shaoqun Zeng, Qingming Luo. Science 2010
258
9

A robust and high-throughput Cre reporting and characterization system for the whole mouse brain.
Linda Madisen, Theresa A Zwingman, Susan M Sunkin, Seung Wook Oh, Hatim A Zariwala, Hong Gu, Lydia L Ng, Richard D Palmiter, Michael J Hawrylycz, Allan R Jones,[...]. Nat Neurosci 2010
9

Neural Circuit Mechanisms of Social Behavior.
Patrick Chen, Weizhe Hong. Neuron 2018
143
9

Three-dimensional imaging of solvent-cleared organs using 3DISCO.
Ali Ertürk, Klaus Becker, Nina Jährling, Christoph P Mauch, Caroline D Hojer, Jackson G Egen, Farida Hellal, Frank Bradke, Morgan Sheng, Hans-Ulrich Dodt. Nat Protoc 2012
564
9

Scalable control of mounting and attack by Esr1+ neurons in the ventromedial hypothalamus.
Hyosang Lee, Dong-Wook Kim, Ryan Remedios, Todd E Anthony, Angela Chang, Linda Madisen, Hongkui Zeng, David J Anderson. Nature 2014
235
8

ScaleS: an optical clearing palette for biological imaging.
Hiroshi Hama, Hiroyuki Hioki, Kana Namiki, Tetsushi Hoshida, Hiroshi Kurokawa, Fumiyoshi Ishidate, Takeshi Kaneko, Takumi Akagi, Takashi Saito, Takaomi Saido,[...]. Nat Neurosci 2015
316
8

Functional Connectivity of Multiple Brain Regions Required for the Consolidation of Social Recognition Memory.
Toshiyuki Tanimizu, Justin W Kenney, Emiko Okano, Kazune Kadoma, Paul W Frankland, Satoshi Kida. J Neurosci 2017
98
8

Gating of social reward by oxytocin in the ventral tegmental area.
Lin W Hung, Sophie Neuner, Jai S Polepalli, Kevin T Beier, Matthew Wright, Jessica J Walsh, Eastman M Lewis, Liqun Luo, Karl Deisseroth, Gül Dölen,[...]. Science 2017
219
8

Combined Social and Spatial Coding in a Descending Projection from the Prefrontal Cortex.
Malavika Murugan, Hee Jae Jang, Michelle Park, Ellia M Miller, Julia Cox, Joshua P Taliaferro, Nathan F Parker, Varun Bhave, Hong Hur, Yupu Liang,[...]. Cell 2017
129
8

Oxytocin enables maternal behaviour by balancing cortical inhibition.
Bianca J Marlin, Mariela Mitre, James A D'amour, Moses V Chao, Robert C Froemke. Nature 2015
343
7


Allen Brain Atlas: an integrated spatio-temporal portal for exploring the central nervous system.
Susan M Sunkin, Lydia Ng, Chris Lau, Tim Dolbeare, Terri L Gilbert, Carol L Thompson, Michael Hawrylycz, Chinh Dang. Nucleic Acids Res 2013
316
7

Medial amygdalar aromatase neurons regulate aggression in both sexes.
Elizabeth K Unger, Kenneth J Burke, Cindy F Yang, Kevin J Bender, Patrick M Fuller, Nirao M Shah. Cell Rep 2015
137
7

Monosynaptic restriction of transsynaptic tracing from single, genetically targeted neurons.
Ian R Wickersham, David C Lyon, Richard J O Barnard, Takuma Mori, Stefan Finke, Karl-Klaus Conzelmann, John A T Young, Edward M Callaway. Neuron 2007
732
7

Wiring and Molecular Features of Prefrontal Ensembles Representing Distinct Experiences.
Li Ye, William E Allen, Kimberly R Thompson, Qiyuan Tian, Brian Hsueh, Charu Ramakrishnan, Ai-Chi Wang, Joshua H Jennings, Avishek Adhikari, Casey H Halpern,[...]. Cell 2016
185
7

Localization of a stable neural correlate of associative memory.
Leon G Reijmers, Brian L Perkins, Naoki Matsuo, Mark Mayford. Science 2007
441
7

Prefrontal Cortex and Social Cognition in Mouse and Man.
Lucy K Bicks, Hiroyuki Koike, Schahram Akbarian, Hirofumi Morishita. Front Psychol 2015
220
7

The BRAIN Initiative Cell Census Consortium: Lessons Learned toward Generating a Comprehensive Brain Cell Atlas.
Joseph R Ecker, Daniel H Geschwind, Arnold R Kriegstein, John Ngai, Pavel Osten, Damon Polioudakis, Aviv Regev, Nenad Sestan, Ian R Wickersham, Hongkui Zeng. Neuron 2017
128
7

Sociability and preference for social novelty in five inbred strains: an approach to assess autistic-like behavior in mice.
S S Moy, J J Nadler, A Perez, R P Barbaro, J M Johns, T R Magnuson, J Piven, J N Crawley. Genes Brain Behav 2004
897
7


Whole-brain mapping of behaviourally induced neural activation in mice.
Dulcie A Vousden, Jonathan Epp, Hiroyuki Okuno, Brian J Nieman, Matthijs van Eede, Jun Dazai, Timothy Ragan, Haruhiko Bito, Paul W Frankland, Jason P Lerch,[...]. Brain Struct Funct 2015
37
18

Enhanced Neuronal Activity in the Medial Prefrontal Cortex during Social Approach Behavior.
Eunee Lee, Issac Rhim, Jong Won Lee, Jeong-Wook Ghim, Seungjoon Lee, Eunjoon Kim, Min Whan Jung. J Neurosci 2016
55
12


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.