A citation-based method for searching scientific literature

Finlay McNab, Katrin Mayer-Barber, Alan Sher, Andreas Wack, Anne O'Garra. Nat Rev Immunol 2015
Times Cited: 857







List of co-cited articles
564 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Regulation of type I interferon responses.
Lionel B Ivashkiv, Laura T Donlin. Nat Rev Immunol 2014
17

Interferon-stimulated genes: a complex web of host defenses.
William M Schneider, Meike Dittmann Chevillotte, Charles M Rice. Annu Rev Immunol 2014
13

Impaired type I interferon activity and inflammatory responses in severe COVID-19 patients.
Jérôme Hadjadj, Nader Yatim, Laura Barnabei, Aurélien Corneau, Jeremy Boussier, Nikaïa Smith, Hélène Péré, Bruno Charbit, Vincent Bondet, Camille Chenevier-Gobeaux,[...]. Science 2020
730
13

Clinical features of patients infected with 2019 novel coronavirus in Wuhan, China.
Chaolin Huang, Yeming Wang, Xingwang Li, Lili Ren, Jianping Zhao, Yi Hu, Li Zhang, Guohui Fan, Jiuyang Xu, Xiaoying Gu,[...]. Lancet 2020
11

Autoantibodies against type I IFNs in patients with life-threatening COVID-19.
Paul Bastard, Lindsey B Rosen, Qian Zhang, Eleftherios Michailidis, Hans-Heinrich Hoffmann, Yu Zhang, Karim Dorgham, Quentin Philippot, Jérémie Rosain, Vivien Béziat,[...]. Science 2020
577
9

Clinical Characteristics of 138 Hospitalized Patients With 2019 Novel Coronavirus-Infected Pneumonia in Wuhan, China.
Dawei Wang, Bo Hu, Chang Hu, Fangfang Zhu, Xing Liu, Jing Zhang, Binbin Wang, Hui Xiang, Zhenshun Cheng, Yong Xiong,[...]. JAMA 2020
9

Imbalanced Host Response to SARS-CoV-2 Drives Development of COVID-19.
Daniel Blanco-Melo, Benjamin E Nilsson-Payant, Wen-Chun Liu, Skyler Uhl, Daisy Hoagland, Rasmus Møller, Tristan X Jordan, Kohei Oishi, Maryline Panis, David Sachs,[...]. Cell 2020
9

SARS-CoV-2 Cell Entry Depends on ACE2 and TMPRSS2 and Is Blocked by a Clinically Proven Protease Inhibitor.
Markus Hoffmann, Hannah Kleine-Weber, Simon Schroeder, Nadine Krüger, Tanja Herrler, Sandra Erichsen, Tobias S Schiergens, Georg Herrler, Nai-Huei Wu, Andreas Nitsche,[...]. Cell 2020
9

Inborn errors of type I IFN immunity in patients with life-threatening COVID-19.
Qian Zhang, Paul Bastard, Zhiyong Liu, Jérémie Le Pen, Marcela Moncada-Velez, Jie Chen, Masato Ogishi, Ira K D Sabli, Stephanie Hodeib, Cecilia Korol,[...]. Science 2020
522
8

Clinical Characteristics of Coronavirus Disease 2019 in China.
Wei-Jie Guan, Zheng-Yi Ni, Yu Hu, Wen-Hua Liang, Chun-Quan Ou, Jian-Xing He, Lei Liu, Hong Shan, Chun-Liang Lei, David S C Hui,[...]. N Engl J Med 2020
8

Pattern recognition receptors and inflammation.
Osamu Takeuchi, Shizuo Akira. Cell 2010
8

Virus interference. I. The interferon.
A ISAACS, J LINDENMANN. Proc R Soc Lond B Biol Sci 1957
7

IFN-lambdas mediate antiviral protection through a distinct class II cytokine receptor complex.
Sergei V Kotenko, Grant Gallagher, Vitaliy V Baurin, Anita Lewis-Antes, Meiling Shen, Nital K Shah, Jerome A Langer, Faruk Sheikh, Harold Dickensheets, Raymond P Donnelly. Nat Immunol 2003
7

IFN-lambda (IFN-lambda) is expressed in a tissue-dependent fashion and primarily acts on epithelial cells in vivo.
Caroline Sommereyns, Sophie Paul, Peter Staeheli, Thomas Michiels. PLoS Pathog 2008
520
7

Dysregulated Type I Interferon and Inflammatory Monocyte-Macrophage Responses Cause Lethal Pneumonia in SARS-CoV-Infected Mice.
Rudragouda Channappanavar, Anthony R Fehr, Rahul Vijay, Matthias Mack, Jincun Zhao, David K Meyerholz, Stanley Perlman. Cell Host Microbe 2016
706
7


Shared and Distinct Functions of Type I and Type III Interferons.
Helen M Lazear, John W Schoggins, Michael S Diamond. Immunity 2019
230
6

Interferons, interferon-like cytokines, and their receptors.
Sidney Pestka, Christopher D Krause, Mark R Walter. Immunol Rev 2004
6

IL-28, IL-29 and their class II cytokine receptor IL-28R.
Paul Sheppard, Wayne Kindsvogel, Wenfeng Xu, Katherine Henderson, Stacy Schlutsmeyer, Theodore E Whitmore, Rolf Kuestner, Ursula Garrigues, Carl Birks, Jenny Roraback,[...]. Nat Immunol 2003
6

Heightened Innate Immune Responses in the Respiratory Tract of COVID-19 Patients.
Zhuo Zhou, Lili Ren, Li Zhang, Jiaxin Zhong, Yan Xiao, Zhilong Jia, Li Guo, Jing Yang, Chun Wang, Shuai Jiang,[...]. Cell Host Microbe 2020
313
6

Clinical course and risk factors for mortality of adult inpatients with COVID-19 in Wuhan, China: a retrospective cohort study.
Fei Zhou, Ting Yu, Ronghui Du, Guohui Fan, Ying Liu, Zhibo Liu, Jie Xiang, Yeming Wang, Bin Song, Xiaoying Gu,[...]. Lancet 2020
6

Systems biological assessment of immunity to mild versus severe COVID-19 infection in humans.
Prabhu S Arunachalam, Florian Wimmers, Chris Ka Pun Mok, Ranawaka A P M Perera, Madeleine Scott, Thomas Hagan, Natalia Sigal, Yupeng Feng, Laurel Bristow, Owen Tak-Yin Tsang,[...]. Science 2020
256
6

Longitudinal analyses reveal immunological misfiring in severe COVID-19.
Carolina Lucas, Patrick Wong, Jon Klein, Tiago B R Castro, Julio Silva, Maria Sundaram, Mallory K Ellingson, Tianyang Mao, Ji Eun Oh, Benjamin Israelow,[...]. Nature 2020
453
6

A diverse range of gene products are effectors of the type I interferon antiviral response.
John W Schoggins, Sam J Wilson, Maryline Panis, Mary Y Murphy, Christopher T Jones, Paul Bieniasz, Charles M Rice. Nature 2011
6

Interferon-Stimulated Genes: What Do They All Do?
John W Schoggins. Annu Rev Virol 2019
119
6


STAT2 deficiency and susceptibility to viral illness in humans.
Sophie Hambleton, Stephen Goodbourn, Dan F Young, Paul Dickinson, Siti M B Mohamad, Manoj Valappil, Naomi McGovern, Andrew J Cant, Scott J Hackett, Peter Ghazal,[...]. Proc Natl Acad Sci U S A 2013
126
5

IFN-lambda determines the intestinal epithelial antiviral host defense.
Johanna Pott, Tanel Mahlakõiv, Markus Mordstein, Claudia U Duerr, Thomas Michiels, Silvia Stockinger, Peter Staeheli, Mathias W Hornef. Proc Natl Acad Sci U S A 2011
277
5

Lambda interferon renders epithelial cells of the respiratory and gastrointestinal tracts resistant to viral infections.
Markus Mordstein, Eva Neugebauer, Vanessa Ditt, Birthe Jessen, Toni Rieger, Valeria Falcone, Frederic Sorgeloos, Stephan Ehl, Daniel Mayer, Georg Kochs,[...]. J Virol 2010
269
5

Activation and evasion of type I interferon responses by SARS-CoV-2.
Xiaobo Lei, Xiaojing Dong, Ruiyi Ma, Wenjing Wang, Xia Xiao, Zhongqin Tian, Conghui Wang, Ying Wang, Li Li, Lili Ren,[...]. Nat Commun 2020
210
5

Immunophenotyping of COVID-19 and influenza highlights the role of type I interferons in development of severe COVID-19.
Jeong Seok Lee, Seongwan Park, Hye Won Jeong, Jin Young Ahn, Seong Jin Choi, Hoyoung Lee, Baekgyu Choi, Su Kyung Nam, Moa Sa, Ji-Soo Kwon,[...]. Sci Immunol 2020
210
5

Single-cell landscape of bronchoalveolar immune cells in patients with COVID-19.
Mingfeng Liao, Yang Liu, Jing Yuan, Yanling Wen, Gang Xu, Juanjuan Zhao, Lin Cheng, Jinxiu Li, Xin Wang, Fuxiang Wang,[...]. Nat Med 2020
690
5

The trinity of COVID-19: immunity, inflammation and intervention.
Matthew Zirui Tay, Chek Meng Poh, Laurent Rénia, Paul A MacAry, Lisa F P Ng. Nat Rev Immunol 2020
5

A pneumonia outbreak associated with a new coronavirus of probable bat origin.
Peng Zhou, Xing-Lou Yang, Xian-Guang Wang, Ben Hu, Lei Zhang, Wei Zhang, Hao-Rui Si, Yan Zhu, Bei Li, Chao-Lin Huang,[...]. Nature 2020
5


Guarding the frontiers: the biology of type III interferons.
Andreas Wack, Ewa Terczyńska-Dyla, Rune Hartmann. Nat Immunol 2015
178
4

clusterProfiler: an R package for comparing biological themes among gene clusters.
Guangchuang Yu, Li-Gen Wang, Yanyan Han, Qing-Yu He. OMICS 2012
4

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data.
Mark D Robinson, Davis J McCarthy, Gordon K Smyth. Bioinformatics 2010
4


Aicardi-Goutières syndrome and the type I interferonopathies.
Yanick J Crow, Nicolas Manel. Nat Rev Immunol 2015
424
4

Into the eye of the cytokine storm.
Jennifer R Tisoncik, Marcus J Korth, Cameron P Simmons, Jeremy Farrar, Thomas R Martin, Michael G Katze. Microbiol Mol Biol Rev 2012
830
4

IFN-λ prevents influenza virus spread from the upper airways to the lungs and limits virus transmission.
Jonas Klinkhammer, Daniel Schnepf, Liang Ye, Marilena Schwaderlapp, Hans Henrik Gad, Rune Hartmann, Dominique Garcin, Tanel Mahlakõiv, Peter Staeheli. Elife 2018
104
4

Type I interferon inhibits interleukin-1 production and inflammasome activation.
Greta Guarda, Marion Braun, Francesco Staehli, Aubry Tardivel, Chantal Mattmann, Irmgard Förster, Matthias Farlik, Thomas Decker, Renaud A Du Pasquier, Pedro Romero,[...]. Immunity 2011
591
4

A variant upstream of IFNL3 (IL28B) creating a new interferon gene IFNL4 is associated with impaired clearance of hepatitis C virus.
Ludmila Prokunina-Olsson, Brian Muchmore, Wei Tang, Ruth M Pfeiffer, Heiyoung Park, Harold Dickensheets, Dianna Hergott, Patricia Porter-Gill, Adam Mumy, Indu Kohaar,[...]. Nat Genet 2013
627
4

Human IFNAR2 deficiency: Lessons for antiviral immunity.
Christopher J A Duncan, Siti M B Mohamad, Dan F Young, Andrew J Skelton, T Ronan Leahy, Diane C Munday, Karina M Butler, Sofia Morfopoulou, Julianne R Brown, Mike Hubank,[...]. Sci Transl Med 2015
98
4

Dexamethasone in Hospitalized Patients with Covid-19.
Peter Horby, Wei Shen Lim, Jonathan R Emberson, Marion Mafham, Jennifer L Bell, Louise Linsell, Natalie Staplin, Christopher Brightling, Andrew Ustianowski, Einas Elmahi,[...]. N Engl J Med 2021
4

Lambda interferon is the predominant interferon induced by influenza A virus infection in vivo.
Nancy A Jewell, Troy Cline, Sara E Mertz, Sergey V Smirnov, Emilio Flaño, Christian Schindler, Jessica L Grieves, Russell K Durbin, Sergei V Kotenko, Joan E Durbin. J Virol 2010
177
4

Type 1 interferons as a potential treatment against COVID-19.
Erwan Sallard, François-Xavier Lescure, Yazdan Yazdanpanah, France Mentre, Nathan Peiffer-Smadja. Antiviral Res 2020
233
4


IFN-I response timing relative to virus replication determines MERS coronavirus infection outcomes.
Rudragouda Channappanavar, Anthony R Fehr, Jian Zheng, Christine Wohlford-Lenane, Juan E Abrahante, Matthias Mack, Ramakrishna Sompallae, Paul B McCray, David K Meyerholz, Stanley Perlman. J Clin Invest 2019
236
4


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.