Gayan Mirihana Arachchilage, Arosha C Dassanayake, Soumitra Basu. Chem Biol 2015
Times Cited: 75
Times Cited: 75
Times Cited
Times Co-cited
Similarity
The RNA Stem-Loop to G-Quadruplex Equilibrium Controls Mature MicroRNA Production inside the Cell.
Satyaprakash Pandey, Prachi Agarwala, Gopal G Jayaraj, Raimundo Gargallo, Souvik Maiti. Biochemistry 2015
Satyaprakash Pandey, Prachi Agarwala, Gopal G Jayaraj, Raimundo Gargallo, Souvik Maiti. Biochemistry 2015
77
Visualization and selective chemical targeting of RNA G-quadruplex structures in the cytoplasm of human cells.
Giulia Biffi, Marco Di Antonio, David Tannahill, Shankar Balasubramanian. Nat Chem 2014
Giulia Biffi, Marco Di Antonio, David Tannahill, Shankar Balasubramanian. Nat Chem 2014
37
An RNA hairpin to G-quadruplex conformational transition.
Anthony Bugaut, Pierre Murat, Shankar Balasubramanian. J Am Chem Soc 2012
Anthony Bugaut, Pierre Murat, Shankar Balasubramanian. J Am Chem Soc 2012
45
An RNA G-quadruplex in the 5' UTR of the NRAS proto-oncogene modulates translation.
Sunita Kumari, Anthony Bugaut, Julian L Huppert, Shankar Balasubramanian. Nat Chem Biol 2007
Sunita Kumari, Anthony Bugaut, Julian L Huppert, Shankar Balasubramanian. Nat Chem Biol 2007
33
Structural Analysis using SHALiPE to Reveal RNA G-Quadruplex Formation in Human Precursor MicroRNA.
Chun Kit Kwok, Aleksandr B Sahakyan, Shankar Balasubramanian. Angew Chem Int Ed Engl 2016
Chun Kit Kwok, Aleksandr B Sahakyan, Shankar Balasubramanian. Angew Chem Int Ed Engl 2016
42
Prevalence of quadruplexes in the human genome.
Julian L Huppert, Shankar Balasubramanian. Nucleic Acids Res 2005
Julian L Huppert, Shankar Balasubramanian. Nucleic Acids Res 2005
30
rG4-seq reveals widespread formation of G-quadruplex structures in the human transcriptome.
Chun Kit Kwok, Giovanni Marsico, Aleksandr B Sahakyan, Vicki S Chambers, Shankar Balasubramanian. Nat Methods 2016
Chun Kit Kwok, Giovanni Marsico, Aleksandr B Sahakyan, Vicki S Chambers, Shankar Balasubramanian. Nat Methods 2016
30
RNA G-quadruplexes are globally unfolded in eukaryotic cells and depleted in bacteria.
Junjie U Guo, David P Bartel. Science 2016
Junjie U Guo, David P Bartel. Science 2016
29
G-quadruplexes in RNA biology.
Stefania Millevoi, Hervé Moine, Stéphan Vagner. Wiley Interdiscip Rev RNA 2012
Stefania Millevoi, Hervé Moine, Stéphan Vagner. Wiley Interdiscip Rev RNA 2012
28
Quantitative visualization of DNA G-quadruplex structures in human cells.
Giulia Biffi, David Tannahill, John McCafferty, Shankar Balasubramanian. Nat Chem 2013
Giulia Biffi, David Tannahill, John McCafferty, Shankar Balasubramanian. Nat Chem 2013
26
5'-UTR RNA G-quadruplexes: translation regulation and targeting.
Anthony Bugaut, Shankar Balasubramanian. Nucleic Acids Res 2012
Anthony Bugaut, Shankar Balasubramanian. Nucleic Acids Res 2012
26
Quadruplex DNA: sequence, topology and structure.
Sarah Burge, Gary N Parkinson, Pascale Hazel, Alan K Todd, Stephen Neidle. Nucleic Acids Res 2006
Sarah Burge, Gary N Parkinson, Pascale Hazel, Alan K Todd, Stephen Neidle. Nucleic Acids Res 2006
26
An RNA G-quadruplex is essential for cap-independent translation initiation in human VEGF IRES.
Mark J Morris, Yoichi Negishi, Cathy Pazsint, Joseph D Schonhoft, Soumitra Basu. J Am Chem Soc 2010
Mark J Morris, Yoichi Negishi, Cathy Pazsint, Joseph D Schonhoft, Soumitra Basu. J Am Chem Soc 2010
26
RNA G-Quadruplexes in Biology: Principles and Molecular Mechanisms.
Marta M Fay, Shawn M Lyons, Pavel Ivanov. J Mol Biol 2017
Marta M Fay, Shawn M Lyons, Pavel Ivanov. J Mol Biol 2017
26
High-throughput sequencing of DNA G-quadruplex structures in the human genome.
Vicki S Chambers, Giovanni Marsico, Jonathan M Boutell, Marco Di Antonio, Geoffrey P Smith, Shankar Balasubramanian. Nat Biotechnol 2015
Vicki S Chambers, Giovanni Marsico, Jonathan M Boutell, Marco Di Antonio, Geoffrey P Smith, Shankar Balasubramanian. Nat Biotechnol 2015
25
Potential G-quadruplexes in the human long non-coding transcriptome.
Gopal Gunanathan Jayaraj, Satyaprakash Pandey, Vinod Scaria, Souvik Maiti. RNA Biol 2012
Gopal Gunanathan Jayaraj, Satyaprakash Pandey, Vinod Scaria, Souvik Maiti. RNA Biol 2012
47
G-quadruplex RNA structure as a signal for neurite mRNA targeting.
Murugan Subramanian, Florence Rage, Ricardos Tabet, Eric Flatter, Jean-Louis Mandel, Hervé Moine. EMBO Rep 2011
Murugan Subramanian, Florence Rage, Ricardos Tabet, Eric Flatter, Jean-Louis Mandel, Hervé Moine. EMBO Rep 2011
24
G-quadruplexes and their regulatory roles in biology.
Daniela Rhodes, Hans J Lipps. Nucleic Acids Res 2015
Daniela Rhodes, Hans J Lipps. Nucleic Acids Res 2015
22
G-quadruplexes: the beginning and end of UTRs.
Julian Leon Huppert, Anthony Bugaut, Sunita Kumari, Shankar Balasubramanian. Nucleic Acids Res 2008
Julian Leon Huppert, Anthony Bugaut, Sunita Kumari, Shankar Balasubramanian. Nucleic Acids Res 2008
21
Effect of loops and G-quartets on the stability of RNA G-quadruplexes.
Satyaprakash Pandey, Prachi Agarwala, Souvik Maiti. J Phys Chem B 2013
Satyaprakash Pandey, Prachi Agarwala, Souvik Maiti. J Phys Chem B 2013
27
The tale of RNA G-quadruplex.
Prachi Agarwala, Satyaprakash Pandey, Souvik Maiti. Org Biomol Chem 2015
Prachi Agarwala, Satyaprakash Pandey, Souvik Maiti. Org Biomol Chem 2015
21
G-quadruplexes: Emerging roles in neurodegenerative diseases and the non-coding transcriptome.
Roberto Simone, Pietro Fratta, Stephen Neidle, Gary N Parkinson, Adrian M Isaacs. FEBS Lett 2015
Roberto Simone, Pietro Fratta, Stephen Neidle, Gary N Parkinson, Adrian M Isaacs. FEBS Lett 2015
21
Metal Cations in G-Quadruplex Folding and Stability.
Debmalya Bhattacharyya, Gayan Mirihana Arachchilage, Soumitra Basu. Front Chem 2016
Debmalya Bhattacharyya, Gayan Mirihana Arachchilage, Soumitra Basu. Front Chem 2016
21
G-Quadruplexes influence pri-microRNA processing.
Samuel G Rouleau, Jean-Michel Garant, François Bolduc, Martin Bisaillon, Jean-Pierre Perreault. RNA Biol 2018
Samuel G Rouleau, Jean-Michel Garant, François Bolduc, Martin Bisaillon, Jean-Pierre Perreault. RNA Biol 2018
42
20
The G-quadruplex augments translation in the 5' untranslated region of transforming growth factor β2.
Prachi Agarwala, Satyaprakash Pandey, Koyeli Mapa, Souvik Maiti. Biochemistry 2013
Prachi Agarwala, Satyaprakash Pandey, Koyeli Mapa, Souvik Maiti. Biochemistry 2013
28
Transcriptome-wide identification of transient RNA G-quadruplexes in human cells.
Sunny Y Yang, Pauline Lejault, Sandy Chevrier, Romain Boidot, A Gordon Robertson, Judy M Y Wong, David Monchaud. Nat Commun 2018
Sunny Y Yang, Pauline Lejault, Sandy Chevrier, Romain Boidot, A Gordon Robertson, Judy M Y Wong, David Monchaud. Nat Commun 2018
20
C9orf72 nucleotide repeat structures initiate molecular cascades of disease.
Aaron R Haeusler, Christopher J Donnelly, Goran Periz, Eric A J Simko, Patrick G Shaw, Min-Sik Kim, Nicholas J Maragakis, Juan C Troncoso, Akhilesh Pandey, Rita Sattler,[...]. Nature 2014
Aaron R Haeusler, Christopher J Donnelly, Goran Periz, Eric A J Simko, Patrick G Shaw, Min-Sik Kim, Nicholas J Maragakis, Juan C Troncoso, Akhilesh Pandey, Rita Sattler,[...]. Nature 2014
18
The G-quartet containing FMRP binding site in FMR1 mRNA is a potent exonic splicing enhancer.
Marie-Cécile Didiot, Zhaoxia Tian, Céline Schaeffer, Murugan Subramanian, Jean-Louis Mandel, Hervé Moine. Nucleic Acids Res 2008
Marie-Cécile Didiot, Zhaoxia Tian, Céline Schaeffer, Murugan Subramanian, Jean-Louis Mandel, Hervé Moine. Nucleic Acids Res 2008
18
G-quadruplexes in promoters throughout the human genome.
Julian L Huppert, Shankar Balasubramanian. Nucleic Acids Res 2007
Julian L Huppert, Shankar Balasubramanian. Nucleic Acids Res 2007
18
G-quadruplex structures in TP53 intron 3: role in alternative splicing and in production of p53 mRNA isoforms.
Virginie Marcel, Phong L T Tran, Charlotte Sagne, Ghyslaine Martel-Planche, Laurence Vaslin, Marie-Paule Teulade-Fichou, Janet Hall, Jean-Louis Mergny, Pierre Hainaut, Eric Van Dyck. Carcinogenesis 2011
Virginie Marcel, Phong L T Tran, Charlotte Sagne, Ghyslaine Martel-Planche, Laurence Vaslin, Marie-Paule Teulade-Fichou, Janet Hall, Jean-Louis Mergny, Pierre Hainaut, Eric Van Dyck. Carcinogenesis 2011
18
RNA G-quadruplexes cause eIF4A-dependent oncogene translation in cancer.
Andrew L Wolfe, Kamini Singh, Yi Zhong, Philipp Drewe, Vinagolu K Rajasekhar, Viraj R Sanghvi, Konstantinos J Mavrakis, Man Jiang, Justine E Roderick, Joni Van der Meulen,[...]. Nature 2014
Andrew L Wolfe, Kamini Singh, Yi Zhong, Philipp Drewe, Vinagolu K Rajasekhar, Viraj R Sanghvi, Konstantinos J Mavrakis, Man Jiang, Justine E Roderick, Joni Van der Meulen,[...]. Nature 2014
18
QGRS Mapper: a web-based server for predicting G-quadruplexes in nucleotide sequences.
Oleg Kikin, Lawrence D'Antonio, Paramjeet S Bagga. Nucleic Acids Res 2006
Oleg Kikin, Lawrence D'Antonio, Paramjeet S Bagga. Nucleic Acids Res 2006
18
RNA G-quadruplexes: emerging mechanisms in disease.
Anne Cammas, Stefania Millevoi. Nucleic Acids Res 2017
Anne Cammas, Stefania Millevoi. Nucleic Acids Res 2017
18
G-quadruplex structures mark human regulatory chromatin.
Robert Hänsel-Hertsch, Dario Beraldi, Stefanie V Lensing, Giovanni Marsico, Katherine Zyner, Aled Parry, Marco Di Antonio, Jeremy Pike, Hiroshi Kimura, Masashi Narita,[...]. Nat Genet 2016
Robert Hänsel-Hertsch, Dario Beraldi, Stefanie V Lensing, Giovanni Marsico, Katherine Zyner, Aled Parry, Marco Di Antonio, Jeremy Pike, Hiroshi Kimura, Masashi Narita,[...]. Nat Genet 2016
18
3' UTR G-quadruplexes regulate miRNA binding.
Samuel Rouleau, Jean-Pierre Sehi Glouzon, Andrea Brumwell, Martin Bisaillon, Jean-Pierre Perreault. RNA 2017
Samuel Rouleau, Jean-Pierre Sehi Glouzon, Andrea Brumwell, Martin Bisaillon, Jean-Pierre Perreault. RNA 2017
24
Formation of parallel four-stranded complexes by guanine-rich motifs in DNA and its implications for meiosis.
D Sen, W Gilbert. Nature 1988
D Sen, W Gilbert. Nature 1988
17
An unusually stable G-quadruplex within the 5'-UTR of the MT3 matrix metalloproteinase mRNA represses translation in eukaryotic cells.
Mark J Morris, Soumitra Basu. Biochemistry 2009
Mark J Morris, Soumitra Basu. Biochemistry 2009
17
Stimulation of ribosomal frameshifting by RNA G-quadruplex structures.
Chien-Hung Yu, Marie-Paule Teulade-Fichou, René C L Olsthoorn. Nucleic Acids Res 2014
Chien-Hung Yu, Marie-Paule Teulade-Fichou, René C L Olsthoorn. Nucleic Acids Res 2014
28
A comparison of DNA and RNA quadruplex structures and stabilities.
Astrid Joachimi, Armin Benz, Jörg S Hartig. Bioorg Med Chem 2009
Astrid Joachimi, Armin Benz, Jörg S Hartig. Bioorg Med Chem 2009
17
G-quadruplexes regulate Epstein-Barr virus-encoded nuclear antigen 1 mRNA translation.
Pierre Murat, Jie Zhong, Lea Lekieffre, Nathan P Cowieson, Jennifer L Clancy, Thomas Preiss, Shankar Balasubramanian, Rajiv Khanna, Judy Tellam. Nat Chem Biol 2014
Pierre Murat, Jie Zhong, Lea Lekieffre, Nathan P Cowieson, Jennifer L Clancy, Thomas Preiss, Shankar Balasubramanian, Rajiv Khanna, Judy Tellam. Nat Chem Biol 2014
17
Exploring mRNA 3'-UTR G-quadruplexes: evidence of roles in both alternative polyadenylation and mRNA shortening.
Jean-Denis Beaudoin, Jean-Pierre Perreault. Nucleic Acids Res 2013
Jean-Denis Beaudoin, Jean-Pierre Perreault. Nucleic Acids Res 2013
17
New scoring system to identify RNA G-quadruplex folding.
Jean-Denis Beaudoin, Rachel Jodoin, Jean-Pierre Perreault. Nucleic Acids Res 2014
Jean-Denis Beaudoin, Rachel Jodoin, Jean-Pierre Perreault. Nucleic Acids Res 2014
19
Co-transcriptional formation of DNA:RNA hybrid G-quadruplex and potential function as constitutional cis element for transcription control.
Ke-wei Zheng, Shan Xiao, Jia-quan Liu, Jia-yu Zhang, Yu-hua Hao, Zheng Tan. Nucleic Acids Res 2013
Ke-wei Zheng, Shan Xiao, Jia-quan Liu, Jia-yu Zhang, Yu-hua Hao, Zheng Tan. Nucleic Acids Res 2013
16
G-quadruplex structures contribute to the neuroprotective effects of angiogenin-induced tRNA fragments.
Pavel Ivanov, Elizabeth O'Day, Mohamed M Emara, Gerhard Wagner, Judy Lieberman, Paul Anderson. Proc Natl Acad Sci U S A 2014
Pavel Ivanov, Elizabeth O'Day, Mohamed M Emara, Gerhard Wagner, Judy Lieberman, Paul Anderson. Proc Natl Acad Sci U S A 2014
16
G quadruplex RNA structures in PSD-95 mRNA: potential regulators of miR-125a seed binding site accessibility.
Snezana Stefanovic, Gary J Bassell, Mihaela Rita Mihailescu. RNA 2015
Snezana Stefanovic, Gary J Bassell, Mihaela Rita Mihailescu. RNA 2015
27
Suppression of gene expression by G-quadruplexes in open reading frames depends on G-quadruplex stability.
Tamaki Endoh, Yu Kawasaki, Naoki Sugimoto. Angew Chem Int Ed Engl 2013
Tamaki Endoh, Yu Kawasaki, Naoki Sugimoto. Angew Chem Int Ed Engl 2013
16
Direct evidence for a G-quadruplex in a promoter region and its targeting with a small molecule to repress c-MYC transcription.
Adam Siddiqui-Jain, Cory L Grand, David J Bearss, Laurence H Hurley. Proc Natl Acad Sci U S A 2002
Adam Siddiqui-Jain, Cory L Grand, David J Bearss, Laurence H Hurley. Proc Natl Acad Sci U S A 2002
16
The BCL-2 5' untranslated region contains an RNA G-quadruplex-forming motif that modulates protein expression.
Ramla Shahid, Anthony Bugaut, Shankar Balasubramanian. Biochemistry 2010
Ramla Shahid, Anthony Bugaut, Shankar Balasubramanian. Biochemistry 2010
16
An RNA G-quadruplex in the 3' UTR of the proto-oncogene PIM1 represses translation.
Amit Arora, Beatrix Suess. RNA Biol 2011
Amit Arora, Beatrix Suess. RNA Biol 2011
21
Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.