A citation-based method for searching scientific literature

Haoxing Xu, Dejian Ren. Annu Rev Physiol 2015
Times Cited: 511







List of co-cited articles
945 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Lipid storage disorders block lysosomal trafficking by inhibiting a TRP channel and lysosomal calcium release.
Dongbiao Shen, Xiang Wang, Xinran Li, Xiaoli Zhang, Zepeng Yao, Shannon Dibble, Xian-ping Dong, Ting Yu, Andrew P Lieberman, Hollis D Showalter,[...]. Nat Commun 2012
311
19

A TRP channel in the lysosome regulates large particle phagocytosis via focal exocytosis.
Mohammad Samie, Xiang Wang, Xiaoli Zhang, Andrew Goschka, Xinran Li, Xiping Cheng, Evan Gregg, Marlene Azar, Yue Zhuo, Abigail G Garrity,[...]. Dev Cell 2013
186
18

TPC proteins are phosphoinositide- activated sodium-selective ion channels in endosomes and lysosomes.
Xiang Wang, Xiaoli Zhang, Xian-Ping Dong, Mohammad Samie, Xinran Li, Xiping Cheng, Andrew Goschka, Dongbiao Shen, Yandong Zhou, Janice Harlow,[...]. Cell 2012
360
17

mTOR regulates lysosomal ATP-sensitive two-pore Na(+) channels to adapt to metabolic state.
Chunlei Cang, Yandong Zhou, Betsy Navarro, Young-Jun Seo, Kimberly Aranda, Lucy Shi, Shyuefang Battaglia-Hsu, Itzhak Nissim, David E Clapham, Dejian Ren. Cell 2013
261
15

Lysosomes as dynamic regulators of cell and organismal homeostasis.
Andrea Ballabio, Juan S Bonifacino. Nat Rev Mol Cell Biol 2020
313
14

NAADP mobilizes calcium from acidic organelles through two-pore channels.
Peter J Calcraft, Margarida Ruas, Zui Pan, Xiaotong Cheng, Abdelilah Arredouani, Xuemei Hao, Jisen Tang, Katja Rietdorf, Lydia Teboul, Kai-Ting Chuang,[...]. Nature 2009
562
13

PI(3,5)P(2) controls membrane trafficking by direct activation of mucolipin Ca(2+) release channels in the endolysosome.
Xian-ping Dong, Dongbiao Shen, Xiang Wang, Taylor Dawson, Xinran Li, Qi Zhang, Xiping Cheng, Yanling Zhang, Lois S Weisman, Markus Delling,[...]. Nat Commun 2010
397
13

Molecular mechanisms of endolysosomal Ca2+ signalling in health and disease.
Anthony J Morgan, Frances M Platt, Emyr Lloyd-Evans, Antony Galione. Biochem J 2011
261
13

A gene network regulating lysosomal biogenesis and function.
Marco Sardiello, Michela Palmieri, Alberto di Ronza, Diego Luis Medina, Marta Valenza, Vincenzo Alessandro Gennarino, Chiara Di Malta, Francesca Donaudy, Valerio Embrione, Roman S Polishchuk,[...]. Science 2009
12

TFEB links autophagy to lysosomal biogenesis.
Carmine Settembre, Chiara Di Malta, Vinicia Assunta Polito, Moises Garcia Arencibia, Francesco Vetrini, Serkan Erdin, Serpil Uckac Erdin, Tuong Huynh, Diego Medina, Pasqualina Colella,[...]. Science 2011
12

Lysosomal calcium signalling regulates autophagy through calcineurin and ​TFEB.
Diego L Medina, Simone Di Paola, Ivana Peluso, Andrea Armani, Diego De Stefani, Rossella Venditti, Sandro Montefusco, Anna Scotto-Rosato, Carolina Prezioso, Alison Forrester,[...]. Nat Cell Biol 2015
714
12

A molecular mechanism to regulate lysosome motility for lysosome positioning and tubulation.
Xinran Li, Nicholas Rydzewski, Ahmad Hider, Xiaoli Zhang, Junsheng Yang, Wuyang Wang, Qiong Gao, Xiping Cheng, Haoxing Xu. Nat Cell Biol 2016
214
12

Agonist-mediated switching of ion selectivity in TPC2 differentially promotes lysosomal function.
Susanne Gerndt, Cheng-Chang Chen, Yu-Kai Chao, Yu Yuan, Sandra Burgstaller, Anna Scotto Rosato, Einar Krogsaeter, Nicole Urban, Katharina Jacob, Ong Nam Phuong Nguyen,[...]. Elife 2020
71
15

Transcriptional activation of lysosomal exocytosis promotes cellular clearance.
Diego L Medina, Alessandro Fraldi, Valentina Bouche, Fabio Annunziata, Gelsomina Mansueto, Carmine Spampanato, Claudia Puri, Antonella Pignata, Jose A Martina, Marco Sardiello,[...]. Dev Cell 2011
433
11

High susceptibility to fatty liver disease in two-pore channel 2-deficient mice.
Christian Grimm, Lesca M Holdt, Cheng-Chang Chen, Sami Hassan, Christoph Müller, Simone Jörs, Hartmut Cuny, Sandra Kissing, Bernd Schröder, Elisabeth Butz,[...]. Nat Commun 2014
140
11

The type IV mucolipidosis-associated protein TRPML1 is an endolysosomal iron release channel.
Xian-Ping Dong, Xiping Cheng, Eric Mills, Markus Delling, Fudi Wang, Tino Kurz, Haoxing Xu. Nature 2008
367
11

Lysosomal acidification mechanisms.
Joseph A Mindell. Annu Rev Physiol 2012
614
11

Signals from the lysosome: a control centre for cellular clearance and energy metabolism.
Carmine Settembre, Alessandro Fraldi, Diego L Medina, Andrea Ballabio. Nat Rev Mol Cell Biol 2013
942
11

The role of TRPMLs in endolysosomal trafficking and function.
Kartik Venkatachalam, Ching-On Wong, Michael X Zhu. Cell Calcium 2015
120
10

MCOLN1 is a ROS sensor in lysosomes that regulates autophagy.
Xiaoli Zhang, Xiping Cheng, Lu Yu, Junsheng Yang, Raul Calvo, Samarjit Patnaik, Xin Hu, Qiong Gao, Meimei Yang, Maria Lawas,[...]. Nat Commun 2016
263
10

Expression of Ca²⁺-permeable two-pore channels rescues NAADP signalling in TPC-deficient cells.
Margarida Ruas, Lianne C Davis, Cheng-Chang Chen, Anthony J Morgan, Kai-Ting Chuang, Timothy F Walseth, Christian Grimm, Clive Garnham, Trevor Powell, Nick Platt,[...]. EMBO J 2015
112
10

Ebola virus. Two-pore channels control Ebola virus host cell entry and are drug targets for disease treatment.
Yasuteru Sakurai, Andrey A Kolokoltsov, Cheng-Chang Chen, Michael W Tidwell, William E Bauta, Norbert Klugbauer, Christian Grimm, Christian Wahl-Schott, Martin Biel, Robert A Davey. Science 2015
334
10

Essential requirement for two-pore channel 1 in NAADP-mediated calcium signaling.
Eugen Brailoiu, Dev Churamani, Xinjiang Cai, Michael G Schrlau, G Cristina Brailoiu, Xin Gao, Robert Hooper, Michael J Boulware, Nae J Dun, Jonathan S Marchant,[...]. J Cell Biol 2009
326
10


The position of lysosomes within the cell determines their luminal pH.
Danielle E Johnson, Philip Ostrowski, Valentin Jaumouillé, Sergio Grinstein. J Cell Biol 2016
282
10

Mucolipins: Intracellular TRPML1-3 channels.
Xiping Cheng, Dongbiao Shen, Mohammad Samie, Haoxing Xu. FEBS Lett 2010
170
10

Lysosomes: fusion and function.
J Paul Luzio, Paul R Pryor, Nicholas A Bright. Nat Rev Mol Cell Biol 2007
10

Lysosomal Ion Channels as Decoders of Cellular Signals.
Ping Li, Mingxue Gu, Haoxing Xu. Trends Biochem Sci 2019
57
15

Up-regulation of lysosomal TRPML1 channels is essential for lysosomal adaptation to nutrient starvation.
Wuyang Wang, Qiong Gao, Meimei Yang, Xiaoli Zhang, Lu Yu, Maria Lawas, Xinran Li, Marthe Bryant-Genevier, Noel T Southall, Juan Marugan,[...]. Proc Natl Acad Sci U S A 2015
139
9

The voltage-gated sodium channel TPC1 confers endolysosomal excitability.
Chunlei Cang, Biruk Bekele, Dejian Ren. Nat Chem Biol 2014
112
9

The two-pore channel TPCN2 mediates NAADP-dependent Ca(2+)-release from lysosomal stores.
Xiangang Zong, Michael Schieder, Hartmut Cuny, Stefanie Fenske, Christian Gruner, Katrin Rötzer, Oliver Griesbeck, Hartmann Harz, Martin Biel, Christian Wahl-Schott. Pflugers Arch 2009
220
9

Convergent regulation of the lysosomal two-pore channel-2 by Mg²⁺, NAADP, PI(3,5)P₂ and multiple protein kinases.
Archana Jha, Malini Ahuja, Sandip Patel, Eugen Brailoiu, Shmuel Muallem. EMBO J 2014
139
9

A small molecule restores function to TRPML1 mutant isoforms responsible for mucolipidosis type IV.
Cheng-Chang Chen, Marco Keller, Martin Hess, Raphael Schiffmann, Nicole Urban, Annette Wolfgardt, Michael Schaefer, Franz Bracher, Martin Biel, Christian Wahl-Schott,[...]. Nat Commun 2014
97
9

Lysosomes as a therapeutic target.
Srinivasa Reddy Bonam, Fengjuan Wang, Sylviane Muller. Nat Rev Drug Discov 2019
154
9

The Lysosome as a Regulatory Hub.
Rushika M Perera, Roberto Zoncu. Annu Rev Cell Dev Biol 2016
262
9

pH-dependent regulation of lysosomal calcium in macrophages.
Kenneth A Christensen, Jesse T Myers, Joel A Swanson. J Cell Sci 2002
351
9

A lysosome-to-nucleus signalling mechanism senses and regulates the lysosome via mTOR and TFEB.
Carmine Settembre, Roberto Zoncu, Diego L Medina, Francesco Vetrini, Serkan Erdin, SerpilUckac Erdin, Tuong Huynh, Mathieu Ferron, Gerard Karsenty, Michel C Vellard,[...]. EMBO J 2012
8

Endosome maturation.
Jatta Huotari, Ari Helenius. EMBO J 2011
8

An NAADP-gated two-pore channel targeted to the plasma membrane uncouples triggering from amplifying Ca2+ signals.
Eugen Brailoiu, Taufiq Rahman, Dev Churamani, David L Prole, G Cristina Brailoiu, Robert Hooper, Colin W Taylor, Sandip Patel. J Biol Chem 2010
138
8

Novel Role of TRPML2 in the Regulation of the Innate Immune Response.
Lu Sun, Yinan Hua, Silvia Vergarajauregui, Heba I Diab, Rosa Puertollano. J Immunol 2015
52
15

Selective agonist of TRPML2 reveals direct role in chemokine release from innate immune cells.
Eva Plesch, Cheng-Chang Chen, Elisabeth Butz, Anna Scotto Rosato, Einar K Krogsaeter, Hua Yinan, Karin Bartel, Marco Keller, Dina Robaa, Daniel Teupser,[...]. Elife 2018
46
17

The endoplasmic reticulum, not the pH gradient, drives calcium refilling of lysosomes.
Abigail G Garrity, Wuyang Wang, Crystal Md Collier, Sara A Levey, Qiong Gao, Haoxing Xu. Elife 2016
132
8

Structural mechanisms of phospholipid activation of the human TPC2 channel.
Ji She, Weizhong Zeng, Jiangtao Guo, Qingfeng Chen, Xiao-Chen Bai, Youxing Jiang. Elife 2019
62
12

Mucolipidosis type IV is caused by mutations in a gene encoding a novel transient receptor potential channel.
M Sun, E Goldin, S Stahl, J L Falardeau, J C Kennedy, J S Acierno, C Bove, C R Kaneski, J Nagle, M C Bromley,[...]. Hum Mol Genet 2000
318
7

TRPML1: The Ca(2+)retaker of the lysosome.
Simone Di Paola, Anna Scotto-Rosato, Diego Luis Medina. Cell Calcium 2018
64
10

Reconstituted human TPC1 is a proton-permeable ion channel and is activated by NAADP or Ca2+.
Samantha J Pitt, Andy K M Lam, Katja Rietdorf, Antony Galione, Rebecca Sitsapesan. Sci Signal 2014
70
10

Termination of autophagy and reformation of lysosomes regulated by mTOR.
Li Yu, Christina K McPhee, Lixin Zheng, Gonzalo A Mardones, Yueguang Rong, Junya Peng, Na Mi, Ying Zhao, Zhihua Liu, Fengyi Wan,[...]. Nature 2010
994
7

Phosphoinositide isoforms determine compartment-specific ion channel activity.
Xiaoli Zhang, Xinran Li, Haoxing Xu. Proc Natl Acad Sci U S A 2012
107
7

TRPML1 links lysosomal calcium to autophagosome biogenesis through the activation of the CaMKKβ/VPS34 pathway.
A Scotto Rosato, S Montefusco, C Soldati, S Di Paola, A Capuozzo, J Monfregola, E Polishchuk, A Amabile, C Grimm, A Lombardo,[...]. Nat Commun 2019
59
11

The lysosome: from waste bag to potential therapeutic target.
Hanna Appelqvist, Petra Wäster, Katarina Kågedal, Karin Öllinger. J Mol Cell Biol 2013
457
7


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.