A citation-based method for searching scientific literature

Mingkun Li, Roland Schröder, Shengyu Ni, Burkhard Madea, Mark Stoneking. Proc Natl Acad Sci U S A 2015
Times Cited: 106







List of co-cited articles
996 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity



Extensive pathogenicity of mitochondrial heteroplasmy in healthy human individuals.
Kaixiong Ye, Jian Lu, Fei Ma, Alon Keinan, Zhenglong Gu. Proc Natl Acad Sci U S A 2014
138
32

Heteroplasmic mitochondrial DNA mutations in normal and tumour cells.
Yiping He, Jian Wu, Devin C Dressman, Christine Iacobuzio-Donahue, Sanford D Markowitz, Victor E Velculescu, Luis A Diaz, Kenneth W Kinzler, Bert Vogelstein, Nickolas Papadopoulos. Nature 2010
369
31

Recurrent tissue-specific mtDNA mutations are common in humans.
David C Samuels, Chun Li, Bingshan Li, Zhuo Song, Eric Torstenson, Hayley Boyd Clay, Antonis Rokas, Tricia A Thornton-Wells, Jason H Moore, Tia M Hughes,[...]. PLoS Genet 2013
91
34

Detecting heteroplasmy from high-throughput sequencing of complete human mitochondrial DNA genomes.
Mingkun Li, Anna Schönberg, Michael Schaefer, Roland Schroeder, Ivane Nasidze, Mark Stoneking. Am J Hum Genet 2010
199
30

Mitochondrial DNA genetics and the heteroplasmy conundrum in evolution and disease.
Douglas C Wallace, Dimitra Chalkia. Cold Spring Harb Perspect Biol 2013
333
30

Universal heteroplasmy of human mitochondrial DNA.
Brendan A I Payne, Ian J Wilson, Patrick Yu-Wai-Man, Jonathan Coxhead, David Deehan, Rita Horvath, Robert W Taylor, David C Samuels, Mauro Santibanez-Koref, Patrick F Chinnery. Hum Mol Genet 2013
234
25

Reanalysis and revision of the Cambridge reference sequence for human mitochondrial DNA.
R M Andrews, I Kubacka, P F Chinnery, R N Lightowlers, D M Turnbull, N Howell. Nat Genet 1999
21

Evidence for frequent and tissue-specific sequence heteroplasmy in human mitochondrial DNA.
Jana Naue, Steffen Hörer, Timo Sänger, Christina Strobl, Petra Hatzer-Grubwieser, Walther Parson, Sabine Lutz-Bonengel. Mitochondrion 2015
55
38

The Sequence Alignment/Map format and SAMtools.
Heng Li, Bob Handsaker, Alec Wysoker, Tim Fennell, Jue Ruan, Nils Homer, Gabor Marth, Goncalo Abecasis, Richard Durbin. Bioinformatics 2009
21

Origins and functional consequences of somatic mitochondrial DNA mutations in human cancer.
Young Seok Ju, Ludmil B Alexandrov, Moritz Gerstung, Inigo Martincorena, Serena Nik-Zainal, Manasa Ramakrishna, Helen R Davies, Elli Papaemmanuil, Gunes Gundem, Adam Shlien,[...]. Elife 2014
211
21

Maternal age effect and severe germ-line bottleneck in the inheritance of human mitochondrial DNA.
Boris Rebolledo-Jaramillo, Marcia Shu-Wei Su, Nicholas Stoler, Jennifer A McElhoe, Benjamin Dickins, Daniel Blankenberg, Thorfinn S Korneliussen, Francesca Chiaromonte, Rasmus Nielsen, Mitchell M Holland,[...]. Proc Natl Acad Sci U S A 2014
118
20


Sequence and organization of the human mitochondrial genome.
S Anderson, A T Bankier, B G Barrell, M H de Bruijn, A R Coulson, J Drouin, I C Eperon, D P Nierlich, B A Roe, F Sanger,[...]. Nature 1981
19

Mitochondrial DNA heteroplasmy in the emerging field of massively parallel sequencing.
Rebecca S Just, Jodi A Irwin, Walther Parson. Forensic Sci Int Genet 2015
72
25


Transmission of human mtDNA heteroplasmy in the Genome of the Netherlands families: support for a variable-size bottleneck.
Mingkun Li, Rebecca Rothwell, Martijn Vermaat, Manja Wachsmuth, Roland Schröder, Jeroen F J Laros, Mannis van Oven, Paul I W de Bakker, Jasper A Bovenberg, Cornelia M van Duijn,[...]. Genome Res 2016
41
39


Mitochondrial DNA mutations in human disease.
Robert W Taylor, Doug M Turnbull. Nat Rev Genet 2005
15

HaploGrep 2: mitochondrial haplogroup classification in the era of high-throughput sequencing.
Hansi Weissensteiner, Dominic Pacher, Anita Kloss-Brandstätter, Lukas Forer, Günther Specht, Hans-Jürgen Bandelt, Florian Kronenberg, Antonio Salas, Sebastian Schönherr. Nucleic Acids Res 2016
317
15

Strong purifying selection in transmission of mammalian mitochondrial DNA.
James Bruce Stewart, Christoph Freyer, Joanna L Elson, Anna Wredenberg, Zekiye Cansu, Aleksandra Trifunovic, Nils-Göran Larsson. PLoS Biol 2008
327
14

Dynamics of mitochondrial heteroplasmy in three families investigated via a repeatable re-sequencing study.
Hiroki Goto, Benjamin Dickins, Enis Afgan, Ian M Paul, James Taylor, Kateryna D Makova, Anton Nekrutenko. Genome Biol 2011
76
18

Assessing Mitochondrial DNA Variation and Copy Number in Lymphocytes of ~2,000 Sardinians Using Tailored Sequencing Analysis Tools.
Jun Ding, Carlo Sidore, Thomas J Butler, Mary Kate Wing, Yong Qian, Osorio Meirelles, Fabio Busonero, Lam C Tsoi, Andrea Maschio, Andrea Angius,[...]. PLoS Genet 2015
58
24

Human mitochondrial DNA: roles of inherited and somatic mutations.
Eric A Schon, Salvatore DiMauro, Michio Hirano. Nat Rev Genet 2012
420
14

Mitochondrial threshold effects.
Rodrigue Rossignol, Benjamin Faustin, Christophe Rocher, Monique Malgat, Jean-Pierre Mazat, Thierry Letellier. Biochem J 2003
457
13

Segregation of mitochondrial DNA heteroplasmy through a developmental genetic bottleneck in human embryos.
Vasileios I Floros, Angela Pyle, Sabine Dietmann, Wei Wei, Walfred C W Tang, Naoko Irie, Brendan Payne, Antonio Capalbo, Laila Noli, Jonathan Coxhead,[...]. Nat Cell Biol 2018
82
15

DNA Commission of the International Society for Forensic Genetics: revised and extended guidelines for mitochondrial DNA typing.
W Parson, L Gusmão, D R Hares, J A Irwin, W R Mayr, N Morling, E Pokorak, M Prinz, A Salas, P M Schneider,[...]. Forensic Sci Int Genet 2014
145
12



Age-Related and Heteroplasmy-Related Variation in Human mtDNA Copy Number.
Manja Wachsmuth, Alexander Hübner, Mingkun Li, Burkhard Madea, Mark Stoneking. PLoS Genet 2016
81
14

A mouse model of mitochondrial disease reveals germline selection against severe mtDNA mutations.
Weiwei Fan, Katrina G Waymire, Navneet Narula, Peng Li, Christophe Rocher, Pinar E Coskun, Mani A Vannan, Jagat Narula, Grant R Macgregor, Douglas C Wallace. Science 2008
304
11

A reduction of mitochondrial DNA molecules during embryogenesis explains the rapid segregation of genotypes.
Lynsey M Cree, David C Samuels, Susana Chuva de Sousa Lopes, Harsha Karur Rajasimha, Passorn Wonnapinij, Jeffrey R Mann, Hans-Henrik M Dahl, Patrick F Chinnery. Nat Genet 2008
320
11

Very low-level heteroplasmy mtDNA variations are inherited in humans.
Yan Guo, Chung-I Li, Quanhu Sheng, Jeanette F Winther, Qiuyin Cai, John D Boice, Yu Shyr. J Genet Genomics 2013
34
32

Molecular poltergeists: mitochondrial DNA copies (numts) in sequenced nuclear genomes.
Einat Hazkani-Covo, Raymond M Zeller, William Martin. PLoS Genet 2010
329
11


Premature ageing in mice expressing defective mitochondrial DNA polymerase.
Aleksandra Trifunovic, Anna Wredenberg, Maria Falkenberg, Johannes N Spelbrink, Anja T Rovio, Carl E Bruder, Mohammad Bohlooly-Y, Sebastian Gidlöf, Anders Oldfors, Rolf Wibom,[...]. Nature 2004
11

Super-resolution microscopy reveals that mammalian mitochondrial nucleoids have a uniform size and frequently contain a single copy of mtDNA.
Christian Kukat, Christian A Wurm, Henrik Spåhr, Maria Falkenberg, Nils-Göran Larsson, Stefan Jakobs. Proc Natl Acad Sci U S A 2011
299
10

Mitochondria and cancer.
Douglas C Wallace. Nat Rev Cancer 2012
10

Fidelity of capture-enrichment for mtDNA genome sequencing: influence of NUMTs.
Mingkun Li, Roland Schroeder, Albert Ko, Mark Stoneking. Nucleic Acids Res 2012
68
14


Tissue-specific selection for different mtDNA genotypes in heteroplasmic mice.
J P Jenuth, A C Peterson, E A Shoubridge. Nat Genet 1997
287
10

Progressive increase in mtDNA 3243A>G heteroplasmy causes abrupt transcriptional reprogramming.
Martin Picard, Jiangwen Zhang, Saege Hancock, Olga Derbeneva, Ryan Golhar, Pawel Golik, Sean O'Hearn, Shawn Levy, Prasanth Potluri, Maria Lvova,[...]. Proc Natl Acad Sci U S A 2014
164
10

Investigation of heteroplasmy in the human mitochondrial DNA control region: a synthesis of observations from more than 5000 global population samples.
Jodi A Irwin, Jessica L Saunier, Harald Niederstätter, Katharine M Strouss, Kimberly A Sturk, Toni M Diegoli, Anita Brandstätter, Walther Parson, Thomas J Parsons. J Mol Evol 2009
105
10

Clonal expansion of early to mid-life mitochondrial DNA point mutations drives mitochondrial dysfunction during human ageing.
Laura C Greaves, Marco Nooteboom, Joanna L Elson, Helen A L Tuppen, Geoffrey A Taylor, Daniel M Commane, Ramesh P Arasaradnam, Konstantin Khrapko, Robert W Taylor, Thomas B L Kirkwood,[...]. PLoS Genet 2014
75
13

Mitochondrial DNA copy number variation across human cancers.
Ed Reznik, Martin L Miller, Yasin Şenbabaoğlu, Nadeem Riaz, Judy Sarungbam, Satish K Tickoo, Hikmat A Al-Ahmadie, William Lee, Venkatraman E Seshan, A Ari Hakimi,[...]. Elife 2016
224
10

MtDNA segregation in heteroplasmic tissues is common in vivo and modulated by haplotype differences and developmental stage.
Joerg Patrick Burgstaller, Iain G Johnston, Nick S Jones, Jana Albrechtová, Thomas Kolbe, Claus Vogl, Andreas Futschik, Corina Mayrhofer, Dieter Klein, Sonja Sabitzer,[...]. Cell Rep 2014
65
15

Oxidative stress is not a major contributor to somatic mitochondrial DNA mutations.
Leslie S Itsara, Scott R Kennedy, Edward J Fox, Selina Yu, Joshua J Hewitt, Monica Sanchez-Contreras, Fernando Cardozo-Pelaez, Leo J Pallanck. PLoS Genet 2014
100
10


Bottleneck and selection in the germline and maternal age influence transmission of mitochondrial DNA in human pedigrees.
Arslan A Zaidi, Peter R Wilton, Marcia Shu-Wei Su, Ian M Paul, Barbara Arbeithuber, Kate Anthony, Anton Nekrutenko, Rasmus Nielsen, Kateryna D Makova. Proc Natl Acad Sci U S A 2019
27
37

Development and assessment of an optimized next-generation DNA sequencing approach for the mtgenome using the Illumina MiSeq.
Jennifer A McElhoe, Mitchell M Holland, Kateryna D Makova, Marcia Shu-Wei Su, Ian M Paul, Christine H Baker, Seth A Faith, Brian Young. Forensic Sci Int Genet 2014
64
14


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.