A citation-based method for searching scientific literature

Mirjam S de Pagter, Markus J van Roosmalen, Annette F Baas, Ivo Renkens, Karen J Duran, Ellen van Binsbergen, Masoumeh Tavakoli-Yaraki, Ron Hochstenbach, Lars T van der Veken, Edwin Cuppen, Wigard P Kloosterman. Am J Hum Genet 2015
Times Cited: 46







List of co-cited articles
448 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Massive genomic rearrangement acquired in a single catastrophic event during cancer development.
Philip J Stephens, Chris D Greenman, Beiyuan Fu, Fengtang Yang, Graham R Bignell, Laura J Mudie, Erin D Pleasance, King Wai Lau, David Beare, Lucy A Stebbings,[...]. Cell 2011
73

Chromothripsis as a mechanism driving complex de novo structural rearrangements in the germline.
Wigard P Kloosterman, Victor Guryev, Mark van Roosmalen, Karen J Duran, Ewart de Bruijn, Saskia C M Bakker, Tom Letteboer, Bernadette van Nesselrooij, Ron Hochstenbach, Martin Poot,[...]. Hum Mol Genet 2011
202
69

Chromothripsis from DNA damage in micronuclei.
Cheng-Zhong Zhang, Alexander Spektor, Hauke Cornils, Joshua M Francis, Emily K Jackson, Shiwei Liu, Matthew Meyerson, David Pellman. Nature 2015
503
65

Chromosome catastrophes involve replication mechanisms generating complex genomic rearrangements.
Pengfei Liu, Ayelet Erez, Sandesh C Sreenath Nagamani, Shweta U Dhar, Katarzyna E Kołodziejska, Avinash V Dharmadhikari, M Lance Cooper, Joanna Wiszniewska, Feng Zhang, Marjorie A Withers,[...]. Cell 2011
278
63

DNA breaks and chromosome pulverization from errors in mitosis.
Karen Crasta, Neil J Ganem, Regina Dagher, Alexandra B Lantermann, Elena V Ivanova, Yunfeng Pan, Luigi Nezi, Alexei Protopopov, Dipanjan Chowdhury, David Pellman. Nature 2012
693
58

Complex reorganization and predominant non-homologous repair following chromosomal breakage in karyotypically balanced germline rearrangements and transgenic integration.
Colby Chiang, Jessie C Jacobsen, Carl Ernst, Carrie Hanscom, Adrian Heilbut, Ian Blumenthal, Ryan E Mills, Andrew Kirby, Amelia M Lindgren, Skye R Rudiger,[...]. Nat Genet 2012
167
56

Constitutional chromothripsis rearrangements involve clustered double-stranded DNA breaks and nonhomologous repair mechanisms.
Wigard P Kloosterman, Masoumeh Tavakoli-Yaraki, Markus J van Roosmalen, Ellen van Binsbergen, Ivo Renkens, Karen Duran, Lucia Ballarati, Sarah Vergult, Daniela Giardino, Kerstin Hansson,[...]. Cell Rep 2012
149
54

A germline chromothripsis event stably segregating in 11 individuals through three generations.
Birgitte Bertelsen, Lusine Nazaryan-Petersen, Wei Sun, Mana M Mehrjouy, Gangcai Xie, Wei Chen, Lena E Hjermind, Peter E M Taschner, Zeynep Tümer. Genet Med 2016
36
66


Criteria for inference of chromothripsis in cancer genomes.
Jan O Korbel, Peter J Campbell. Cell 2013
286
36

Chromothripsis in congenital disorders and cancer: similarities and differences.
Wigard P Kloosterman, Edwin Cuppen. Curr Opin Cell Biol 2013
62
34

Punctuated evolution of prostate cancer genomes.
Sylvan C Baca, Davide Prandi, Michael S Lawrence, Juan Miguel Mosquera, Alessandro Romanel, Yotam Drier, Kyung Park, Naoki Kitabayashi, Theresa Y MacDonald, Mahmoud Ghandi,[...]. Cell 2013
713
34

Chromothripsis and Kataegis Induced by Telomere Crisis.
John Maciejowski, Yilong Li, Nazario Bosco, Peter J Campbell, Titia de Lange. Cell 2015
303
34

Chromothripsis: potential origin in gametogenesis and preimplantation cell divisions. A review.
Franck Pellestor, Vincent Gatinois, Jacques Puechberty, David Geneviève, Geneviève Lefort. Fertil Steril 2014
41
36

Genome sequencing of pediatric medulloblastoma links catastrophic DNA rearrangements with TP53 mutations.
Tobias Rausch, David T W Jones, Marc Zapatka, Adrian M Stütz, Thomas Zichner, Joachim Weischenfeldt, Natalie Jäger, Marc Remke, David Shih, Paul A Northcott,[...]. Cell 2012
516
32

Germline Chromothripsis Driven by L1-Mediated Retrotransposition and Alu/Alu Homologous Recombination.
Lusine Nazaryan-Petersen, Birgitte Bertelsen, Mads Bak, Lars Jønson, Niels Tommerup, Dustin C Hancks, Zeynep Tümer. Hum Mutat 2016
34
44

Defining the diverse spectrum of inversions, complex structural variation, and chromothripsis in the morbid human genome.
Ryan L Collins, Harrison Brand, Claire E Redin, Carrie Hanscom, Caroline Antolik, Matthew R Stone, Joseph T Glessner, Tamara Mason, Giulia Pregno, Naghmeh Dorrani,[...]. Genome Biol 2017
84
32

Chromothriptic cure of WHIM syndrome.
David H McDermott, Ji-Liang Gao, Qian Liu, Marie Siwicki, Craig Martens, Paejonette Jacobs, Daniel Velez, Erin Yim, Christine R Bryke, Nancy Hsu,[...]. Cell 2015
107
30

Chromothripsis and beyond: rapid genome evolution from complex chromosomal rearrangements.
Cheng-Zhong Zhang, Mitchell L Leibowitz, David Pellman. Genes Dev 2013
153
30

Catastrophic cellular events leading to complex chromosomal rearrangements in the germline.
M Fukami, H Shima, E Suzuki, T Ogata, K Matsubara, T Kamimaki. Clin Genet 2017
24
54

Prenatal diagnosis of chromothripsis, with nine breaks characterized by karyotyping, FISH, microarray and whole-genome sequencing.
M J Macera, A Sobrino, B Levy, V Jobanputra, V Aggarwal, A Mills, C Esteves, C Hanscom, S Pereira, V Pillalamarri,[...]. Prenat Diagn 2015
22
54

Unbalanced translocations arise from diverse mutational mechanisms including chromothripsis.
Brooke Weckselblatt, Karen E Hermetz, M Katharine Rudd. Genome Res 2015
39
30

Cancer: When catastrophe strikes a cell.
Jose M C Tubio, Xavier Estivill. Nature 2011
50
26

Chromothripsis and cancer: causes and consequences of chromosome shattering.
Josep V Forment, Abderrahmane Kaidi, Stephen P Jackson. Nat Rev Cancer 2012
217
23

Sequencing of neuroblastoma identifies chromothripsis and defects in neuritogenesis genes.
Jan J Molenaar, Jan Koster, Danny A Zwijnenburg, Peter van Sluis, Linda J Valentijn, Ida van der Ploeg, Mohamed Hamdi, Johan van Nes, Bart A Westerman, Jennemiek van Arkel,[...]. Nature 2012
554
23

Chromothripsis: chromosomes in crisis.
Mathew J K Jones, Prasad V Jallepalli. Dev Cell 2012
96
23

A cell-based model system links chromothripsis with hyperploidy.
Balca R Mardin, Alexandros P Drainas, Sebastian M Waszak, Joachim Weischenfeldt, Mayumi Isokane, Adrian M Stütz, Benjamin Raeder, Theocharis Efthymiopoulos, Christopher Buccitelli, Maia Segura-Wang,[...]. Mol Syst Biol 2015
73
23

Prevalence and clinical implications of chromothripsis in cancer genomes.
Wigard P Kloosterman, Jan Koster, Jan J Molenaar. Curr Opin Oncol 2014
57
21

Chromothripsis-like chromosomal rearrangements induced by ionizing radiation using proton microbeam irradiation system.
Maki Morishita, Tomoki Muramatsu, Yumiko Suto, Momoki Hirai, Teruaki Konishi, Shin Hayashi, Daichi Shigemizu, Tatsuhiko Tsunoda, Keiji Moriyama, Johji Inazawa. Oncotarget 2016
31
32

A Distinct Class of Chromoanagenesis Events Characterized by Focal Copy Number Gains.
Heleen Masset, Matthew S Hestand, Hilde Van Esch, Pascale Kleinfinger, Julie Plaisancié, Alexandra Afenjar, Romain Molignier, Caroline Schluth-Bolard, Damien Sanlaville, Joris R Vermeesch. Hum Mutat 2016
20
50

Selective Y centromere inactivation triggers chromosome shattering in micronuclei and repair by non-homologous end joining.
Peter Ly, Levi S Teitz, Dong H Kim, Ofer Shoshani, Helen Skaletsky, Daniele Fachinetti, David C Page, Don W Cleveland. Nat Cell Biol 2017
115
21

The strength of combined cytogenetic and mate-pair sequencing techniques illustrated by a germline chromothripsis rearrangement involving FOXP2.
Lusine Nazaryan, Eunice G Stefanou, Claus Hansen, Nadezda Kosyakova, Mads Bak, Freddie H Sharkey, Theodora Mantziou, Anastasios D Papanastasiou, Voula Velissariou, Thomas Liehr,[...]. Eur J Hum Genet 2014
36
25

Breakpoint profiling of 64 cancer genomes reveals numerous complex rearrangements spawned by homology-independent mechanisms.
Ankit Malhotra, Michael Lindberg, Gregory G Faust, Mitchell L Leibowitz, Royden A Clark, Ryan M Layer, Aaron R Quinlan, Ira M Hall. Genome Res 2013
118
19

Complex chromosomal rearrangements: origin and meiotic behavior.
F Pellestor, T Anahory, G Lefort, J Puechberty, T Liehr, B Hédon, P Sarda. Hum Reprod Update 2011
87
19

The genomic landscape of balanced cytogenetic abnormalities associated with human congenital anomalies.
Claire Redin, Harrison Brand, Ryan L Collins, Tammy Kammin, Elyse Mitchell, Jennelle C Hodge, Carrie Hanscom, Vamsee Pillalamarri, Catarina M Seabra, Mary-Alice Abbott,[...]. Nat Genet 2017
126
19

Molecular dissection of germline chromothripsis in a developmental context using patient-derived iPS cells.
Sjors Middelkamp, Sebastiaan van Heesch, A Koen Braat, Joep de Ligt, Maarten van Iterson, Marieke Simonis, Markus J van Roosmalen, Martijn J E Kelder, Evelien Kruisselbrink, Ron Hochstenbach,[...]. Genome Med 2017
13
69

Very short DNA segments can be detected and handled by the repair machinery during germline chromothriptic chromosome reassembly.
Zuzana Slamova, Lusine Nazaryan-Petersen, Mana M Mehrjouy, Jana Drabova, Miroslava Hancarova, Tatana Marikova, Drahuse Novotna, Marketa Vlckova, Zdenka Vlckova, Mads Bak,[...]. Hum Mutat 2018
15
60


Constitutional chromoanasynthesis: description of a rare chromosomal event in a patient.
Julie Plaisancié, Pascale Kleinfinger, Claude Cances, Anne Bazin, Sophie Julia, Detlef Trost, Laurence Lohmann, Adeline Vigouroux. Eur J Med Genet 2014
25
32

Stress induced by premature chromatin condensation triggers chromosome shattering and chromothripsis at DNA sites still replicating in micronuclei or multinucleate cells when primary nuclei enter mitosis.
Georgia I Terzoudi, Maria Karakosta, Antonio Pantelias, Vasiliki I Hatzi, Ioanna Karachristou, Gabriel Pantelias. Mutat Res Genet Toxicol Environ Mutagen 2015
24
33




The Iceberg under Water: Unexplored Complexity of Chromoanagenesis in Congenital Disorders.
Cinthya J Zepeda-Mendoza, Cynthia C Morton. Am J Hum Genet 2019
16
50

Mechanisms of change in gene copy number.
P J Hastings, James R Lupski, Susan M Rosenberg, Grzegorz Ira. Nat Rev Genet 2009
718
15

Complex human chromosomal and genomic rearrangements.
Feng Zhang, Claudia M B Carvalho, James R Lupski. Trends Genet 2009
179
15

Catastrophic chromosomal restructuring during genome elimination in plants.
Ek Han Tan, Isabelle M Henry, Maruthachalam Ravi, Keith R Bradnam, Terezie Mandakova, Mohan Pa Marimuthu, Ian Korf, Martin A Lysak, Luca Comai, Simon Wl Chan. Elife 2015
53
15

Catastrophic nuclear envelope collapse in cancer cell micronuclei.
Emily M Hatch, Andrew H Fischer, Thomas J Deerinck, Martin W Hetzer. Cell 2013
313
15

Chromothripsis-like patterns are recurring but heterogeneously distributed features in a survey of 22,347 cancer genome screens.
Haoyang Cai, Nitin Kumar, Homayoun C Bagheri, Christian von Mering, Mark D Robinson, Michael Baudis. BMC Genomics 2014
70
15

Human Structural Variation: Mechanisms of Chromosome Rearrangements.
Brooke Weckselblatt, M Katharine Rudd. Trends Genet 2015
91
15


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.