A citation-based method for searching scientific literature

Agnieszka Rybak-Wolf, Christin Stottmeister, Petar Glažar, Marvin Jens, Natalia Pino, Sebastian Giusti, Mor Hanan, Mikaela Behm, Osnat Bartok, Reut Ashwal-Fluss, Margareta Herzog, Luisa Schreyer, Panagiotis Papavasileiou, Andranik Ivanov, Marie Öhman, Damian Refojo, Sebastian Kadener, Nikolaus Rajewsky. Mol Cell 2015
Times Cited: 1373







List of co-cited articles
704 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Circular RNAs are a large class of animal RNAs with regulatory potency.
Sebastian Memczak, Marvin Jens, Antigoni Elefsinioti, Francesca Torti, Janna Krueger, Agnieszka Rybak, Luisa Maier, Sebastian D Mackowiak, Lea H Gregersen, Mathias Munschauer,[...]. Nature 2013
53

Natural RNA circles function as efficient microRNA sponges.
Thomas B Hansen, Trine I Jensen, Bettina H Clausen, Jesper B Bramsen, Bente Finsen, Christian K Damgaard, Jørgen Kjems. Nature 2013
45

Circular RNAs are abundant, conserved, and associated with ALU repeats.
William R Jeck, Jessica A Sorrentino, Kai Wang, Michael K Slevin, Christin E Burd, Jinze Liu, William F Marzluff, Norman E Sharpless. RNA 2013
44

circRNA biogenesis competes with pre-mRNA splicing.
Reut Ashwal-Fluss, Markus Meyer, Nagarjuna Reddy Pamudurti, Andranik Ivanov, Osnat Bartok, Mor Hanan, Naveh Evantal, Sebastian Memczak, Nikolaus Rajewsky, Sebastian Kadener. Mol Cell 2014
35

Circular intronic long noncoding RNAs.
Yang Zhang, Xiao-Ou Zhang, Tian Chen, Jian-Feng Xiang, Qing-Fei Yin, Yu-Hang Xing, Shanshan Zhu, Li Yang, Ling-Ling Chen. Mol Cell 2013
31

Circular RNAs are the predominant transcript isoform from hundreds of human genes in diverse cell types.
Julia Salzman, Charles Gawad, Peter Lincoln Wang, Norman Lacayo, Patrick O Brown. PLoS One 2012
26

Circ-ZNF609 Is a Circular RNA that Can Be Translated and Functions in Myogenesis.
Ivano Legnini, Gaia Di Timoteo, Francesca Rossi, Mariangela Morlando, Francesca Briganti, Olga Sthandier, Alessandro Fatica, Tiziana Santini, Adrian Andronache, Mark Wade,[...]. Mol Cell 2017
25

Exon-intron circular RNAs regulate transcription in the nucleus.
Zhaoyong Li, Chuan Huang, Chun Bao, Liang Chen, Mei Lin, Xiaolin Wang, Guolin Zhong, Bin Yu, Wanchen Hu, Limin Dai,[...]. Nat Struct Mol Biol 2015
25

The biogenesis, biology and characterization of circular RNAs.
Lasse S Kristensen, Maria S Andersen, Lotte V W Stagsted, Karoline K Ebbesen, Thomas B Hansen, Jørgen Kjems. Nat Rev Genet 2019
22

Extensive translation of circular RNAs driven by N6-methyladenosine.
Yun Yang, Xiaojuan Fan, Miaowei Mao, Xiaowei Song, Ping Wu, Yang Zhang, Yongfeng Jin, Yi Yang, Ling-Ling Chen, Yang Wang,[...]. Cell Res 2017
969
22

Complementary sequence-mediated exon circularization.
Xiao-Ou Zhang, Hai-Bin Wang, Yang Zhang, Xuhua Lu, Ling-Ling Chen, Li Yang. Cell 2014
21

Detecting and characterizing circular RNAs.
William R Jeck, Norman E Sharpless. Nat Biotechnol 2014
20

Viroids are single-stranded covalently closed circular RNA molecules existing as highly base-paired rod-like structures.
H L Sanger, G Klotz, D Riesner, H J Gross, A K Kleinschmidt. Proc Natl Acad Sci U S A 1976
19

Circular RNA profiling reveals an abundant circHIPK3 that regulates cell growth by sponging multiple miRNAs.
Qiupeng Zheng, Chunyang Bao, Weijie Guo, Shuyi Li, Jie Chen, Bing Chen, Yanting Luo, Dongbin Lyu, Yan Li, Guohai Shi,[...]. Nat Commun 2016
19

The RNA binding protein quaking regulates formation of circRNAs.
Simon J Conn, Katherine A Pillman, John Toubia, Vanessa M Conn, Marika Salmanidis, Caroline A Phillips, Suraya Roslan, Andreas W Schreiber, Philip A Gregory, Gregory J Goodall. Cell 2015
19

Cell-type specific features of circular RNA expression.
Julia Salzman, Raymond E Chen, Mari N Olsen, Peter L Wang, Patrick O Brown. PLoS Genet 2013
19

Genome-wide analysis of drosophila circular RNAs reveals their structural and sequence properties and age-dependent neural accumulation.
Jakub O Westholm, Pedro Miura, Sara Olson, Sol Shenker, Brian Joseph, Piero Sanfilippo, Susan E Celniker, Brenton R Graveley, Eric C Lai. Cell Rep 2014
604
18

Translation of CircRNAs.
Nagarjuna Reddy Pamudurti, Osnat Bartok, Marvin Jens, Reut Ashwal-Fluss, Christin Stottmeister, Larissa Ruhe, Mor Hanan, Emanuel Wyler, Daniel Perez-Hernandez, Evelyn Ramberger,[...]. Mol Cell 2017
998
18

Foxo3 circular RNA retards cell cycle progression via forming ternary complexes with p21 and CDK2.
William W Du, Weining Yang, Elizabeth Liu, Zhenguo Yang, Preet Dhaliwal, Burton B Yang. Nucleic Acids Res 2016
18

The Landscape of Circular RNA in Cancer.
Josh N Vo, Marcin Cieslik, Yajia Zhang, Sudhanshu Shukla, Lanbo Xiao, Yuping Zhang, Yi-Mi Wu, Saravana M Dhanasekaran, Carl G Engelke, Xuhong Cao,[...]. Cell 2019
764
18

Circular RNA is enriched and stable in exosomes: a promising biomarker for cancer diagnosis.
Yan Li, Qiupeng Zheng, Chunyang Bao, Shuyi Li, Weijie Guo, Jiang Zhao, Di Chen, Jianren Gu, Xianghuo He, Shenglin Huang. Cell Res 2015
17

Expanded identification and characterization of mammalian circular RNAs.
Junjie U Guo, Vikram Agarwal, Huili Guo, David P Bartel. Genome Biol 2014
17

Analysis of intron sequences reveals hallmarks of circular RNA biogenesis in animals.
Andranik Ivanov, Sebastian Memczak, Emanuel Wyler, Francesca Torti, Hagit T Porath, Marta R Orejuela, Michael Piechotta, Erez Y Levanon, Markus Landthaler, Christoph Dieterich,[...]. Cell Rep 2015
652
17

Loss of a mammalian circular RNA locus causes miRNA deregulation and affects brain function.
Monika Piwecka, Petar Glažar, Luis R Hernandez-Miranda, Sebastian Memczak, Susanne A Wolf, Agnieszka Rybak-Wolf, Andrei Filipchyk, Filippos Klironomos, Cledi Alicia Cerda Jara, Pascal Fenske,[...]. Science 2017
684
16

Identification of HuR target circular RNAs uncovers suppression of PABPN1 translation by CircPABPN1.
Kotb Abdelmohsen, Amaresh C Panda, Rachel Munk, Ioannis Grammatikakis, Dawood B Dudekula, Supriyo De, Jiyoung Kim, Ji Heon Noh, Kyoung Mi Kim, Jennifer L Martindale,[...]. RNA Biol 2017
478
15


Exon circularization requires canonical splice signals.
Stefan Starke, Isabelle Jost, Oliver Rossbach, Tim Schneider, Silke Schreiner, Lee-Hsueh Hung, Albrecht Bindereif. Cell Rep 2015
489
14

Neural circular RNAs are derived from synaptic genes and regulated by development and plasticity.
Xintian You, Irena Vlatkovic, Ana Babic, Tristan Will, Irina Epstein, Georgi Tushev, Güney Akbalik, Mantian Wang, Caspar Glock, Claudia Quedenau,[...]. Nat Neurosci 2015
708
14

The Biogenesis, Functions, and Challenges of Circular RNAs.
Xiang Li, Li Yang, Ling-Ling Chen. Mol Cell 2018
12

Foxo3 circular RNA promotes cardiac senescence by modulating multiple factors associated with stress and senescence responses.
William W Du, Weining Yang, Yu Chen, Zhong-Kai Wu, Francis Stuart Foster, Zhenguo Yang, Xiangmin Li, Burton B Yang. Eur Heart J 2017
465
12

Novel Role of FBXW7 Circular RNA in Repressing Glioma Tumorigenesis.
Yibing Yang, Xinya Gao, Maolei Zhang, Sheng Yan, Chengjun Sun, Feizhe Xiao, Nunu Huang, Xuesong Yang, Kun Zhao, Huangkai Zhou,[...]. J Natl Cancer Inst 2018
622
12

Circular transcripts of the testis-determining gene Sry in adult mouse testis.
B Capel, A Swain, S Nicolis, A Hacker, M Walter, P Koopman, P Goodfellow, R Lovell-Badge. Cell 1993
791
12

Diverse alternative back-splicing and alternative splicing landscape of circular RNAs.
Xiao-Ou Zhang, Rui Dong, Yang Zhang, Jia-Lin Zhang, Zheng Luo, Jun Zhang, Ling-Ling Chen, Li Yang. Genome Res 2016
508
11


Characterization of RNase R-digested cellular RNA source that consists of lariat and circular RNAs from pre-mRNA splicing.
Hitoshi Suzuki, Yuhong Zuo, Jinhua Wang, Michael Q Zhang, Arun Malhotra, Akila Mayeda. Nucleic Acids Res 2006
404
11

The biogenesis and emerging roles of circular RNAs.
Ling-Ling Chen. Nat Rev Mol Cell Biol 2016
11

Mis-splicing yields circular RNA molecules.
C Cocquerelle, B Mascrez, D Hétuin, B Bailleul. FASEB J 1993
757
11

Using circular RNA as a novel type of biomarker in the screening of gastric cancer.
Peifei Li, Shengcan Chen, Huilin Chen, Xiaoyan Mo, Tianwen Li, Yongfu Shao, Bingxiu Xiao, Junming Guo. Clin Chim Acta 2015
589
11

circBase: a database for circular RNAs.
Petar Glažar, Panagiotis Papavasileiou, Nikolaus Rajewsky. RNA 2014
997
10

Induction of tumor apoptosis through a circular RNA enhancing Foxo3 activity.
William W Du, Ling Fang, Weining Yang, Nan Wu, Faryal Mehwish Awan, Zhenguo Yang, Burton B Yang. Cell Death Differ 2017
396
9

CircInteractome: A web tool for exploring circular RNAs and their interacting proteins and microRNAs.
Dawood B Dudekula, Amaresh C Panda, Ioannis Grammatikakis, Supriyo De, Kotb Abdelmohsen, Myriam Gorospe. RNA Biol 2016
654
9

FUS affects circular RNA expression in murine embryonic stem cell-derived motor neurons.
Lorenzo Errichelli, Stefano Dini Modigliani, Pietro Laneve, Alessio Colantoni, Ivano Legnini, Davide Capauto, Alessandro Rosa, Riccardo De Santis, Rebecca Scarfò, Giovanna Peruzzi,[...]. Nat Commun 2017
267
9

DHX9 suppresses RNA processing defects originating from the Alu invasion of the human genome.
Tuğçe Aktaş, İbrahim Avşar Ilık, Daniel Maticzka, Vivek Bhardwaj, Cecilia Pessoa Rodrigues, Gerhard Mittler, Thomas Manke, Rolf Backofen, Asifa Akhtar. Nature 2017
282
9

Short intronic repeat sequences facilitate circular RNA production.
Dongming Liang, Jeremy E Wilusz. Genes Dev 2014
580
8

Regulation of circRNA biogenesis.
Ling-Ling Chen, Li Yang. RNA Biol 2015
8

An atlas of cortical circular RNA expression in Alzheimer disease brains demonstrates clinical and pathological associations.
Umber Dube, Jorge L Del-Aguila, Zeran Li, John P Budde, Shan Jiang, Simon Hsu, Laura Ibanez, Maria Victoria Fernandez, Fabiana Farias, Joanne Norton,[...]. Nat Neurosci 2019
130
8

A map of human circular RNAs in clinically relevant tissues.
Philipp G Maass, Petar Glažar, Sebastian Memczak, Gunnar Dittmar, Irene Hollfinger, Luisa Schreyer, Aisha V Sauer, Okan Toka, Alessandro Aiuti, Friedrich C Luft,[...]. J Mol Med (Berl) 2017
200
8

A peptide encoded by circular form of LINC-PINT suppresses oncogenic transcriptional elongation in glioblastoma.
Maolei Zhang, Kun Zhao, Xiaoping Xu, Yibing Yang, Sheng Yan, Ping Wei, Hui Liu, Jianbo Xu, Feizhe Xiao, Huangkai Zhou,[...]. Nat Commun 2018
359
8

A circular RNA protects the heart from pathological hypertrophy and heart failure by targeting miR-223.
Kun Wang, Bo Long, Fang Liu, Jian-Xun Wang, Cui-Yun Liu, Bing Zhao, Lu-Yu Zhou, Teng Sun, Man Wang, Tao Yu,[...]. Eur Heart J 2016
594
8

CIRCpedia v2: An Updated Database for Comprehensive Circular RNA Annotation and Expression Comparison.
Rui Dong, Xu-Kai Ma, Guo-Wei Li, Li Yang. Genomics Proteomics Bioinformatics 2018
125
8


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.