A citation-based method for searching scientific literature

Daniel Erny, Anna Lena Hrabě de Angelis, Diego Jaitin, Peter Wieghofer, Ori Staszewski, Eyal David, Hadas Keren-Shaul, Tanel Mahlakoiv, Kristin Jakobshagen, Thorsten Buch, Vera Schwierzeck, Olaf Utermöhlen, Eunyoung Chun, Wendy S Garrett, Kathy D McCoy, Andreas Diefenbach, Peter Staeheli, Bärbel Stecher, Ido Amit, Marco Prinz. Nat Neurosci 2015
Times Cited: 1189







List of co-cited articles
1672 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


The gut microbiota influences blood-brain barrier permeability in mice.
Viorica Braniste, Maha Al-Asmakh, Czeslawa Kowal, Farhana Anuar, Afrouz Abbaspour, Miklós Tóth, Agata Korecka, Nadja Bakocevic, Lai Guan Ng, Parag Kundu,[...]. Sci Transl Med 2014
834
37

Gut Microbiota Regulate Motor Deficits and Neuroinflammation in a Model of Parkinson's Disease.
Timothy R Sampson, Justine W Debelius, Taren Thron, Stefan Janssen, Gauri G Shastri, Zehra Esra Ilhan, Collin Challis, Catherine E Schretter, Sandra Rocha, Viviana Gradinaru,[...]. Cell 2016
27

Normal gut microbiota modulates brain development and behavior.
Rochellys Diaz Heijtz, Shugui Wang, Farhana Anuar, Yu Qian, Britta Björkholm, Annika Samuelsson, Martin L Hibberd, Hans Forssberg, Sven Pettersson. Proc Natl Acad Sci U S A 2011
24

The Microbiota-Gut-Brain Axis.
John F Cryan, Kenneth J O'Riordan, Caitlin S M Cowan, Kiran V Sandhu, Thomaz F S Bastiaanssen, Marcus Boehme, Martin G Codagnone, Sofia Cussotto, Christine Fulling, Anna V Golubeva,[...]. Physiol Rev 2019
590
21

Ingestion of Lactobacillus strain regulates emotional behavior and central GABA receptor expression in a mouse via the vagus nerve.
Javier A Bravo, Paul Forsythe, Marianne V Chew, Emily Escaravage, Hélène M Savignac, Timothy G Dinan, John Bienenstock, John F Cryan. Proc Natl Acad Sci U S A 2011
20


Gut microbiome alterations in Alzheimer's disease.
Nicholas M Vogt, Robert L Kerby, Kimberly A Dill-McFarland, Sandra J Harding, Andrew P Merluzzi, Sterling C Johnson, Cynthia M Carlsson, Sanjay Asthana, Henrik Zetterberg, Kaj Blennow,[...]. Sci Rep 2017
490
19

Postnatal microbial colonization programs the hypothalamic-pituitary-adrenal system for stress response in mice.
Nobuyuki Sudo, Yoichi Chida, Yuji Aiba, Junko Sonoda, Naomi Oyama, Xiao-Nian Yu, Chiharu Kubo, Yasuhiro Koga. J Physiol 2004
18

Interactions between the microbiota, immune and nervous systems in health and disease.
Thomas C Fung, Christine A Olson, Elaine Y Hsiao. Nat Neurosci 2017
630
17

From Dietary Fiber to Host Physiology: Short-Chain Fatty Acids as Key Bacterial Metabolites.
Ara Koh, Filipe De Vadder, Petia Kovatcheva-Datchary, Fredrik Bäckhed. Cell 2016
16

Indigenous bacteria from the gut microbiota regulate host serotonin biosynthesis.
Jessica M Yano, Kristie Yu, Gregory P Donaldson, Gauri G Shastri, Phoebe Ann, Liang Ma, Cathryn R Nagler, Rustem F Ismagilov, Sarkis K Mazmanian, Elaine Y Hsiao. Cell 2015
15

Reduced anxiety-like behavior and central neurochemical change in germ-free mice.
K M Neufeld, N Kang, J Bienenstock, J A Foster. Neurogastroenterol Motil 2011
725
15

Altered fecal microbiota composition in patients with major depressive disorder.
Haiyin Jiang, Zongxin Ling, Yonghua Zhang, Hongjin Mao, Zhanping Ma, Yan Yin, Weihong Wang, Wenxin Tang, Zhonglin Tan, Jianfei Shi,[...]. Brain Behav Immun 2015
802
15

The microbiome-gut-brain axis during early life regulates the hippocampal serotonergic system in a sex-dependent manner.
G Clarke, S Grenham, P Scully, P Fitzgerald, R D Moloney, F Shanahan, T G Dinan, J F Cryan. Mol Psychiatry 2013
833
14

Serotonin, tryptophan metabolism and the brain-gut-microbiome axis.
S M O'Mahony, G Clarke, Y E Borre, T G Dinan, J F Cryan. Behav Brain Res 2015
707
13

Gut microbiota are related to Parkinson's disease and clinical phenotype.
Filip Scheperjans, Velma Aho, Pedro A B Pereira, Kaisa Koskinen, Lars Paulin, Eero Pekkonen, Elena Haapaniemi, Seppo Kaakkola, Johanna Eerola-Rautio, Marjatta Pohja,[...]. Mov Disord 2015
769
13

The microbial metabolites, short-chain fatty acids, regulate colonic Treg cell homeostasis.
Patrick M Smith, Michael R Howitt, Nicolai Panikov, Monia Michaud, Carey Ann Gallini, Mohammad Bohlooly-Y, Jonathan N Glickman, Wendy S Garrett. Science 2013
13

Short chain fatty acids and gut microbiota differ between patients with Parkinson's disease and age-matched controls.
Marcus M Unger, Jörg Spiegel, Klaus-Ulrich Dillmann, David Grundmann, Hannah Philippeit, Jan Bürmann, Klaus Faßbender, Andreas Schwiertz, Karl-Herbert Schäfer. Parkinsonism Relat Disord 2016
401
13

Colonic bacterial composition in Parkinson's disease.
Ali Keshavarzian, Stefan J Green, Phillip A Engen, Robin M Voigt, Ankur Naqib, Christopher B Forsyth, Ece Mutlu, Kathleen M Shannon. Mov Disord 2015
481
13

Type I interferons and microbial metabolites of tryptophan modulate astrocyte activity and central nervous system inflammation via the aryl hydrocarbon receptor.
Veit Rothhammer, Ivan D Mascanfroni, Lukas Bunse, Maisa C Takenaka, Jessica E Kenison, Lior Mayo, Chun-Cheih Chao, Bonny Patel, Raymond Yan, Manon Blain,[...]. Nat Med 2016
521
12

Gut Microbiota Regulation of Tryptophan Metabolism in Health and Disease.
Allison Agus, Julien Planchais, Harry Sokol. Cell Host Microbe 2018
499
12

Metabolites produced by commensal bacteria promote peripheral regulatory T-cell generation.
Nicholas Arpaia, Clarissa Campbell, Xiying Fan, Stanislav Dikiy, Joris van der Veeken, Paul deRoos, Hui Liu, Justin R Cross, Klaus Pfeffer, Paul J Coffer,[...]. Nature 2013
12

Association of brain amyloidosis with pro-inflammatory gut bacterial taxa and peripheral inflammation markers in cognitively impaired elderly.
Annamaria Cattaneo, Nadia Cattane, Samantha Galluzzi, Stefania Provasi, Nicola Lopizzo, Cristina Festari, Clarissa Ferrari, Ugo Paolo Guerra, Barbara Paghera, Cristina Muscio,[...]. Neurobiol Aging 2017
362
12

Gut microbiome remodeling induces depressive-like behaviors through a pathway mediated by the host's metabolism.
P Zheng, B Zeng, C Zhou, M Liu, Z Fang, X Xu, L Zeng, J Chen, S Fan, X Du,[...]. Mol Psychiatry 2016
688
12

Antibiotic-induced perturbations in gut microbial diversity influences neuro-inflammation and amyloidosis in a murine model of Alzheimer's disease.
Myles R Minter, Can Zhang, Vanessa Leone, Daina L Ringus, Xiaoqiong Zhang, Paul Oyler-Castrillo, Mark W Musch, Fan Liao, Joseph F Ward, David M Holtzman,[...]. Sci Rep 2016
256
12

Gut microbiota, metabolites and host immunity.
Michelle G Rooks, Wendy S Garrett. Nat Rev Immunol 2016
11

Microbiome Influences Prenatal and Adult Microglia in a Sex-Specific Manner.
Morgane Sonia Thion, Donovan Low, Aymeric Silvin, Jinmiao Chen, Pauline Grisel, Jonas Schulte-Schrepping, Ronnie Blecher, Thomas Ulas, Paola Squarzoni, Guillaume Hoeffel,[...]. Cell 2018
289
11

The role of short-chain fatty acids in microbiota-gut-brain communication.
Boushra Dalile, Lukas Van Oudenhove, Bram Vervliet, Kristin Verbeke. Nat Rev Gastroenterol Hepatol 2019
396
11

The neuroactive potential of the human gut microbiota in quality of life and depression.
Mireia Valles-Colomer, Gwen Falony, Youssef Darzi, Ettje F Tigchelaar, Jun Wang, Raul Y Tito, Carmen Schiweck, Alexander Kurilshikov, Marie Joossens, Cisca Wijmenga,[...]. Nat Microbiol 2019
457
11

Reduction of Abeta amyloid pathology in APPPS1 transgenic mice in the absence of gut microbiota.
T Harach, N Marungruang, N Duthilleul, V Cheatham, K D Mc Coy, G Frisoni, J J Neher, F Fåk, M Jucker, T Lasser,[...]. Sci Rep 2017
305
11

A human gut microbial gene catalogue established by metagenomic sequencing.
Junjie Qin, Ruiqiang Li, Jeroen Raes, Manimozhiyan Arumugam, Kristoffer Solvsten Burgdorf, Chaysavanh Manichanh, Trine Nielsen, Nicolas Pons, Florence Levenez, Takuji Yamada,[...]. Nature 2010
11

The Role of Short-Chain Fatty Acids From Gut Microbiota in Gut-Brain Communication.
Ygor Parladore Silva, Andressa Bernardi, Rudimar Luiz Frozza. Front Endocrinol (Lausanne) 2020
225
11

Regulation of prefrontal cortex myelination by the microbiota.
A E Hoban, R M Stilling, F J Ryan, F Shanahan, T G Dinan, M J Claesson, G Clarke, J F Cryan. Transl Psychiatry 2016
260
10

Human gut microbiome viewed across age and geography.
Tanya Yatsunenko, Federico E Rey, Mark J Manary, Indi Trehan, Maria Gloria Dominguez-Bello, Monica Contreras, Magda Magris, Glida Hidalgo, Robert N Baldassano, Andrey P Anokhin,[...]. Nature 2012
10

Long-term benefit of Microbiota Transfer Therapy on autism symptoms and gut microbiota.
Dae-Wook Kang, James B Adams, Devon M Coleman, Elena L Pollard, Juan Maldonado, Sharon McDonough-Means, J Gregory Caporaso, Rosa Krajmalnik-Brown. Sci Rep 2019
155
10

The intestinal microbiota affect central levels of brain-derived neurotropic factor and behavior in mice.
Premysl Bercik, Emmanuel Denou, Josh Collins, Wendy Jackson, Jun Lu, Jennifer Jury, Yikang Deng, Patricia Blennerhassett, Joseph Macri, Kathy D McCoy,[...]. Gastroenterology 2011
843
10

A Unique Microglia Type Associated with Restricting Development of Alzheimer's Disease.
Hadas Keren-Shaul, Amit Spinrad, Assaf Weiner, Orit Matcovitch-Natan, Raz Dvir-Szternfeld, Tyler K Ulland, Eyal David, Kuti Baruch, David Lara-Astaiso, Beata Toth,[...]. Cell 2017
10

The short-chain fatty acid acetate reduces appetite via a central homeostatic mechanism.
Gary Frost, Michelle L Sleeth, Meliz Sahuri-Arisoylu, Blanca Lizarbe, Sebastian Cerdan, Leigh Brody, Jelena Anastasovska, Samar Ghourab, Mohammed Hankir, Shuai Zhang,[...]. Nat Commun 2014
582
9

Transferring the blues: Depression-associated gut microbiota induces neurobehavioural changes in the rat.
John R Kelly, Yuliya Borre, Ciaran O' Brien, Elaine Patterson, Sahar El Aidy, Jennifer Deane, Paul J Kennedy, Sasja Beers, Karen Scott, Gerard Moloney,[...]. J Psychiatr Res 2016
546
9

Microglia development follows a stepwise program to regulate brain homeostasis.
Orit Matcovitch-Natan, Deborah R Winter, Amir Giladi, Stephanie Vargas Aguilar, Amit Spinrad, Sandrine Sarrazin, Hila Ben-Yehuda, Eyal David, Fabiola Zelada González, Pierre Perrin,[...]. Science 2016
522
9

Commensal microbiota affects ischemic stroke outcome by regulating intestinal γδ T cells.
Corinne Benakis, David Brea, Silvia Caballero, Giuseppe Faraco, Jamie Moore, Michelle Murphy, Giulia Sita, Gianfranco Racchumi, Lilan Ling, Eric G Pamer,[...]. Nat Med 2016
382
9

The interplay between the intestinal microbiota and the brain.
Stephen M Collins, Michael Surette, Premysl Bercik. Nat Rev Microbiol 2012
775
9

Gut microbiota from multiple sclerosis patients enables spontaneous autoimmune encephalomyelitis in mice.
Kerstin Berer, Lisa Ann Gerdes, Egle Cekanaviciute, Xiaoming Jia, Liang Xiao, Zhongkui Xia, Chuan Liu, Luisa Klotz, Uta Stauffer, Sergio E Baranzini,[...]. Proc Natl Acad Sci U S A 2017
356
9

Probiotic Bifidobacterium longum NCC3001 Reduces Depression Scores and Alters Brain Activity: A Pilot Study in Patients With Irritable Bowel Syndrome.
Maria Ines Pinto-Sanchez, Geoffrey B Hall, Kathy Ghajar, Andrea Nardelli, Carolina Bolino, Jennifer T Lau, Francois-Pierre Martin, Ornella Cominetti, Christopher Welsh, Amber Rieder,[...]. Gastroenterology 2017
274
9

Neuroprotective effects of fecal microbiota transplantation on MPTP-induced Parkinson's disease mice: Gut microbiota, glial reaction and TLR4/TNF-α signaling pathway.
Meng-Fei Sun, Ying-Li Zhu, Zhi-Lan Zhou, Xue-Bing Jia, Yi-Da Xu, Qin Yang, Chun Cui, Yan-Qin Shen. Brain Behav Immun 2018
168
9

Correlation between the human fecal microbiota and depression.
A Naseribafrouei, K Hestad, E Avershina, M Sekelja, A Linløkken, R Wilson, K Rudi. Neurogastroenterol Motil 2014
461
9

Gut Microbiota is Altered in Patients with Alzheimer's Disease.
Zhen-Qian Zhuang, Lin-Lin Shen, Wei-Wei Li, Xue Fu, Fan Zeng, Li Gui, Yang Lü, Min Cai, Chi Zhu, Yin-Ling Tan,[...]. J Alzheimers Dis 2018
207
9

The gut-brain axis: interactions between enteric microbiota, central and enteric nervous systems.
Marilia Carabotti, Annunziata Scirocco, Maria Antonietta Maselli, Carola Severi. Ann Gastroenterol 2015
708
9

Breaking down the barriers: the gut microbiome, intestinal permeability and stress-related psychiatric disorders.
John R Kelly, Paul J Kennedy, John F Cryan, Timothy G Dinan, Gerard Clarke, Niall P Hyland. Front Cell Neurosci 2015
426
8

Microbiota modulate behavioral and physiological abnormalities associated with neurodevelopmental disorders.
Elaine Y Hsiao, Sara W McBride, Sophia Hsien, Gil Sharon, Embriette R Hyde, Tyler McCue, Julian A Codelli, Janet Chow, Sarah E Reisman, Joseph F Petrosino,[...]. Cell 2013
8


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.