A citation-based method for searching scientific literature

Kiichi Nakahira, Shu Hisata, Augustine M K Choi. Antioxid Redox Signal 2015
Times Cited: 117







List of co-cited articles
985 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Circulating mitochondrial DAMPs cause inflammatory responses to injury.
Qin Zhang, Mustafa Raoof, Yu Chen, Yuka Sumi, Tolga Sursal, Wolfgang Junger, Karim Brohi, Kiyoshi Itagaki, Carl J Hauser. Nature 2010
43

Autophagy proteins regulate innate immune responses by inhibiting the release of mitochondrial DNA mediated by the NALP3 inflammasome.
Kiichi Nakahira, Jeffrey Adam Haspel, Vijay A K Rathinam, Seon-Jin Lee, Tamas Dolinay, Hilaire C Lam, Joshua A Englert, Marlene Rabinovitch, Manuela Cernadas, Hong Pyo Kim,[...]. Nat Immunol 2011
24

Oxidized mitochondrial DNA activates the NLRP3 inflammasome during apoptosis.
Kenichi Shimada, Timothy R Crother, Justin Karlin, Jargalsaikhan Dagvadorj, Norika Chiba, Shuang Chen, V Krishnan Ramanujan, Andrea J Wolf, Laurent Vergnes, David M Ojcius,[...]. Immunity 2012
22

Mitochondrial DNA in innate immune responses and inflammatory pathology.
A Phillip West, Gerald S Shadel. Nat Rev Immunol 2017
334
22

Mitochondrial DNA stress primes the antiviral innate immune response.
A Phillip West, William Khoury-Hanold, Matthew Staron, Michal C Tal, Cristiana M Pineda, Sabine M Lang, Megan Bestwick, Brett A Duguay, Nuno Raimundo, Donna A MacDuff,[...]. Nature 2015
709
18

A role for mitochondria in NLRP3 inflammasome activation.
Rongbin Zhou, Amir S Yazdi, Philippe Menu, Jürg Tschopp. Nature 2011
16

Mitochondrial cardiolipin is required for Nlrp3 inflammasome activation.
Shankar S Iyer, Qiong He, John R Janczy, Eric I Elliott, Zhenyu Zhong, Alicia K Olivier, Jeffrey J Sadler, Vickie Knepper-Adrian, Renzhi Han, Liang Qiao,[...]. Immunity 2013
457
15

Elevated levels of plasma mitochondrial DNA DAMPs are linked to clinical outcome in severely injured human subjects.
Jon D Simmons, Yann-Leei Lee, Sujata Mulekar, Jamie L Kuck, Sidney B Brevard, Richard P Gonzalez, Mark N Gillespie, William O Richards. Ann Surg 2013
141
14


Circulating mitochondrial DNA in patients in the ICU as a marker of mortality: derivation and validation.
Kiichi Nakahira, Sun-Young Kyung, Angela J Rogers, Lee Gazourian, Sojung Youn, Anthony F Massaro, Carolina Quintana, Juan C Osorio, Zhaoxi Wang, Yang Zhao,[...]. PLoS Med 2013
253
13

Mitochondrial DNA that escapes from autophagy causes inflammation and heart failure.
Takafumi Oka, Shungo Hikoso, Osamu Yamaguchi, Manabu Taneike, Toshihiro Takeda, Takahito Tamai, Jota Oyabu, Tomokazu Murakawa, Hiroyuki Nakayama, Kazuhiko Nishida,[...]. Nature 2012
663
13

Mitochondrial DNA induces inflammation and increases TLR9/NF-κB expression in lung tissue.
Jian-Zheng Zhang, Zhi Liu, Jia Liu, Ji-Xin Ren, Tian-Sheng Sun. Int J Mol Med 2014
131
13

Emerging role of damage-associated molecular patterns derived from mitochondria in inflammation.
Dmitri V Krysko, Patrizia Agostinis, Olga Krysko, Abhishek D Garg, Claus Bachert, Bart N Lambrecht, Peter Vandenabeele. Trends Immunol 2011
413
12

Endogenously oxidized mitochondrial DNA induces in vivo and in vitro inflammatory responses.
L Vincent Collins, Shahin Hajizadeh, Elisabeth Holme, Ing-Marie Jonsson, Andrej Tarkowski. J Leukoc Biol 2004
277
12

Mitochondrial transfer from bone-marrow-derived stromal cells to pulmonary alveoli protects against acute lung injury.
Mohammad Naimul Islam, Shonit R Das, Memet T Emin, Michelle Wei, Li Sun, Kristin Westphalen, David J Rowlands, Sadiqa K Quadri, Sunita Bhattacharya, Jahar Bhattacharya. Nat Med 2012
748
11

Apoptotic caspases suppress mtDNA-induced STING-mediated type I IFN production.
Michael J White, Kate McArthur, Donald Metcalf, Rachael M Lane, John C Cambier, Marco J Herold, Mark F van Delft, Sammy Bedoui, Guillaume Lessene, Matthew E Ritchie,[...]. Cell 2014
421
10

Mitochondria in innate immune responses.
A Phillip West, Gerald S Shadel, Sankar Ghosh. Nat Rev Immunol 2011
722
10

Mitochondrial transfer between cells can rescue aerobic respiration.
Jeffrey L Spees, Scott D Olson, Mandolin J Whitney, Darwin J Prockop. Proc Natl Acad Sci U S A 2006
544
10

The Third International Consensus Definitions for Sepsis and Septic Shock (Sepsis-3).
Mervyn Singer, Clifford S Deutschman, Christopher Warren Seymour, Manu Shankar-Hari, Djillali Annane, Michael Bauer, Rinaldo Bellomo, Gordon R Bernard, Jean-Daniel Chiche, Craig M Coopersmith,[...]. JAMA 2016
9


Neutrophil extracellular traps enriched in oxidized mitochondrial DNA are interferogenic and contribute to lupus-like disease.
Christian Lood, Luz P Blanco, Monica M Purmalek, Carmelo Carmona-Rivera, Suk S De Ravin, Carolyne K Smith, Harry L Malech, Jeffrey A Ledbetter, Keith B Elkon, Mariana J Kaplan. Nat Med 2016
602
9

Apoptotic caspases prevent the induction of type I interferons by mitochondrial DNA.
Anthony Rongvaux, Ruaidhrí Jackson, Christian C D Harman, Tuo Li, A Phillip West, Marcel R de Zoete, Youtong Wu, Brian Yordy, Saquib A Lakhani, Chia-Yi Kuan,[...]. Cell 2014
383
9

Extracellular mitochondrial DNA and oxidatively damaged DNA in synovial fluid of patients with rheumatoid arthritis.
Shahin Hajizadeh, Jeroen DeGroot, Johan M TeKoppele, Andrej Tarkowski, L Vincent Collins. Arthritis Res Ther 2003
107
9

Tolerance, danger, and the extended family.
P Matzinger. Annu Rev Immunol 1994
8

Plasma nuclear and mitochondrial DNA levels as predictors of outcome in severe sepsis patients in the emergency room.
Chia-Te Kung, Sheng-Yuan Hsiao, Tsung-Cheng Tsai, Chih-Min Su, Wen-Neng Chang, Chi-Ren Huang, Hung-Chen Wang, Wei-Che Lin, Hsueh-Wen Chang, Yu-Jun Lin,[...]. J Transl Med 2012
84
9

Platelets release mitochondria serving as substrate for bactericidal group IIA-secreted phospholipase A2 to promote inflammation.
Luc H Boudreau, Anne-Claire Duchez, Nathalie Cloutier, Denis Soulet, Nicolas Martin, James Bollinger, Alexandre Paré, Matthieu Rousseau, Gajendra S Naika, Tania Lévesque,[...]. Blood 2014
291
8

Mitochondrial permeability transition triggers the release of mtDNA fragments.
M Patrushev, V Kasymov, V Patrusheva, T Ushakova, V Gogvadze, A Gaziev. Cell Mol Life Sci 2004
73
10

Mitochondria: master regulators of danger signalling.
Lorenzo Galluzzi, Oliver Kepp, Guido Kroemer. Nat Rev Mol Cell Biol 2012
442
8

Intravascular danger signals guide neutrophils to sites of sterile inflammation.
Braedon McDonald, Keir Pittman, Gustavo B Menezes, Simon A Hirota, Ingrid Slaba, Christopher C M Waterhouse, Paul L Beck, Daniel A Muruve, Paul Kubes. Science 2010
767
8

Mitochondrial damage-associated molecular patterns and vascular function.
Camilla Ferreira Wenceslau, Cameron G McCarthy, Theodora Szasz, Kathryn Spitler, Styliani Goulopoulou, R Clinton Webb. Eur Heart J 2014
70
11


Chemokines and mitochondrial products activate neutrophils to amplify organ injury during mouse acute liver failure.
Pedro E Marques, Sylvia S Amaral, Daniele A Pires, Laura L Nogueira, Frederico M Soriani, Braulio H F Lima, Gabriel A O Lopes, Remo C Russo, Thiago V Avila, Juliana G Melgaço,[...]. Hepatology 2012
201
7

Oxidized mitochondrial nucleoids released by neutrophils drive type I interferon production in human lupus.
Simone Caielli, Shruti Athale, Bojana Domic, Elise Murat, Manjari Chandra, Romain Banchereau, Jeanine Baisch, Kate Phelps, Sandra Clayton, Mei Gong,[...]. J Exp Med 2016
202
7

Hepatocyte mitochondrial DNA drives nonalcoholic steatohepatitis by activation of TLR9.
Irma Garcia-Martinez, Nicola Santoro, Yonglin Chen, Rafaz Hoque, Xinshou Ouyang, Sonia Caprio, Mark J Shlomchik, Robert Lee Coffman, Albert Candia, Wajahat Zafar Mehal. J Clin Invest 2016
227
7

Mitochondrial Damage-Associated Molecular Patterns (MTDs) Are Released during Hepatic Ischemia Reperfusion and Induce Inflammatory Responses.
Qianni Hu, Caroline Ruth Wood, Sanem Cimen, Ananda Baskaran Venkatachalam, Ian Patrick Joseph Alwayn. PLoS One 2015
37
18

Mitochondrial DAMPs increase endothelial permeability through neutrophil dependent and independent pathways.
Shiqin Sun, Tolga Sursal, Yasaman Adibnia, Cong Zhao, Yi Zheng, Haipeng Li, Leo E Otterbein, Carl J Hauser, Kiyoshi Itagaki. PLoS One 2013
130
7

Advances in the understanding of mitochondrial DNA as a pathogenic factor in inflammatory diseases.
Ray K Boyapati, Arina Tamborska, David A Dorward, Gwo-Tzer Ho. F1000Res 2017
82
8

Necrotic cells trigger a sterile inflammatory response through the Nlrp3 inflammasome.
Shankar S Iyer, Wilco P Pulskens, Jeffrey J Sadler, Loes M Butter, Gwendoline J Teske, Tyler K Ulland, Stephanie C Eisenbarth, Sandrine Florquin, Richard A Flavell, Jaklien C Leemans,[...]. Proc Natl Acad Sci U S A 2009
477
7

Succinate is an inflammatory signal that induces IL-1β through HIF-1α.
G M Tannahill, A M Curtis, J Adamik, E M Palsson-McDermott, A F McGettrick, G Goel, C Frezza, N J Bernard, B Kelly, N H Foley,[...]. Nature 2013
7

Protective mitochondrial transfer from bone marrow stromal cells to acute myeloid leukemic cells during chemotherapy.
Ruxanda Moschoi, Véronique Imbert, Marielle Nebout, Johanna Chiche, Didier Mary, Thomas Prebet, Estelle Saland, Rémy Castellano, Laurent Pouyet, Yves Collette,[...]. Blood 2016
179
7

Transplantation of autologously derived mitochondria protects the heart from ischemia-reperfusion injury.
Akihiro Masuzawa, Kendra M Black, Christina A Pacak, Maria Ericsson, Reanne J Barnett, Ciara Drumm, Pankaj Seth, Donald B Bloch, Sidney Levitsky, Douglas B Cowan,[...]. Am J Physiol Heart Circ Physiol 2013
141
7

Mitochondrial transcription factor A is a proinflammatory mediator in hemorrhagic shock.
Wayne W Chaung, Rongqian Wu, Youxin Ji, Weifeng Dong, Ping Wang. Int J Mol Med 2012
42
16

TLR signalling augments macrophage bactericidal activity through mitochondrial ROS.
A Phillip West, Igor E Brodsky, Christoph Rahner, Dong Kyun Woo, Hediye Erdjument-Bromage, Paul Tempst, Matthew C Walsh, Yongwon Choi, Gerald S Shadel, Sankar Ghosh. Nature 2011
879
7

Lymphocytes eject interferogenic mitochondrial DNA webs in response to CpG and non-CpG oligodeoxynucleotides of class C.
Björn Ingelsson, Daniel Söderberg, Tobias Strid, Anita Söderberg, Ann-Charlotte Bergh, Vesa Loitto, Kourosh Lotfi, Mårten Segelmark, Giannis Spyrou, Anders Rosén. Proc Natl Acad Sci U S A 2018
51
13

PAMPs and DAMPs: signal 0s that spur autophagy and immunity.
Daolin Tang, Rui Kang, Carolyn B Coyne, Herbert J Zeh, Michael T Lotze. Immunol Rev 2012
554
7

Mitochondria are the powerhouses of immunity.
Evanna L Mills, Beth Kelly, Luke A J O'Neill. Nat Immunol 2017
365
7

DAMPs from Cell Death to New Life.
Emilie Vénéreau, Chiara Ceriotti, Marco Emilio Bianchi. Front Immunol 2015
305
6


Mitochondrial DNA damage-associated molecular patterns mediate a feed-forward cycle of bacteria-induced vascular injury in perfused rat lungs.
Jamie L Kuck, Boniface O Obiako, Olena M Gorodnya, Viktor M Pastukh, Justin Kua, Jon D Simmons, Mark N Gillespie. Am J Physiol Lung Cell Mol Physiol 2015
46
13

The inflammasomes.
Kate Schroder, Jurg Tschopp. Cell 2010
6


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.