A citation-based method for searching scientific literature

Robert D Fagerlund, Anna Perederina, Igor Berezin, Andrey S Krasilnikov. RNA 2015
Times Cited: 12







List of co-cited articles
79 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Of proteins and RNA: the RNase P/MRP family.
Olga Esakova, Andrey S Krasilnikov. RNA 2010
147
58

Specific binding of a Pop6/Pop7 heterodimer to the P3 stem of the yeast RNase MRP and RNase P RNAs.
Anna Perederina, Olga Esakova, Hasan Koc, Mark E Schmitt, Andrey S Krasilnikov. RNA 2007
36
50

Active Yeast Telomerase Shares Subunits with Ribonucleoproteins RNase P and RNase MRP.
Bruno Lemieux, Nancy Laterreur, Anna Perederina, Jean-François Noël, Marie-Line Dubois, Andrey S Krasilnikov, Raymund J Wellinger. Cell 2016
46
50

Structural organizations of yeast RNase P and RNase MRP holoenzymes as revealed by UV-crosslinking studies of RNA-protein interactions.
Elena Khanova, Olga Esakova, Anna Perederina, Igor Berezin, Andrey S Krasilnikov. RNA 2012
18
41

Eukaryotic ribonucleases P/MRP: the crystal structure of the P3 domain.
Anna Perederina, Olga Esakova, Chao Quan, Elena Khanova, Andrey S Krasilnikov. EMBO J 2010
40
33

Modular architecture of eukaryotic RNase P and RNase MRP revealed by electron microscopy.
Katharina Hipp, Kyriaki Galani, Claire Batisse, Simone Prinz, Bettina Böttcher. Nucleic Acids Res 2012
20
33

Structure of a bacterial ribonuclease P holoenzyme in complex with tRNA.
Nicholas J Reiter, Amy Osterman, Alfredo Torres-Larios, Kerren K Swinger, Tao Pan, Alfonso Mondragón. Nature 2010
175
33

The POP1 gene encodes a protein component common to the RNase MRP and RNase P ribonucleoproteins.
Z Lygerou, P Mitchell, E Petfalski, B Séraphin, D Tollervey. Genes Dev 1994
191
33

Archaeal/eukaryal RNase P: subunits, functions and RNA diversification.
Nayef Jarrous, Venkat Gopalan. Nucleic Acids Res 2010
79
33


Heterodimerization of the human RNase P/MRP subunits Rpp20 and Rpp25 is a prerequisite for interaction with the P3 arm of RNase MRP RNA.
Katherine L D Hands-Taylor, Luigi Martino, Renée Tata, Jeffrey J Babon, Tam T Bui, Alex F Drake, Rebecca L Beavil, Ger J M Pruijn, Paul R Brown, Maria R Conte. Nucleic Acids Res 2010
28
33

Live cell imaging of telomerase RNA dynamics reveals cell cycle-dependent clustering of telomerase at elongating telomeres.
Franck Gallardo, Nancy Laterreur, Emilio Cusanelli, Faissal Ouenzar, Emmanuelle Querido, Raymund J Wellinger, Pascal Chartrand. Mol Cell 2011
90
25


A new telomerase RNA element that is critical for telomere elongation.
Nancy Laterreur, Sébastien H Eschbach, Daniel A Lafontaine, Raymund J Wellinger. Nucleic Acids Res 2013
11
27

The RNA moiety of ribonuclease P is the catalytic subunit of the enzyme.
C Guerrier-Takada, K Gardiner, T Marsh, N Pace, S Altman. Cell 1983
25


RNase P protein subunit Rpp29 represses histone H3.3 nucleosome deposition.
Alyshia Newhart, Sara Lawrence Powers, Prashanth Krishna Shastrula, Isabel Sierra, Lucy M Joo, James E Hayden, Andrew R Cohen, Susan M Janicki. Mol Biol Cell 2016
13
25

RNA binding properties of conserved protein subunits of human RNase P.
Robert Reiner, Noa Alfiya-Mor, Mishka Berrebi-Demma, Donna Wesolowski, Sidney Altman, Nayef Jarrous. Nucleic Acids Res 2011
13
25

Functional reconstitution and characterization of Pyrococcus furiosus RNase P.
Hsin-Yue Tsai, Dileep K Pulukkunat, Walter K Woznick, Venkat Gopalan. Proc Natl Acad Sci U S A 2006
67
25

A view of RNase P.
Sidney Altman. Mol Biosyst 2007
59
25

Unexpected diversity of RNase P, an ancient tRNA processing enzyme: challenges and prospects.
Lien B Lai, Agustín Vioque, Leif A Kirsebom, Venkat Gopalan. FEBS Lett 2010
92
25

Phylogenetic-comparative analysis of the eukaryal ribonuclease P RNA.
D N Frank, C Adamidi, M A Ehringer, C Pitulle, N R Pace. RNA 2000
79
25

A phylogenetically based secondary structure for the yeast telomerase RNA.
Alain T Dandjinou, Nancy Lévesque, Stéphanie Larose, Jean-François Lucier, Sherif Abou Elela, Raymund J Wellinger. Curr Biol 2004
102
16


Oligoribonucleotide synthesis using T7 RNA polymerase and synthetic DNA templates.
J F Milligan, D R Groebe, G W Witherell, O C Uhlenbeck. Nucleic Acids Res 1987
16

Identification and comparative analysis of telomerase RNAs from Candida species reveal conservation of functional elements.
Stanislava Gunisova, Elhanan Elboher, Jozef Nosek, Valentin Gorkovoy, Yogev Brown, Jean-Francois Lucier, Nancy Laterreur, Raymund J Wellinger, Yehuda Tzfati, Lubomir Tomaska. RNA 2009
75
16

Three Ever Shorter Telomere (EST) genes are dispensable for in vitro yeast telomerase activity.
J Lingner, T R Cech, T R Hughes, V Lundblad. Proc Natl Acad Sci U S A 1997
186
16

Saccharomyces cerevisiae telomerase is an Sm small nuclear ribonucleoprotein particle.
A G Seto, A J Zaug, S G Sobel, S L Wolin, T R Cech. Nature 1999
219
16

Origin of concatemeric T7 DNA.
J D Watson. Nat New Biol 1972
16



A bulged stem tethers Est1p to telomerase RNA in budding yeast.
Anita G Seto, April J Livengood, Yehuda Tzfati, Elizabeth H Blackburn, Thomas R Cech. Genes Dev 2002
108
16

RNA as a flexible scaffold for proteins: yeast telomerase and beyond.
D C Zappulla, T R Cech. Cold Spring Harb Symp Quant Biol 2006
64
16

Yeast telomerase RNA: a flexible scaffold for protein subunits.
David C Zappulla, Thomas R Cech. Proc Natl Acad Sci U S A 2004
167
16


An essential protein-binding domain of nuclear RNase P RNA.
W A Ziehler, J Morris, F H Scott, C Millikin, D R Engelke. RNA 2001
44
16

Proteomics of yeast telomerase identified Cdc48-Npl4-Ufd1 and Ufd4 as regulators of Est1 and telomere length.
Kah-Wai Lin, Karin R McDonald, Amanda J Guise, Angela Chan, Ileana M Cristea, Virginia A Zakian. Nat Commun 2015
17
16

Biogenesis of telomerase ribonucleoproteins.
Emily D Egan, Kathleen Collins. RNA 2012
115
16

RNase MRP cleaves the CLB2 mRNA to promote cell cycle progression: novel method of mRNA degradation.
Tina Gill, Ti Cai, Jason Aulds, Sara Wierzbicki, Mark E Schmitt. Mol Cell Biol 2004
115
16

Evolutionary comparison provides evidence for pathogenicity of RMRP mutations.
Luisa Bonafé, Emmanouil T Dermitzakis, Sheila Unger, Cheryl R Greenberg, Belinda A Campos-Xavier, Andreas Zankl, Catherine Ucla, Stylianos E Antonarakis, Andrea Superti-Furga, Alexandre Reymond. PLoS Genet 2005
48
16

DDX5 and its associated lncRNA Rmrp modulate TH17 cell effector functions.
Wendy Huang, Benjamin Thomas, Ryan A Flynn, Samuel J Gavzy, Lin Wu, Sangwon V Kim, Jason A Hall, Emily R Miraldi, Charles P Ng, Frank Rigo,[...]. Nature 2015
116
16


Mutations in the RNA component of RNase MRP cause a pleiotropic human disease, cartilage-hair hypoplasia.
M Ridanpää, H van Eenennaam, K Pelin, R Chadwick, C Johnson, B Yuan, W vanVenrooij, G Pruijn, R Salmela, S Rockas,[...]. Cell 2001
297
16

Mutual interactions between subunits of the human RNase MRP ribonucleoprotein complex.
Tim J M Welting, Walther J van Venrooij, Ger J M Pruijn. Nucleic Acids Res 2004
71
16

Both endonucleolytic and exonucleolytic cleavage mediate ITS1 removal during human ribosomal RNA processing.
Katherine E Sloan, Sandy Mattijssen, Simon Lebaron, David Tollervey, Ger J M Pruijn, Nicholas J Watkins. J Cell Biol 2013
86
16

Functional characterization of the conserved amino acids in Pop1p, the largest common protein subunit of yeast RNases P and MRP.
Shaohua Xiao, John Hsieh, Rebecca L Nugent, Daniel J Coughlin, Carol A Fierke, David R Engelke. RNA 2006
15
16

Of P and Z: mitochondrial tRNA processing enzymes.
Walter Rossmanith. Biochim Biophys Acta 2012
74
16

An RNA-dependent RNA polymerase formed by TERT and the RMRP RNA.
Yoshiko Maida, Mami Yasukawa, Miho Furuuchi, Timo Lassmann, Richard Possemato, Naoko Okamoto, Vivi Kasim, Yoshihide Hayashizaki, William C Hahn, Kenkichi Masutomi. Nature 2009
261
16


The RNA-binding proteomes from yeast to man harbour conserved enigmRBPs.
Benedikt M Beckmann, Rastislav Horos, Bernd Fischer, Alfredo Castello, Katrin Eichelbaum, Anne-Marie Alleaume, Thomas Schwarzl, Tomaž Curk, Sophia Foehr, Wolfgang Huber,[...]. Nat Commun 2015
230
16


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.