Mitchell J Machiela, Stephen J Chanock. Bioinformatics 2015
Times Cited: 768
Times Cited: 768
Times Cited
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A global reference for human genetic variation.
Adam Auton, Lisa D Brooks, Richard M Durbin, Erik P Garrison, Hyun Min Kang, Jan O Korbel, Jonathan L Marchini, Shane McCarthy, Gil A McVean, Gonçalo R Abecasis. Nature 2015
Adam Auton, Lisa D Brooks, Richard M Durbin, Erik P Garrison, Hyun Min Kang, Jan O Korbel, Jonathan L Marchini, Shane McCarthy, Gil A McVean, Gonçalo R Abecasis. Nature 2015
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PLINK: a tool set for whole-genome association and population-based linkage analyses.
Shaun Purcell, Benjamin Neale, Kathe Todd-Brown, Lori Thomas, Manuel A R Ferreira, David Bender, Julian Maller, Pamela Sklar, Paul I W de Bakker, Mark J Daly,[...]. Am J Hum Genet 2007
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The NHGRI-EBI GWAS Catalog of published genome-wide association studies, targeted arrays and summary statistics 2019.
Annalisa Buniello, Jacqueline A L MacArthur, Maria Cerezo, Laura W Harris, James Hayhurst, Cinzia Malangone, Aoife McMahon, Joannella Morales, Edward Mountjoy, Elliot Sollis,[...]. Nucleic Acids Res 2019
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Mendelian randomization with invalid instruments: effect estimation and bias detection through Egger regression.
Jack Bowden, George Davey Smith, Stephen Burgess. Int J Epidemiol 2015
Jack Bowden, George Davey Smith, Stephen Burgess. Int J Epidemiol 2015
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Next-generation genotype imputation service and methods.
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Consistent Estimation in Mendelian Randomization with Some Invalid Instruments Using a Weighted Median Estimator.
Jack Bowden, George Davey Smith, Philip C Haycock, Stephen Burgess. Genet Epidemiol 2016
Jack Bowden, George Davey Smith, Philip C Haycock, Stephen Burgess. Genet Epidemiol 2016
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Annotation of functional variation in personal genomes using RegulomeDB.
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Second-generation PLINK: rising to the challenge of larger and richer datasets.
Christopher C Chang, Carson C Chow, Laurent Cam Tellier, Shashaank Vattikuti, Shaun M Purcell, James J Lee. Gigascience 2015
Christopher C Chang, Carson C Chow, Laurent Cam Tellier, Shashaank Vattikuti, Shaun M Purcell, James J Lee. Gigascience 2015
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The MR-Base platform supports systematic causal inference across the human phenome.
Gibran Hemani, Jie Zheng, Benjamin Elsworth, Kaitlin H Wade, Valeriia Haberland, Denis Baird, Charles Laurin, Stephen Burgess, Jack Bowden, Ryan Langdon,[...]. Elife 2018
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Detection of widespread horizontal pleiotropy in causal relationships inferred from Mendelian randomization between complex traits and diseases.
Marie Verbanck, Chia-Yen Chen, Benjamin Neale, Ron Do. Nat Genet 2018
Marie Verbanck, Chia-Yen Chen, Benjamin Neale, Ron Do. Nat Genet 2018
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LD Score regression distinguishes confounding from polygenicity in genome-wide association studies.
Brendan K Bulik-Sullivan, Po-Ru Loh, Hilary K Finucane, Stephan Ripke, Jian Yang, Nick Patterson, Mark J Daly, Alkes L Price, Benjamin M Neale. Nat Genet 2015
Brendan K Bulik-Sullivan, Po-Ru Loh, Hilary K Finucane, Stephan Ripke, Jian Yang, Nick Patterson, Mark J Daly, Alkes L Price, Benjamin M Neale. Nat Genet 2015
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LocusZoom: regional visualization of genome-wide association scan results.
Randall J Pruim, Ryan P Welch, Serena Sanna, Tanya M Teslovich, Peter S Chines, Terry P Gliedt, Michael Boehnke, Gonçalo R Abecasis, Cristen J Willer. Bioinformatics 2010
Randall J Pruim, Ryan P Welch, Serena Sanna, Tanya M Teslovich, Peter S Chines, Terry P Gliedt, Michael Boehnke, Gonçalo R Abecasis, Cristen J Willer. Bioinformatics 2010
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The mutational constraint spectrum quantified from variation in 141,456 humans.
Konrad J Karczewski, Laurent C Francioli, Grace Tiao, Beryl B Cummings, Jessica Alföldi, Qingbo Wang, Ryan L Collins, Kristen M Laricchia, Andrea Ganna, Daniel P Birnbaum,[...]. Nature 2020
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Genetic effects on gene expression across human tissues.
Alexis Battle, Christopher D Brown, Barbara E Engelhardt, Stephen B Montgomery. Nature 2017
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dbSNP: the NCBI database of genetic variation.
S T Sherry, M H Ward, M Kholodov, J Baker, L Phan, E M Smigielski, K Sirotkin. Nucleic Acids Res 2001
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The human genome browser at UCSC.
W James Kent, Charles W Sugnet, Terrence S Furey, Krishna M Roskin, Tom H Pringle, Alan M Zahler, David Haussler. Genome Res 2002
W James Kent, Charles W Sugnet, Terrence S Furey, Krishna M Roskin, Tom H Pringle, Alan M Zahler, David Haussler. Genome Res 2002
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A reference panel of 64,976 haplotypes for genotype imputation.
Shane McCarthy, Sayantan Das, Warren Kretzschmar, Olivier Delaneau, Andrew R Wood, Alexander Teumer, Hyun Min Kang, Christian Fuchsberger, Petr Danecek, Kevin Sharp,[...]. Nat Genet 2016
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Mendelian randomization: using genes as instruments for making causal inferences in epidemiology.
Debbie A Lawlor, Roger M Harbord, Jonathan A C Sterne, Nic Timpson, George Davey Smith. Stat Med 2008
Debbie A Lawlor, Roger M Harbord, Jonathan A C Sterne, Nic Timpson, George Davey Smith. Stat Med 2008
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HaploReg v4: systematic mining of putative causal variants, cell types, regulators and target genes for human complex traits and disease.
Lucas D Ward, Manolis Kellis. Nucleic Acids Res 2016
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The UK Biobank resource with deep phenotyping and genomic data.
Clare Bycroft, Colin Freeman, Desislava Petkova, Gavin Band, Lloyd T Elliott, Kevin Sharp, Allan Motyer, Damjan Vukcevic, Olivier Delaneau, Jared O'Connell,[...]. Nature 2018
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MendelianRandomization: an R package for performing Mendelian randomization analyses using summarized data.
Olena O Yavorska, Stephen Burgess. Int J Epidemiol 2017
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The new NHGRI-EBI Catalog of published genome-wide association studies (GWAS Catalog).
Jacqueline MacArthur, Emily Bowler, Maria Cerezo, Laurent Gil, Peggy Hall, Emma Hastings, Heather Junkins, Aoife McMahon, Annalisa Milano, Joannella Morales,[...]. Nucleic Acids Res 2017
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UK biobank: an open access resource for identifying the causes of a wide range of complex diseases of middle and old age.
Cathie Sudlow, John Gallacher, Naomi Allen, Valerie Beral, Paul Burton, John Danesh, Paul Downey, Paul Elliott, Jane Green, Martin Landray,[...]. PLoS Med 2015
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Human genomics. The Genotype-Tissue Expression (GTEx) pilot analysis: multitissue gene regulation in humans.
. Science 2015
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An atlas of genetic correlations across human diseases and traits.
Brendan Bulik-Sullivan, Hilary K Finucane, Verneri Anttila, Alexander Gusev, Felix R Day, Po-Ru Loh, Laramie Duncan, John R B Perry, Nick Patterson, Elise B Robinson,[...]. Nat Genet 2015
Brendan Bulik-Sullivan, Hilary K Finucane, Verneri Anttila, Alexander Gusev, Felix R Day, Po-Ru Loh, Laramie Duncan, John R B Perry, Nick Patterson, Elise B Robinson,[...]. Nat Genet 2015
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PhenoScanner V2: an expanded tool for searching human genotype-phenotype associations.
Mihir A Kamat, James A Blackshaw, Robin Young, Praveen Surendran, Stephen Burgess, John Danesh, Adam S Butterworth, James R Staley. Bioinformatics 2019
Mihir A Kamat, James A Blackshaw, Robin Young, Praveen Surendran, Stephen Burgess, John Danesh, Adam S Butterworth, James R Staley. Bioinformatics 2019
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Genetic studies of body mass index yield new insights for obesity biology.
Adam E Locke, Bratati Kahali, Sonja I Berndt, Anne E Justice, Tune H Pers, Felix R Day, Corey Powell, Sailaja Vedantam, Martin L Buchkovich, Jian Yang,[...]. Nature 2015
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'Mendelian randomization': can genetic epidemiology contribute to understanding environmental determinants of disease?
George Davey Smith, Shah Ebrahim. Int J Epidemiol 2003
George Davey Smith, Shah Ebrahim. Int J Epidemiol 2003
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HaploReg: a resource for exploring chromatin states, conservation, and regulatory motif alterations within sets of genetically linked variants.
Lucas D Ward, Manolis Kellis. Nucleic Acids Res 2012
Lucas D Ward, Manolis Kellis. Nucleic Acids Res 2012
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Mendelian randomization analysis with multiple genetic variants using summarized data.
Stephen Burgess, Adam Butterworth, Simon G Thompson. Genet Epidemiol 2013
Stephen Burgess, Adam Butterworth, Simon G Thompson. Genet Epidemiol 2013
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Principal components analysis corrects for stratification in genome-wide association studies.
Alkes L Price, Nick J Patterson, Robert M Plenge, Michael E Weinblatt, Nancy A Shadick, David Reich. Nat Genet 2006
Alkes L Price, Nick J Patterson, Robert M Plenge, Michael E Weinblatt, Nancy A Shadick, David Reich. Nat Genet 2006
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Genomic atlas of the human plasma proteome.
Benjamin B Sun, Joseph C Maranville, James E Peters, David Stacey, James R Staley, James Blackshaw, Stephen Burgess, Tao Jiang, Ellie Paige, Praveen Surendran,[...]. Nature 2018
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LDlinkR: An R Package for Rapidly Calculating Linkage Disequilibrium Statistics in Diverse Populations.
Timothy A Myers, Stephen J Chanock, Mitchell J Machiela. Front Genet 2020
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Genome-wide meta-analysis identifies new loci and functional pathways influencing Alzheimer's disease risk.
Iris E Jansen, Jeanne E Savage, Kyoko Watanabe, Julien Bryois, Dylan M Williams, Stacy Steinberg, Julia Sealock, Ida K Karlsson, Sara Hägg, Lavinia Athanasiu,[...]. Nat Genet 2019
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METAL: fast and efficient meta-analysis of genomewide association scans.
Cristen J Willer, Yun Li, Gonçalo R Abecasis. Bioinformatics 2010
Cristen J Willer, Yun Li, Gonçalo R Abecasis. Bioinformatics 2010
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Functional mapping and annotation of genetic associations with FUMA.
Kyoko Watanabe, Erdogan Taskesen, Arjen van Bochoven, Danielle Posthuma. Nat Commun 2017
Kyoko Watanabe, Erdogan Taskesen, Arjen van Bochoven, Danielle Posthuma. Nat Commun 2017
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Haploview: analysis and visualization of LD and haplotype maps.
J C Barrett, B Fry, J Maller, M J Daly. Bioinformatics 2005
J C Barrett, B Fry, J Maller, M J Daly. Bioinformatics 2005
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Systematic identification of trans eQTLs as putative drivers of known disease associations.
Harm-Jan Westra, Marjolein J Peters, Tõnu Esko, Hanieh Yaghootkar, Claudia Schurmann, Johannes Kettunen, Mark W Christiansen, Benjamin P Fairfax, Katharina Schramm, Joseph E Powell,[...]. Nat Genet 2013
Harm-Jan Westra, Marjolein J Peters, Tõnu Esko, Hanieh Yaghootkar, Claudia Schurmann, Johannes Kettunen, Mark W Christiansen, Benjamin P Fairfax, Katharina Schramm, Joseph E Powell,[...]. Nat Genet 2013
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The Post-GWAS Era: From Association to Function.
Michael D Gallagher, Alice S Chen-Plotkin. Am J Hum Genet 2018
Michael D Gallagher, Alice S Chen-Plotkin. Am J Hum Genet 2018
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Assessing the suitability of summary data for two-sample Mendelian randomization analyses using MR-Egger regression: the role of the I2 statistic.
Jack Bowden, Fabiola Del Greco M, Cosetta Minelli, George Davey Smith, Nuala A Sheehan, John R Thompson. Int J Epidemiol 2016
Jack Bowden, Fabiola Del Greco M, Cosetta Minelli, George Davey Smith, Nuala A Sheehan, John R Thompson. Int J Epidemiol 2016
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Bias due to participant overlap in two-sample Mendelian randomization.
Stephen Burgess, Neil M Davies, Simon G Thompson. Genet Epidemiol 2016
Stephen Burgess, Neil M Davies, Simon G Thompson. Genet Epidemiol 2016
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Robust inference in summary data Mendelian randomization via the zero modal pleiotropy assumption.
Fernando Pires Hartwig, George Davey Smith, Jack Bowden. Int J Epidemiol 2017
Fernando Pires Hartwig, George Davey Smith, Jack Bowden. Int J Epidemiol 2017
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Integrative analysis of 111 reference human epigenomes.
Anshul Kundaje, Wouter Meuleman, Jason Ernst, Misha Bilenky, Angela Yen, Alireza Heravi-Moussavi, Pouya Kheradpour, Zhizhuo Zhang, Jianrong Wang, Michael J Ziller,[...]. Nature 2015
Anshul Kundaje, Wouter Meuleman, Jason Ernst, Misha Bilenky, Angela Yen, Alireza Heravi-Moussavi, Pouya Kheradpour, Zhizhuo Zhang, Jianrong Wang, Michael J Ziller,[...]. Nature 2015
4
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Bayesian test for colocalisation between pairs of genetic association studies using summary statistics.
Claudia Giambartolomei, Damjan Vukcevic, Eric E Schadt, Lude Franke, Aroon D Hingorani, Chris Wallace, Vincent Plagnol. PLoS Genet 2014
Claudia Giambartolomei, Damjan Vukcevic, Eric E Schadt, Lude Franke, Aroon D Hingorani, Chris Wallace, Vincent Plagnol. PLoS Genet 2014
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Mendelian randomization with a binary exposure variable: interpretation and presentation of causal estimates.
Stephen Burgess, Jeremy A Labrecque. Eur J Epidemiol 2018
Stephen Burgess, Jeremy A Labrecque. Eur J Epidemiol 2018
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Interpreting findings from Mendelian randomization using the MR-Egger method.
Stephen Burgess, Simon G Thompson. Eur J Epidemiol 2017
Stephen Burgess, Simon G Thompson. Eur J Epidemiol 2017
4
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