A citation-based method for searching scientific literature

Meng-Chang Hsiao, Arkadiusz Piotrowski, Tom Callens, Chuanhua Fu, Katharina Wimmer, Kathleen B M Claes, Ludwine Messiaen. Am J Hum Genet 2015
Times Cited: 15







List of co-cited articles
62 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity



The role of microhomology in genomic structural variation.
Diego Ottaviani, Magdalena LeCain, Denise Sheer. Trends Genet 2014
100
40

The DNA replication FoSTeS/MMBIR mechanism can generate genomic, genic and exonic complex rearrangements in humans.
Feng Zhang, Mehrdad Khajavi, Anne M Connolly, Charles F Towne, Sat Dev Batish, James R Lupski. Nat Genet 2009
306
33

The Alu-rich genomic architecture of SPAST predisposes to diverse and functionally distinct disease-associated CNV alleles.
Philip M Boone, Bo Yuan, Ian M Campbell, Jennifer C Scull, Marjorie A Withers, Brett C Baggett, Christine R Beck, Christine J Shaw, Pawel Stankiewicz, Paolo Moretti,[...]. Am J Hum Genet 2014
61
33


Mechanisms underlying structural variant formation in genomic disorders.
Claudia M B Carvalho, James R Lupski. Nat Rev Genet 2016
292
33

Copy number variation in human health, disease, and evolution.
Feng Zhang, Wenli Gu, Matthew E Hurles, James R Lupski. Annu Rev Genomics Hum Genet 2009
714
26

Mechanisms of change in gene copy number.
P J Hastings, James R Lupski, Susan M Rosenberg, Grzegorz Ira. Nat Rev Genet 2009
745
26

Complex genomic rearrangements at the PLP1 locus include triplication and quadruplication.
Christine R Beck, Claudia M B Carvalho, Linda Banser, Tomasz Gambin, Danielle Stubbolo, Bo Yuan, Karen Sperle, Suzanne M McCahan, Marco Henneke, Pavel Seeman,[...]. PLoS Genet 2015
42
26

Replicative mechanisms for CNV formation are error prone.
Claudia M B Carvalho, Davut Pehlivan, Melissa B Ramocki, Ping Fang, Benjamin Alleva, Luis M Franco, John W Belmont, P J Hastings, James R Lupski. Nat Genet 2013
91
26

Mechanisms for nonrecurrent genomic rearrangements associated with CMT1A or HNPP: rare CNVs as a cause for missing heritability.
Feng Zhang, Pavel Seeman, Pengfei Liu, Marian A J Weterman, Claudia Gonzaga-Jauregui, Charles F Towne, Sat Dev Batish, Els De Vriendt, Peter De Jonghe, Bernd Rautenstrauss,[...]. Am J Hum Genet 2010
92
20

DNA REPAIR. Mus81 and converging forks limit the mutagenicity of replication fork breakage.
Ryan Mayle, Ian M Campbell, Christine R Beck, Yang Yu, Marenda Wilson, Chad A Shaw, Lotte Bjergbaek, James R Lupski, Grzegorz Ira. Science 2015
128
20

Complex rearrangements in patients with duplications of MECP2 can occur by fork stalling and template switching.
Claudia M B Carvalho, Feng Zhang, Pengfei Liu, Ankita Patel, Trilochan Sahoo, Carlos A Bacino, Chad Shaw, Sandra Peacock, Amber Pursley, Y Jane Tavyev,[...]. Hum Mol Genet 2009
143
20

Alu-mediated diverse and complex pathogenic copy-number variants within human chromosome 17 at p13.3.
Shen Gu, Bo Yuan, Ian M Campbell, Christine R Beck, Claudia M B Carvalho, Sandesh C S Nagamani, Ayelet Erez, Ankita Patel, Carlos A Bacino, Chad A Shaw,[...]. Hum Mol Genet 2015
57
20

Inverted genomic segments and complex triplication rearrangements are mediated by inverted repeats in the human genome.
Claudia M B Carvalho, Melissa B Ramocki, Davut Pehlivan, Luis M Franco, Claudia Gonzaga-Jauregui, Ping Fang, Alanna McCall, Eniko Karman Pivnick, Stacy Hines-Dowell, Laurie H Seaver,[...]. Nat Genet 2011
130
20

Genomic rearrangements resulting in PLP1 deletion occur by nonhomologous end joining and cause different dysmyelinating phenotypes in males and females.
Ken Inoue, Hitoshi Osaka, Virginia C Thurston, Joe T R Clarke, Akira Yoneyama, Lisa Rosenbarker, Thomas D Bird, M E Hodes, Lisa G Shaffer, James R Lupski. Am J Hum Genet 2002
121
20

Somatic mosaicism: implications for disease and transmission genetics.
Ian M Campbell, Chad A Shaw, Pawel Stankiewicz, James R Lupski. Trends Genet 2015
155
13


Identification of uncommon recurrent Potocki-Lupski syndrome-associated duplications and the distribution of rearrangement types and mechanisms in PTLS.
Feng Zhang, Lorraine Potocki, Jacinda B Sampson, Pengfei Liu, Amarilis Sanchez-Valle, Patricia Robbins-Furman, Alicia Delicado Navarro, Patricia G Wheeler, J Edward Spence, Campbell K Brasington,[...]. Am J Hum Genet 2010
67
13

Expansions, contractions, and fragility of the spinocerebellar ataxia type 10 pentanucleotide repeat in yeast.
Nicole Cherng, Alexander A Shishkin, Lucas I Schlager, Ryan H Tuck, Laura Sloan, Robert Matera, Partha S Sarkar, Tetsuo Ashizawa, Catherine H Freudenreich, Sergei M Mirkin. Proc Natl Acad Sci U S A 2011
37
13

Break-induced replication is a source of mutation clusters underlying kataegis.
Cynthia J Sakofsky, Steven A Roberts, Ewa Malc, Piotr A Mieczkowski, Michael A Resnick, Dmitry A Gordenin, Anna Malkova. Cell Rep 2014
107
13

Recent segmental duplications in the human genome.
Jeffrey A Bailey, Zhiping Gu, Royden A Clark, Knut Reinert, Rhea V Samonte, Stuart Schwartz, Mark D Adams, Eugene W Myers, Peter W Li, Evan E Eichler. Science 2002
945
13

Translesion Polymerases Drive Microhomology-Mediated Break-Induced Replication Leading to Complex Chromosomal Rearrangements.
Cynthia J Sakofsky, Sandeep Ayyar, Angela K Deem, Woo-Hyun Chung, Grzegorz Ira, Anna Malkova. Mol Cell 2015
71
13

Copy number gain at Xp22.31 includes complex duplication rearrangements and recurrent triplications.
Pengfei Liu, Ayelet Erez, Sandesh C Sreenath Nagamani, Weimin Bi, Claudia M B Carvalho, Alexandra D Simmons, Joanna Wiszniewska, Ping Fang, Patricia A Eng, M Lance Cooper,[...]. Hum Mol Genet 2011
56
13

Complex human chromosomal and genomic rearrangements.
Feng Zhang, Claudia M B Carvalho, James R Lupski. Trends Genet 2009
187
13

Initial sequencing and analysis of the human genome.
E S Lander, L M Linton, B Birren, C Nusbaum, M C Zody, J Baldwin, K Devon, K Dewar, M Doyle, W FitzHugh,[...]. Nature 2001
13

A human genome structural variation sequencing resource reveals insights into mutational mechanisms.
Jeffrey M Kidd, Tina Graves, Tera L Newman, Robert Fulton, Hillary S Hayden, Maika Malig, Joelle Kallicki, Rajinder Kaul, Richard K Wilson, Evan E Eichler. Cell 2010
192
13

Migrating bubble during break-induced replication drives conservative DNA synthesis.
Natalie Saini, Sreejith Ramakrishnan, Rajula Elango, Sandeep Ayyar, Yu Zhang, Angela Deem, Grzegorz Ira, James E Haber, Kirill S Lobachev, Anna Malkova. Nature 2013
220
13

DNA polymerases ζ and Rev1 mediate error-prone bypass of non-B DNA structures.
Matthew R Northam, Elizabeth A Moore, Tony M Mertz, Sara K Binz, Carrie M Stith, Elena I Stepchenkova, Kathern L Wendt, Peter M J Burgers, Polina V Shcherbakova. Nucleic Acids Res 2014
63
13

Break-induced replication occurs by conservative DNA synthesis.
Roberto A Donnianni, Lorraine S Symington. Proc Natl Acad Sci U S A 2013
120
13

Heterogeneous duplications in patients with Pelizaeus-Merzbacher disease suggest a mechanism of coupled homologous and nonhomologous recombination.
Karen J Woodward, Maria Cundall, Karen Sperle, Erik A Sistermans, Mark Ross, Gareth Howell, Susan M Gribble, Deborah C Burford, Nigel P Carter, Donald L Hobson,[...]. Am J Hum Genet 2005
82
13

Analysis of deletion breakpoints from 1,092 humans reveals details of mutation mechanisms.
Alexej Abyzov, Shantao Li, Daniel Rhee Kim, Marghoob Mohiyuddin, Adrian M Stütz, Nicholas F Parrish, Xinmeng Jasmine Mu, Wyatt Clark, Ken Chen, Matthew Hurles,[...]. Nat Commun 2015
58
13

Rare pathogenic microdeletions and tandem duplications are microhomology-mediated and stimulated by local genomic architecture.
Lisenka E L M Vissers, Samarth S Bhatt, Irene M Janssen, Zhilian Xia, Seema R Lalani, Rolph Pfundt, Katarzyna Derwinska, Bert B A de Vries, Christian Gilissen, Alexander Hoischen,[...]. Hum Mol Genet 2009
122
13

Absence of heterozygosity due to template switching during replicative rearrangements.
Claudia M B Carvalho, Rolph Pfundt, Daniel A King, Sarah J Lindsay, Luciana W Zuccherato, Merryn V E Macville, Pengfei Liu, Diana Johnson, Pawel Stankiewicz, Chester W Brown,[...]. Am J Hum Genet 2015
37
13

Mutation spectrum revealed by breakpoint sequencing of human germline CNVs.
Donald F Conrad, Christine Bird, Ben Blackburne, Sarah Lindsay, Lira Mamanova, Charles Lee, Daniel J Turner, Matthew E Hurles. Nat Genet 2010
175
13

Inverted low-copy repeats and genome instability--a genome-wide analysis.
Piotr Dittwald, Tomasz Gambin, Claudia Gonzaga-Jauregui, Claudia M B Carvalho, James R Lupski, Paweł Stankiewicz, Anna Gambin. Hum Mutat 2013
39
13

Chromosome rearrangements via template switching between diverged repeated sequences.
Ranjith P Anand, Olga Tsaponina, Patricia W Greenwell, Cheng-Sheng Lee, Wei Du, Thomas D Petes, James E Haber. Genes Dev 2014
71
13

Meta-analysis of gross insertions causing human genetic disease: novel mutational mechanisms and the role of replication slippage.
Jian-Min Chen, Nadia Chuzhanova, Peter D Stenson, Claude Férec, David N Cooper. Hum Mutat 2005
114
13


Mechanisms for recurrent and complex human genomic rearrangements.
Pengfei Liu, Claudia M B Carvalho, P J Hastings, James R Lupski. Curr Opin Genet Dev 2012
219
13

On the mechanism of gene amplification induced under stress in Escherichia coli.
Andrew Slack, P C Thornton, Daniel B Magner, Susan M Rosenberg, P J Hastings. PLoS Genet 2006
125
13

Break-induced replication repair of damaged forks induces genomic duplications in human cells.
Lorenzo Costantino, Sotirios K Sotiriou, Juha K Rantala, Simon Magin, Emil Mladenov, Thomas Helleday, James E Haber, George Iliakis, Olli P Kallioniemi, Thanos D Halazonetis. Science 2014
284
13

Characterization of two unusual truncating PMM2 mutations in two CDG-Ia patients.
Els Schollen, Liesbeth Keldermans, François Foulquier, Paz Briones, Amparo Chabas, Félix Sánchez-Valverde, Maciej Adamowicz, Ewa Pronicka, Ron Wevers, Gert Matthijs. Mol Genet Metab 2007
33
13

High frequency of partial SPAST deletions in autosomal dominant hereditary spastic paraplegia.
C Beetz, A O H Nygren, J Schickel, M Auer-Grumbach, K Bürk, G Heide, J Kassubek, S Klimpe, T Klopstock, F Kreuz,[...]. Neurology 2006
107
13

A novel complex deletion-insertion mutation mediated by Alu repetitive elements leads to lipoprotein lipase deficiency.
Minoru Okubo, Asako Horinishi, Mieko Saito, Tetsu Ebara, Yoriko Endo, Kohei Kaku, Toshio Murase, Masaaki Eto. Mol Genet Metab 2007
29
13

A comprehensive map of mobile element insertion polymorphisms in humans.
Chip Stewart, Deniz Kural, Michael P Strömberg, Jerilyn A Walker, Miriam K Konkel, Adrian M Stütz, Alexander E Urban, Fabian Grubert, Hugo Y K Lam, Wan-Ping Lee,[...]. PLoS Genet 2011
203
13

MFN2 deletion of exons 7 and 8: founder mutation in the UK population.
Aisling S Carr, James M Polke, Jacob Wilson, Ana L Pelayo-Negro, Matilde Laura, Tina Nanji, James Holt, Jennifer Vaughan, Julia Rankin, Mary G Sweeney,[...]. J Peripher Nerv Syst 2015
12
16

Motor chip: a comparative genomic hybridization microarray for copy-number mutations in 245 neuromuscular disorders.
Giulio Piluso, Manuela Dionisi, Francesca Del Vecchio Blanco, Annalaura Torella, Stefania Aurino, Marco Savarese, Teresa Giugliano, Enrico Bertini, Alessandra Terracciano, Mariz Vainzof,[...]. Clin Chem 2011
34
13

Structural variation in the human genome and its role in disease.
Paweł Stankiewicz, James R Lupski. Annu Rev Med 2010
690
13

Breakpoint mapping of 13 large parkin deletions/duplications reveals an exon 4 deletion and an exon 7 duplication as founder mutations.
Peter Elfferich, Marja C Verleun-Mooijman, J Anneke Maat-Kievit, Bart P C van de Warrenburg, Wilson F Abdo, Sylvia A Eshuis, Klaus L Leenders, Ad Hovestadt, Jan C M Zijlmans, Jan-Pieter M Stroy,[...]. Neurogenetics 2011
10
20


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.