A citation-based method for searching scientific literature

Vicki S Chambers, Giovanni Marsico, Jonathan M Boutell, Marco Di Antonio, Geoffrey P Smith, Shankar Balasubramanian. Nat Biotechnol 2015
Times Cited: 625







List of co-cited articles
1256 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


G-quadruplex structures mark human regulatory chromatin.
Robert Hänsel-Hertsch, Dario Beraldi, Stefanie V Lensing, Giovanni Marsico, Katherine Zyner, Aled Parry, Marco Di Antonio, Jeremy Pike, Hiroshi Kimura, Masashi Narita,[...]. Nat Genet 2016
419
40

The regulation and functions of DNA and RNA G-quadruplexes.
Dhaval Varshney, Jochen Spiegel, Katherine Zyner, David Tannahill, Shankar Balasubramanian. Nat Rev Mol Cell Biol 2020
308
34

Quantitative visualization of DNA G-quadruplex structures in human cells.
Giulia Biffi, David Tannahill, John McCafferty, Shankar Balasubramanian. Nat Chem 2013
34

Direct evidence for a G-quadruplex in a promoter region and its targeting with a small molecule to repress c-MYC transcription.
Adam Siddiqui-Jain, Cory L Grand, David J Bearss, Laurence H Hurley. Proc Natl Acad Sci U S A 2002
31

Prevalence of quadruplexes in the human genome.
Julian L Huppert, Shankar Balasubramanian. Nucleic Acids Res 2005
29

Quadruplex DNA: sequence, topology and structure.
Sarah Burge, Gary N Parkinson, Pascale Hazel, Alan K Todd, Stephen Neidle. Nucleic Acids Res 2006
29

G-quadruplexes and their regulatory roles in biology.
Daniela Rhodes, Hans J Lipps. Nucleic Acids Res 2015
811
28

Whole genome experimental maps of DNA G-quadruplexes in multiple species.
Giovanni Marsico, Vicki S Chambers, Aleksandr B Sahakyan, Patrick McCauley, Jonathan M Boutell, Marco Di Antonio, Shankar Balasubramanian. Nucleic Acids Res 2019
150
26

Targeting G-quadruplexes in gene promoters: a novel anticancer strategy?
Shankar Balasubramanian, Laurence H Hurley, Stephen Neidle. Nat Rev Drug Discov 2011
25

Re-evaluation of G-quadruplex propensity with G4Hunter.
Amina Bedrat, Laurent Lacroix, Jean-Louis Mergny. Nucleic Acids Res 2016
313
23

The Structure and Function of DNA G-Quadruplexes.
Jochen Spiegel, Santosh Adhikari, Shankar Balasubramanian. Trends Chem 2020
246
23

DNA secondary structures: stability and function of G-quadruplex structures.
Matthew L Bochman, Katrin Paeschke, Virginia A Zakian. Nat Rev Genet 2012
825
21

Genome-wide mapping of endogenous G-quadruplex DNA structures by chromatin immunoprecipitation and high-throughput sequencing.
Robert Hänsel-Hertsch, Jochen Spiegel, Giovanni Marsico, David Tannahill, Shankar Balasubramanian. Nat Protoc 2018
106
20

rG4-seq reveals widespread formation of G-quadruplex structures in the human transcriptome.
Chun Kit Kwok, Giovanni Marsico, Aleksandr B Sahakyan, Vicki S Chambers, Shankar Balasubramanian. Nat Methods 2016
205
20

G-quadruplexes in promoters throughout the human genome.
Julian L Huppert, Shankar Balasubramanian. Nucleic Acids Res 2007
873
20

Highly prevalent putative quadruplex sequence motifs in human DNA.
Alan K Todd, Matthew Johnston, Stephen Neidle. Nucleic Acids Res 2005
703
17

Single-molecule visualization of DNA G-quadruplex formation in live cells.
Marco Di Antonio, Aleks Ponjavic, Antanas Radzevičius, Rohan T Ranasinghe, Marco Catalano, Xiaoyun Zhang, Jiazhen Shen, Lisa-Maria Needham, Steven F Lee, David Klenerman,[...]. Nat Chem 2020
108
17

Helix formation by guanylic acid.
M GELLERT, M N LIPSETT, D R DAVIES. Proc Natl Acad Sci U S A 1962
17

DNA G-quadruplexes in the human genome: detection, functions and therapeutic potential.
Robert Hänsel-Hertsch, Marco Di Antonio, Shankar Balasubramanian. Nat Rev Mol Cell Biol 2017
442
16

DNA G-quadruplex structures mold the DNA methylome.
Shi-Qing Mao, Avazeh T Ghanbarian, Jochen Spiegel, Sergio Martínez Cuesta, Dario Beraldi, Marco Di Antonio, Giovanni Marsico, Robert Hänsel-Hertsch, David Tannahill, Shankar Balasubramanian. Nat Struct Mol Biol 2018
105
16


Small-molecule interaction with a five-guanine-tract G-quadruplex structure from the human MYC promoter.
Anh Tuân Phan, Vitaly Kuryavyi, Hai Yan Gaw, Dinshaw J Patel. Nat Chem Biol 2005
368
16

5'-UTR RNA G-quadruplexes: translation regulation and targeting.
Anthony Bugaut, Shankar Balasubramanian. Nucleic Acids Res 2012
420
13


Recent Progress of Targeted G-Quadruplex-Preferred Ligands Toward Cancer Therapy.
Sefan Asamitsu, Shunsuke Obata, Zutao Yu, Toshikazu Bando, Hiroshi Sugiyama. Molecules 2019
147
13

G-Quadruplexes: Prediction, Characterization, and Biological Application.
Chun Kit Kwok, Catherine J Merrick. Trends Biotechnol 2017
185
13

A novel small molecule that alters shelterin integrity and triggers a DNA-damage response at telomeres.
Raphaël Rodriguez, Sebastian Müller, Justin A Yeoman, Chantal Trentesaux, Jean-François Riou, Shankar Balasubramanian. J Am Chem Soc 2008
276
13


I-motif DNA structures are formed in the nuclei of human cells.
Mahdi Zeraati, David B Langley, Peter Schofield, Aaron L Moye, Romain Rouet, William E Hughes, Tracy M Bryan, Marcel E Dinger, Daniel Christ. Nat Chem 2018
250
13

Small-molecule-induced DNA damage identifies alternative DNA structures in human genes.
Raphaël Rodriguez, Kyle M Miller, Josep V Forment, Charles R Bradshaw, Mehran Nikan, Sébastien Britton, Tobias Oelschlaegel, Blerta Xhemalce, Shankar Balasubramanian, Stephen P Jackson. Nat Chem Biol 2012
432
13

The G4 genome.
Nancy Maizels, Lucas T Gray. PLoS Genet 2013
346
13

Transcriptome-wide identification of transient RNA G-quadruplexes in human cells.
Sunny Y Yang, Pauline Lejault, Sandy Chevrier, Romain Boidot, A Gordon Robertson, Judy M Y Wong, David Monchaud. Nat Commun 2018
108
12

CX-5461 is a DNA G-quadruplex stabilizer with selective lethality in BRCA1/2 deficient tumours.
Hong Xu, Marco Di Antonio, Steven McKinney, Veena Mathew, Brandon Ho, Nigel J O'Neil, Nancy Dos Santos, Jennifer Silvester, Vivien Wei, Jessica Garcia,[...]. Nat Commun 2017
265
12

Visualization and selective chemical targeting of RNA G-quadruplex structures in the cytoplasm of human cells.
Giulia Biffi, Marco Di Antonio, David Tannahill, Shankar Balasubramanian. Nat Chem 2014
372
12

Chemical-biology approaches to probe DNA and RNA G-quadruplex structures in the genome.
Federica Raguseo, Souroprobho Chowdhury, Aisling Minard, Marco Di Antonio. Chem Commun (Camb) 2020
39
28

Metal Cations in G-Quadruplex Folding and Stability.
Debmalya Bhattacharyya, Gayan Mirihana Arachchilage, Soumitra Basu. Front Chem 2016
270
11

Conformation Selective Antibody Enables Genome Profiling and Leads to Discovery of Parallel G-Quadruplex in Human Telomeres.
Hui-Yun Liu, Qi Zhao, Tian-Peng Zhang, Yue Wu, Yun-Xia Xiong, Shi-Ke Wang, Yuan-Long Ge, Jin-Hui He, Peng Lv, Tian-Miao Ou,[...]. Cell Chem Biol 2016
58
18

G-quadruplexes and helicases.
Oscar Mendoza, Anne Bourdoncle, Jean-Baptiste Boulé, Robert M Brosh, Jean-Louis Mergny. Nucleic Acids Res 2016
253
11

RNA G-quadruplexes cause eIF4A-dependent oncogene translation in cancer.
Andrew L Wolfe, Kamini Singh, Yi Zhong, Philipp Drewe, Vinagolu K Rajasekhar, Viraj R Sanghvi, Konstantinos J Mavrakis, Man Jiang, Justine E Roderick, Joni Van der Meulen,[...]. Nature 2014
374
11

Landscape of G-quadruplex DNA structural regions in breast cancer.
Robert Hänsel-Hertsch, Angela Simeone, Abigail Shea, Winnie W I Hui, Katherine G Zyner, Giovanni Marsico, Oscar M Rueda, Alejandra Bruna, Alistair Martin, Xiaoyun Zhang,[...]. Nat Genet 2020
59
18

DNA damage and genome instability by G-quadruplex ligands are mediated by R loops in human cancer cells.
Alessio De Magis, Stefano G Manzo, Marco Russo, Jessica Marinello, Rita Morigi, Olivier Sordet, Giovanni Capranico. Proc Natl Acad Sci U S A 2019
131
11

Detection of genomic G-quadruplexes in living cells using a small artificial protein.
Ke-Wei Zheng, Jia-Yu Zhang, Yi-de He, Jia-Yuan Gong, Cui-Jiao Wen, Juan-Nan Chen, Yu-Hua Hao, Yong Zhao, Zheng Tan. Nucleic Acids Res 2020
37
29

An RNA G-quadruplex in the 5' UTR of the NRAS proto-oncogene modulates translation.
Sunita Kumari, Anthony Bugaut, Julian L Huppert, Shankar Balasubramanian. Nat Chem Biol 2007
534
10

Crystal structure of parallel quadruplexes from human telomeric DNA.
Gary N Parkinson, Michael P H Lee, Stephen Neidle. Nature 2002
10

Ligand Design to Acquire Specificity to Intended G-Quadruplex Structures.
Sefan Asamitsu, Toshikazu Bando, Hiroshi Sugiyama. Chemistry 2019
85
11

Detection of G-quadruplex DNA in mammalian cells.
Alexander Henderson, Yuliang Wu, Yu Chuan Huang, Elizabeth A Chavez, Jesse Platt, F Brad Johnson, Robert M Brosh, Dipankar Sen, Peter M Lansdorp. Nucleic Acids Res 2014
309
10

DNA Quadruple Helices in Nanotechnology.
Jean-Louis Mergny, Dipankar Sen. Chem Rev 2019
152
10

Targeting MYC Expression through G-Quadruplexes.
Tracy A Brooks, Laurence H Hurley. Genes Cancer 2010
189
10

Making sense of G-quadruplex and i-motif functions in oncogene promoters.
Tracy A Brooks, Samantha Kendrick, Laurence Hurley. FEBS J 2010
314
10

G-quadruplex structures are stable and detectable in human genomic DNA.
Enid Yi Ni Lam, Dario Beraldi, David Tannahill, Shankar Balasubramanian. Nat Commun 2013
299
10


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.