A citation-based method for searching scientific literature

Akash Guru, Ryan J Post, Yi-Yun Ho, Melissa R Warden. Int J Neuropsychopharmacol 2015
Times Cited: 61







List of co-cited articles
380 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Millisecond-timescale, genetically targeted optical control of neural activity.
Edward S Boyden, Feng Zhang, Ernst Bamberg, Georg Nagel, Karl Deisseroth. Nat Neurosci 2005
47

Channelrhodopsin-2, a directly light-gated cation-selective membrane channel.
Georg Nagel, Tanjef Szellas, Wolfram Huhn, Suneel Kateriya, Nona Adeishvili, Peter Berthold, Doris Ollig, Peter Hegemann, Ernst Bamberg. Proc Natl Acad Sci U S A 2003
32

The development and application of optogenetics.
Lief Fenno, Ofer Yizhar, Karl Deisseroth. Annu Rev Neurosci 2011
986
21

Optogenetics in neural systems.
Ofer Yizhar, Lief E Fenno, Thomas J Davidson, Murtaza Mogri, Karl Deisseroth. Neuron 2011
19


Independent optical excitation of distinct neural populations.
Nathan C Klapoetke, Yasunobu Murata, Sung Soo Kim, Stefan R Pulver, Amanda Birdsey-Benson, Yong Ku Cho, Tania K Morimoto, Amy S Chuong, Eric J Carpenter, Zhijian Tian,[...]. Nat Methods 2014
948
14

Integration of optogenetics with complementary methodologies in systems neuroscience.
Christina K Kim, Avishek Adhikari, Karl Deisseroth. Nat Rev Neurosci 2017
296
14

ReaChR: a red-shifted variant of channelrhodopsin enables deep transcranial optogenetic excitation.
John Y Lin, Per Magne Knutsen, Arnaud Muller, David Kleinfeld, Roger Y Tsien. Nat Neurosci 2013
437
13

Temporally precise in vivo control of intracellular signalling.
Raag D Airan, Kimberly R Thompson, Lief E Fenno, Hannah Bernstein, Karl Deisseroth. Nature 2009
433
13

Optogenetics.
Karl Deisseroth. Nat Methods 2011
907
13

Noninvasive optical inhibition with a red-shifted microbial rhodopsin.
Amy S Chuong, Mitra L Miri, Volker Busskamp, Gillian A C Matthews, Leah C Acker, Andreas T Sørensen, Andrew Young, Nathan C Klapoetke, Mike A Henninger, Suhasa B Kodandaramaiah,[...]. Nat Neurosci 2014
278
11

Multimodal fast optical interrogation of neural circuitry.
Feng Zhang, Li-Ping Wang, Martin Brauner, Jana F Liewald, Kenneth Kay, Natalie Watzke, Phillip G Wood, Ernst Bamberg, Georg Nagel, Alexander Gottschalk,[...]. Nature 2007
11

Injectable, cellular-scale optoelectronics with applications for wireless optogenetics.
Tae-il Kim, Jordan G McCall, Yei Hwan Jung, Xian Huang, Edward R Siuda, Yuhang Li, Jizhou Song, Young Min Song, Hsuan An Pao, Rak-Hwan Kim,[...]. Science 2013
508
11

eNpHR: a Natronomonas halorhodopsin enhanced for optogenetic applications.
Viviana Gradinaru, Kimberly R Thompson, Karl Deisseroth. Brain Cell Biol 2008
301
11

Optogenetic interrogation of neural circuits: technology for probing mammalian brain structures.
Feng Zhang, Viviana Gradinaru, Antoine R Adamantidis, Remy Durand, Raag D Airan, Luis de Lecea, Karl Deisseroth. Nat Protoc 2010
411
11

Silencing Neurons: Tools, Applications, and Experimental Constraints.
J Simon Wiegert, Mathias Mahn, Matthias Prigge, Yoav Printz, Ofer Yizhar. Neuron 2017
131
11

Microbial Rhodopsins: Diversity, Mechanisms, and Optogenetic Applications.
Elena G Govorunova, Oleg A Sineshchekov, Hai Li, John L Spudich. Annu Rev Biochem 2017
134
11

Next-generation optical technologies for illuminating genetically targeted brain circuits.
Karl Deisseroth, Guoping Feng, Ania K Majewska, Gero Miesenböck, Alice Ting, Mark J Schnitzer. J Neurosci 2006
394
9

High-performance genetically targetable optical neural silencing by light-driven proton pumps.
Brian Y Chow, Xue Han, Allison S Dobry, Xiaofeng Qian, Amy S Chuong, Mingjie Li, Michael A Henninger, Gabriel M Belfort, Yingxi Lin, Patrick E Monahan,[...]. Nature 2010
737
9

Spatiotemporal control of cell signalling using a light-switchable protein interaction.
Anselm Levskaya, Orion D Weiner, Wendell A Lim, Christopher A Voigt. Nature 2009
642
9

A toolbox of Cre-dependent optogenetic transgenic mice for light-induced activation and silencing.
Linda Madisen, Tianyi Mao, Henner Koch, Jia-min Zhuo, Antal Berenyi, Shigeyoshi Fujisawa, Yun-Wei A Hsu, Alfredo J Garcia, Xuan Gu, Sebastien Zanella,[...]. Nat Neurosci 2012
741
9

NEUROSCIENCE. Natural light-gated anion channels: A family of microbial rhodopsins for advanced optogenetics.
Elena G Govorunova, Oleg A Sineshchekov, Roger Janz, Xiaoqin Liu, John L Spudich. Science 2015
294
9

Ultrafast optogenetic control.
Lisa A Gunaydin, Ofer Yizhar, André Berndt, Vikaas S Sohal, Karl Deisseroth, Peter Hegemann. Nat Neurosci 2010
438
9

Optogenetic Tools for Subcellular Applications in Neuroscience.
Benjamin R Rost, Franziska Schneider-Warme, Dietmar Schmitz, Peter Hegemann. Neuron 2017
150
9

Illuminating cell signalling with optogenetic tools.
Doug Tischer, Orion D Weiner. Nat Rev Mol Cell Biol 2014
220
8

Rapid blue-light-mediated induction of protein interactions in living cells.
Matthew J Kennedy, Robert M Hughes, Leslie A Peteya, Joel W Schwartz, Michael D Ehlers, Chandra L Tucker. Nat Methods 2010
655
8

A genetically encoded photoactivatable Rac controls the motility of living cells.
Yi I Wu, Daniel Frey, Oana I Lungu, Angelika Jaehrig, Ilme Schlichting, Brian Kuhlman, Klaus M Hahn. Nature 2009
741
8

Structure-guided transformation of channelrhodopsin into a light-activated chloride channel.
Andre Berndt, Soo Yeun Lee, Charu Ramakrishnan, Karl Deisseroth. Science 2014
225
8

Closed-loop and activity-guided optogenetic control.
Logan Grosenick, James H Marshel, Karl Deisseroth. Neuron 2015
175
8


Molecular and cellular approaches for diversifying and extending optogenetics.
Viviana Gradinaru, Feng Zhang, Charu Ramakrishnan, Joanna Mattis, Rohit Prakash, Ilka Diester, Inbal Goshen, Kimberly R Thompson, Karl Deisseroth. Cell 2010
605
8

Characterization of engineered channelrhodopsin variants with improved properties and kinetics.
John Y Lin, Michael Z Lin, Paul Steinbach, Roger Y Tsien. Biophys J 2009
422
8

Principles for applying optogenetic tools derived from direct comparative analysis of microbial opsins.
Joanna Mattis, Kay M Tye, Emily A Ferenczi, Charu Ramakrishnan, Daniel J O'Shea, Rohit Prakash, Lisa A Gunaydin, Minsuk Hyun, Lief E Fenno, Viviana Gradinaru,[...]. Nat Methods 2011
439
8

Light activation of channelrhodopsin-2 in excitable cells of Caenorhabditis elegans triggers rapid behavioral responses.
Georg Nagel, Martin Brauner, Jana F Liewald, Nona Adeishvili, Ernst Bamberg, Alexander Gottschalk. Curr Biol 2005
592
8

Evolving the lock to fit the key to create a family of G protein-coupled receptors potently activated by an inert ligand.
Blaine N Armbruster, Xiang Li, Mark H Pausch, Stefan Herlitze, Bryan L Roth. Proc Natl Acad Sci U S A 2007
8

Optogenetic control of heart muscle in vitro and in vivo.
Tobias Bruegmann, Daniela Malan, Michael Hesse, Thomas Beiert, Christopher J Fuegemann, Bernd K Fleischmann, Philipp Sasse. Nat Methods 2010
265
8

Channelrhodopsin-1: a light-gated proton channel in green algae.
Georg Nagel, Doris Ollig, Markus Fuhrmann, Suneel Kateriya, Anna Maria Musti, Ernst Bamberg, Peter Hegemann. Science 2002
622
8

Bi-stable neural state switches.
André Berndt, Ofer Yizhar, Lisa A Gunaydin, Peter Hegemann, Karl Deisseroth. Nat Neurosci 2009
345
8

Submillisecond Optogenetic Control of Neuronal Firing with Two-Photon Holographic Photoactivation of Chronos.
Emiliano Ronzitti, Rossella Conti, Valeria Zampini, Dimitrii Tanese, Amanda J Foust, Nathan Klapoetke, Edward S Boyden, Eirini Papagiakoumou, Valentina Emiliani. J Neurosci 2017
54
9

Recent advances in engineering microbial rhodopsins for optogenetics.
R Scott McIsaac, Claire N Bedbrook, Frances H Arnold. Curr Opin Struct Biol 2015
32
15

Wirelessly powered, fully internal optogenetics for brain, spinal and peripheral circuits in mice.
Kate L Montgomery, Alexander J Yeh, John S Ho, Vivien Tsao, Shrivats Mohan Iyer, Logan Grosenick, Emily A Ferenczi, Yuji Tanabe, Karl Deisseroth, Scott L Delp,[...]. Nat Methods 2015
229
8

Optogenetics enables functional analysis of human embryonic stem cell-derived grafts in a Parkinson's disease model.
Julius A Steinbeck, Se Joon Choi, Ana Mrejeru, Yosif Ganat, Karl Deisseroth, David Sulzer, Eugene V Mosharov, Lorenz Studer. Nat Biotechnol 2015
172
8

Principles of Optogenetic Methods and Their Application to Cardiac Experimental Systems.
Emily A Ferenczi, Xiaoqiu Tan, Christopher L-H Huang. Front Physiol 2019
28
17

DREADDs for Neuroscientists.
Bryan L Roth. Neuron 2016
654
8

Light-induced activation of distinct modulatory neurons triggers appetitive or aversive learning in Drosophila larvae.
Christian Schroll, Thomas Riemensperger, Daniel Bucher, Julia Ehmer, Thomas Völler, Karen Erbguth, Bertram Gerber, Thomas Hendel, Georg Nagel, Erich Buchner,[...]. Curr Biol 2006
392
6

Multiplex genome engineering using CRISPR/Cas systems.
Le Cong, F Ann Ran, David Cox, Shuailiang Lin, Robert Barretto, Naomi Habib, Patrick D Hsu, Xuebing Wu, Wenyan Jiang, Luciano A Marraffini,[...]. Science 2013
6

Optical control of protein activity by fluorescent protein domains.
Xin X Zhou, Hokyung K Chung, Amy J Lam, Michael Z Lin. Science 2012
181
6


Improved expression of halorhodopsin for light-induced silencing of neuronal activity.
Shengli Zhao, Catarina Cunha, Feng Zhang, Qun Liu, Bernd Gloss, Karl Deisseroth, George J Augustine, Guoping Feng. Brain Cell Biol 2008
120
6

Conversion of channelrhodopsin into a light-gated chloride channel.
Jonas Wietek, J Simon Wiegert, Nona Adeishvili, Franziska Schneider, Hiroshi Watanabe, Satoshi P Tsunoda, Arend Vogt, Marcus Elstner, Thomas G Oertner, Peter Hegemann. Science 2014
209
6


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.