A citation-based method for searching scientific literature

Narayanan Kasthuri, Kenneth Jeffrey Hayworth, Daniel Raimund Berger, Richard Lee Schalek, José Angel Conchello, Seymour Knowles-Barley, Dongil Lee, Amelio Vázquez-Reina, Verena Kaynig, Thouis Raymond Jones, Mike Roberts, Josh Lyskowski Morgan, Juan Carlos Tapia, H Sebastian Seung, William Gray Roncal, Joshua Tzvi Vogelstein, Randal Burns, Daniel Lewis Sussman, Carey Eldin Priebe, Hanspeter Pfister, Jeff William Lichtman. Cell 2015
Times Cited: 431







List of co-cited articles
1058 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Dense connectomic reconstruction in layer 4 of the somatosensory cortex.
Alessandro Motta, Manuel Berning, Kevin M Boergens, Benedikt Staffler, Marcel Beining, Sahil Loomba, Philipp Hennig, Heiko Wissler, Moritz Helmstaedter. Science 2019
64
37

The structure of the nervous system of the nematode Caenorhabditis elegans.
J G White, E Southgate, J N Thomson, S Brenner. Philos Trans R Soc Lond B Biol Sci 1986
16

Anatomy and function of an excitatory network in the visual cortex.
Wei-Chung Allen Lee, Vincent Bonin, Michael Reed, Brett J Graham, Greg Hood, Katie Glattfelder, R Clay Reid. Nature 2016
198
15

Connectomic reconstruction of the inner plexiform layer in the mouse retina.
Moritz Helmstaedter, Kevin L Briggman, Srinivas C Turaga, Viren Jain, H Sebastian Seung, Winfried Denk. Nature 2013
468
14


Network anatomy and in vivo physiology of visual cortical neurons.
Davi D Bock, Wei-Chung Allen Lee, Aaron M Kerlin, Mark L Andermann, Greg Hood, Arthur W Wetzel, Sergey Yurgenson, Edward R Soucy, Hyon Suk Kim, R Clay Reid. Nature 2011
488
13

Wiring specificity in the direction-selectivity circuit of the retina.
Kevin L Briggman, Moritz Helmstaedter, Winfried Denk. Nature 2011
494
13

A connectome and analysis of the adult Drosophila central brain.
Louis K Scheffer, C Shan Xu, Michal Januszewski, Zhiyuan Lu, Shin-Ya Takemura, Kenneth J Hayworth, Gary B Huang, Kazunori Shinomiya, Jeremy Maitlin-Shepard, Stuart Berg,[...]. Elife 2020
154
13

TrakEM2 software for neural circuit reconstruction.
Albert Cardona, Stephan Saalfeld, Johannes Schindelin, Ignacio Arganda-Carreras, Stephan Preibisch, Mark Longair, Pavel Tomancak, Volker Hartenstein, Rodney J Douglas. PLoS One 2012
442
12

High-precision automated reconstruction of neurons with flood-filling networks.
Michał Januszewski, Jörgen Kornfeld, Peter H Li, Art Pope, Tim Blakely, Larry Lindsey, Jeremy Maitin-Shepard, Mike Tyka, Winfried Denk, Viren Jain. Nat Methods 2018
78
15

Fiji: an open-source platform for biological-image analysis.
Johannes Schindelin, Ignacio Arganda-Carreras, Erwin Frise, Verena Kaynig, Mark Longair, Tobias Pietzsch, Stephan Preibisch, Curtis Rueden, Stephan Saalfeld, Benjamin Schmid,[...]. Nat Methods 2012
11

Serial-section electron microscopy using automated tape-collecting ultramicrotome (ATUM).
Valentina Baena, Richard Lee Schalek, Jeff William Lichtman, Mark Terasaki. Methods Cell Biol 2019
26
42

Ultrastructural analysis of hippocampal neuropil from the connectomics perspective.
Yuriy Mishchenko, Tao Hu, Josef Spacek, John Mendenhall, Kristen M Harris, Dmitri B Chklovskii. Neuron 2010
176
11

Reconstruction and Simulation of Neocortical Microcircuitry.
Henry Markram, Eilif Muller, Srikanth Ramaswamy, Michael W Reimann, Marwan Abdellah, Carlos Aguado Sanchez, Anastasia Ailamaki, Lidia Alonso-Nanclares, Nicolas Antille, Selim Arsever,[...]. Cell 2015
523
10

Nanoconnectomic upper bound on the variability of synaptic plasticity.
Thomas M Bartol, Cailey Bromer, Justin Kinney, Michael A Chirillo, Jennifer N Bourne, Kristen M Harris, Terrence J Sejnowski. Elife 2015
104
10

A mesoscale connectome of the mouse brain.
Seung Wook Oh, Julie A Harris, Lydia Ng, Brent Winslow, Nicholas Cain, Stefan Mihalas, Quanxin Wang, Chris Lau, Leonard Kuan, Alex M Henry,[...]. Nature 2014
10

Monosynaptic restriction of transsynaptic tracing from single, genetically targeted neurons.
Ian R Wickersham, David C Lyon, Richard J O Barnard, Takuma Mori, Stefan Finke, Karl-Klaus Conzelmann, John A T Young, Edward M Callaway. Neuron 2007
713
9


Enhanced FIB-SEM systems for large-volume 3D imaging.
C Shan Xu, Kenneth J Hayworth, Zhiyuan Lu, Patricia Grob, Ahmed M Hassan, José G García-Cerdán, Krishna K Niyogi, Eva Nogales, Richard J Weinberg, Harald F Hess. Elife 2017
117
9

GABAergic Interneurons in the Neocortex: From Cellular Properties to Circuits.
Robin Tremblay, Soohyun Lee, Bernardo Rudy. Neuron 2016
691
8


Reconstruction of 1,000 Projection Neurons Reveals New Cell Types and Organization of Long-Range Connectivity in the Mouse Brain.
Johan Winnubst, Erhan Bas, Tiago A Ferreira, Zhuhao Wu, Michael N Economo, Patrick Edson, Ben J Arthur, Christopher Bruns, Konrad Rokicki, David Schauder,[...]. Cell 2019
129
8

Axonal synapse sorting in medial entorhinal cortex.
Helene Schmidt, Anjali Gour, Jakob Straehle, Kevin M Boergens, Michael Brecht, Moritz Helmstaedter. Nature 2017
52
15

A Complete Electron Microscopy Volume of the Brain of Adult Drosophila melanogaster.
Zhihao Zheng, J Scott Lauritzen, Eric Perlman, Camenzind G Robinson, Matthew Nichols, Daniel Milkie, Omar Torrens, John Price, Corey B Fisher, Nadiya Sharifi,[...]. Cell 2018
256
8

Whole-animal connectomes of both Caenorhabditis elegans sexes.
Steven J Cook, Travis A Jarrell, Christopher A Brittin, Yi Wang, Adam E Bloniarz, Maksim A Yakovlev, Ken C Q Nguyen, Leo T-H Tang, Emily A Bayer, Janet S Duerr,[...]. Nature 2019
164
8

Single excitatory axons form clustered synapses onto CA1 pyramidal cell dendrites.
Erik B Bloss, Mark S Cembrowski, Bill Karsh, Jennifer Colonell, Richard D Fetter, Nelson Spruston. Nat Neurosci 2018
50
16

Shared and distinct transcriptomic cell types across neocortical areas.
Bosiljka Tasic, Zizhen Yao, Lucas T Graybuck, Kimberly A Smith, Thuc Nghi Nguyen, Darren Bertagnolli, Jeff Goldy, Emma Garren, Michael N Economo, Sarada Viswanathan,[...]. Nature 2018
506
7

Large-volume en-bloc staining for electron microscopy-based connectomics.
Yunfeng Hua, Philip Laserstein, Moritz Helmstaedter. Nat Commun 2015
93
7

Space-time wiring specificity supports direction selectivity in the retina.
Jinseop S Kim, Matthew J Greene, Aleksandar Zlateski, Kisuk Lee, Mark Richardson, Srinivas C Turaga, Michael Purcaro, Matthew Balkam, Amy Robinson, Bardia F Behabadi,[...]. Nature 2014
236
7

Ultrastructure of dendritic spines: correlation between synaptic and spine morphologies.
Jon I Arellano, Ruth Benavides-Piccione, Javier Defelipe, Rafael Yuste. Front Neurosci 2007
305
7

The Fuzzy Logic of Network Connectivity in Mouse Visual Thalamus.
Josh Lyskowski Morgan, Daniel Raimund Berger, Arthur Willis Wetzel, Jeff William Lichtman. Cell 2016
115
7

VAST (Volume Annotation and Segmentation Tool): Efficient Manual and Semi-Automatic Labeling of Large 3D Image Stacks.
Daniel R Berger, H Sebastian Seung, Jeff W Lichtman. Front Neural Circuits 2018
40
17

Ultrastructure of synapses in the mammalian brain.
Kristen M Harris, Richard J Weinberg. Cold Spring Harb Perspect Biol 2012
233
7

Volume electron microscopy for neuronal circuit reconstruction.
Kevin L Briggman, Davi D Bock. Curr Opin Neurobiol 2012
174
7

The big data challenges of connectomics.
Jeff W Lichtman, Hanspeter Pfister, Nir Shavit. Nat Neurosci 2014
72
9

The importance of dendritic mitochondria in the morphogenesis and plasticity of spines and synapses.
Zheng Li, Ken-Ichi Okamoto, Yasunori Hayashi, Morgan Sheng. Cell 2004
6


A synaptic organizing principle for cortical neuronal groups.
Rodrigo Perin, Thomas K Berger, Henry Markram. Proc Natl Acad Sci U S A 2011
345
6

The excitatory neuronal network of the C2 barrel column in mouse primary somatosensory cortex.
Sandrine Lefort, Christian Tomm, J-C Floyd Sarria, Carl C H Petersen. Neuron 2009
505
6


Viral-genetic tracing of the input-output organization of a central noradrenaline circuit.
Lindsay A Schwarz, Kazunari Miyamichi, Xiaojing J Gao, Kevin T Beier, Brandon Weissbourd, Katherine E DeLoach, Jing Ren, Sandy Ibanes, Robert C Malenka, Eric J Kremer,[...]. Nature 2015
342
6

High-contrast en bloc staining of neuronal tissue for field emission scanning electron microscopy.
Juan Carlos Tapia, Narayanan Kasthuri, Kenneth J Hayworth, Richard Schalek, Jeff W Lichtman, Stephen J Smith, JoAnn Buchanan. Nat Protoc 2012
140
6



Elastic volume reconstruction from series of ultra-thin microscopy sections.
Stephan Saalfeld, Richard Fetter, Albert Cardona, Pavel Tomancak. Nat Methods 2012
126
6

Long-term in vivo imaging of experience-dependent synaptic plasticity in adult cortex.
Joshua T Trachtenberg, Brian E Chen, Graham W Knott, Guoping Feng, Joshua R Sanes, Egbert Welker, Karel Svoboda. Nature 2002
6

Geometry and structural plasticity of synaptic connectivity.
Armen Stepanyants, Patrick R Hof, Dmitri B Chklovskii. Neuron 2002
217
6

Structural basis of long-term potentiation in single dendritic spines.
Masanori Matsuzaki, Naoki Honkura, Graham C R Ellis-Davies, Haruo Kasai. Nature 2004
6

The effects of aging on neuropil structure in mouse somatosensory cortex-A 3D electron microscopy analysis of layer 1.
Corrado Calì, Marta Wawrzyniak, Carlos Becker, Bohumil Maco, Marco Cantoni, Anne Jorstad, Biagio Nigro, Federico Grillo, Vincenzo De Paola, Pascal Fua,[...]. PLoS One 2018
21
28

Counting Synapses Using FIB/SEM Microscopy: A True Revolution for Ultrastructural Volume Reconstruction.
Angel Merchán-Pérez, José-Rodrigo Rodriguez, Lidia Alonso-Nanclares, Andreas Schertel, Javier Defelipe. Front Neuroanat 2009
117
6


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.