A citation-based method for searching scientific literature

Sumit Middha, Noralane M Lindor, Shannon K McDonnell, Janet E Olson, Kiley J Johnson, Eric D Wieben, Gianrico Farrugia, James R Cerhan, Stephen N Thibodeau. Front Genet 2015
Times Cited: 6







List of co-cited articles
24 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


ACMG recommendations for reporting of incidental findings in clinical exome and genome sequencing.
Robert C Green, Jonathan S Berg, Wayne W Grody, Sarah S Kalia, Bruce R Korf, Christa L Martin, Amy L McGuire, Robert L Nussbaum, Julianne M O'Daniel, Kelly E Ormond,[...]. Genet Med 2013
50

Molecular findings among patients referred for clinical whole-exome sequencing.
Yaping Yang, Donna M Muzny, Fan Xia, Zhiyv Niu, Richard Person, Yan Ding, Patricia Ward, Alicia Braxton, Min Wang, Christian Buhay,[...]. JAMA 2014
792
50


The Sequence Alignment/Map format and SAMtools.
Heng Li, Bob Handsaker, Alec Wysoker, Tim Fennell, Jue Ruan, Nils Homer, Gabor Marth, Goncalo Abecasis, Richard Durbin. Bioinformatics 2009
33

Whole-genome sequencing in health care: recommendations of the European Society of Human Genetics.
Carla G van El, Martina C Cornel, Pascal Borry, Ros J Hastings, Florence Fellmann, Shirley V Hodgson, Heidi C Howard, Anne Cambon-Thomsen, Bartha M Knoppers, Hanne Meijers-Heijboer,[...]. Eur J Hum Genet 2013
203
33

Low concordance of multiple variant-calling pipelines: practical implications for exome and genome sequencing.
Jason O'Rawe, Tao Jiang, Guangqing Sun, Yiyang Wu, Wei Wang, Jingchu Hu, Paul Bodily, Lifeng Tian, Hakon Hakonarson, W Evan Johnson,[...]. Genome Med 2013
276
33

Whole-genome sequencing is more powerful than whole-exome sequencing for detecting exome variants.
Aziz Belkadi, Alexandre Bolze, Yuval Itan, Aurélie Cobat, Quentin B Vincent, Alexander Antipenko, Lei Shang, Bertrand Boisson, Jean-Laurent Casanova, Laurent Abel. Proc Natl Acad Sci U S A 2015
243
33

Guidelines for investigating causality of sequence variants in human disease.
D G MacArthur, T A Manolio, D P Dimmock, H L Rehm, J Shendure, G R Abecasis, D R Adams, R B Altman, S E Antonarakis, E A Ashley,[...]. Nature 2014
767
33

Next generation sequencing and the future of genetic diagnosis.
Katja Lohmann, Christine Klein. Neurotherapeutics 2014
76
33

Clinical whole-exome sequencing for the diagnosis of mendelian disorders.
Yaping Yang, Donna M Muzny, Jeffrey G Reid, Matthew N Bainbridge, Alecia Willis, Patricia A Ward, Alicia Braxton, Joke Beuten, Fan Xia, Zhiyv Niu,[...]. N Engl J Med 2013
33

Genetic diagnosis by whole exome capture and massively parallel DNA sequencing.
Murim Choi, Ute I Scholl, Weizhen Ji, Tiewen Liu, Irina R Tikhonova, Paul Zumbo, Ahmet Nayir, Ayşin Bakkaloğlu, Seza Ozen, Sami Sanjad,[...]. Proc Natl Acad Sci U S A 2009
833
33

FORGE Canada Consortium: outcomes of a 2-year national rare-disease gene-discovery project.
Chandree L Beaulieu, Jacek Majewski, Jeremy Schwartzentruber, Mark E Samuels, Bridget A Fernandez, Francois P Bernier, Michael Brudno, Bartha Knoppers, Janet Marcadier, David Dyment,[...]. Am J Hum Genet 2014
147
33

Enhanced utility of family-centered diagnostic exome sequencing with inheritance model-based analysis: results from 500 unselected families with undiagnosed genetic conditions.
Kelly D Farwell, Layla Shahmirzadi, Dima El-Khechen, Zöe Powis, Elizabeth C Chao, Brigette Tippin Davis, Ruth M Baxter, Wenqi Zeng, Cameron Mroske, Melissa C Parra,[...]. Genet Med 2015
285
33


Genetic diagnosis of developmental disorders in the DDD study: a scalable analysis of genome-wide research data.
Caroline F Wright, Tomas W Fitzgerald, Wendy D Jones, Stephen Clayton, Jeremy F McRae, Margriet van Kogelenberg, Daniel A King, Kirsty Ambridge, Daniel M Barrett, Tanya Bayzetinova,[...]. Lancet 2015
363
33

What is the clinical utility of genetic testing?
Scott D Grosse, Muin J Khoury. Genet Med 2006
171
33


Clinical exome sequencing for genetic identification of rare Mendelian disorders.
Hane Lee, Joshua L Deignan, Naghmeh Dorrani, Samuel P Strom, Sibel Kantarci, Fabiola Quintero-Rivera, Kingshuk Das, Traci Toy, Bret Harry, Michael Yourshaw,[...]. JAMA 2014
558
33

Diagnostic clinical genome and exome sequencing.
Leslie G Biesecker, Robert C Green. N Engl J Med 2014
340
33

Genome sequencing identifies major causes of severe intellectual disability.
Christian Gilissen, Jayne Y Hehir-Kwa, Djie Tjwan Thung, Maartje van de Vorst, Bregje W M van Bon, Marjolein H Willemsen, Michael Kwint, Irene M Janssen, Alexander Hoischen, Annette Schenck,[...]. Nature 2014
619
33

Utility of whole-exome sequencing for those near the end of the diagnostic odyssey: time to address gaps in care.
S L Sawyer, T Hartley, D A Dyment, C L Beaulieu, J Schwartzentruber, A Smith, H M Bedford, G Bernard, F P Bernier, B Brais,[...]. Clin Genet 2016
201
33

Points to Consider: Ethical, Legal, and Psychosocial Implications of Genetic Testing in Children and Adolescents.
Jeffrey R Botkin, John W Belmont, Jonathan S Berg, Benjamin E Berkman, Yvonne Bombard, Ingrid A Holm, Howard P Levy, Kelly E Ormond, Howard M Saal, Nancy B Spinner,[...]. Am J Hum Genet 2015
215
33

Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.
Sue Richards, Nazneen Aziz, Sherri Bale, David Bick, Soma Das, Julie Gastier-Foster, Wayne W Grody, Madhuri Hegde, Elaine Lyon, Elaine Spector,[...]. Genet Med 2015
33

Practical considerations in the clinical application of whole-exome sequencing.
V Shashi, A McConkie-Rosell, K Schoch, V Kasturi, C Rehder, Y H Jiang, D B Goldstein, M T McDonald. Clin Genet 2016
35
33

Sensitive detection of somatic point mutations in impure and heterogeneous cancer samples.
Kristian Cibulskis, Michael S Lawrence, Scott L Carter, Andrey Sivachenko, David Jaffe, Carrie Sougnez, Stacey Gabriel, Matthew Meyerson, Eric S Lander, Gad Getz. Nat Biotechnol 2013
16

Relationships between drug activity in NCI preclinical in vitro and in vivo models and early clinical trials.
J I Johnson, S Decker, D Zaharevitz, L V Rubinstein, J M Venditti, S Schepartz, S Kalyandrug, M Christian, S Arbuck, M Hollingshead,[...]. Br J Cancer 2001
540
16

Development of three human small cell lung cancer models in nude mice.
H H Fiebig, H A Neumann, H Henss, H Koch, D Kaiser, H Arnold. Recent Results Cancer Res 1985
39
16

Virmid: accurate detection of somatic mutations with sample impurity inference.
Sangwoo Kim, Kyowon Jeong, Kunal Bhutani, Jeong Lee, Anand Patel, Eric Scott, Hojung Nam, Hayan Lee, Joseph G Gleeson, Vineet Bafna. Genome Biol 2013
41
16

Tumor grafts derived from women with breast cancer authentically reflect tumor pathology, growth, metastasis and disease outcomes.
Yoko S DeRose, Guoying Wang, Yi-Chun Lin, Philip S Bernard, Saundra S Buys, Mark T W Ebbert, Rachel Factor, Cindy Matsen, Brett A Milash, Edward Nelson,[...]. Nat Med 2011
576
16



Cancer incidence and mortality worldwide: sources, methods and major patterns in GLOBOCAN 2012.
Jacques Ferlay, Isabelle Soerjomataram, Rajesh Dikshit, Sultan Eser, Colin Mathers, Marise Rebelo, Donald Maxwell Parkin, David Forman, Freddie Bray. Int J Cancer 2015
16


Intramuscular Transplantation Improves Engraftment Rates for Esophageal Patient-Derived Tumor Xenografts.
Matthew Read, David Liu, Cuong P Duong, Carleen Cullinane, William K Murray, Christina M Fennell, Jake Shortt, David Westerman, Paul Burton, Nicholas J Clemons,[...]. Ann Surg Oncol 2016
14
16

Phenotypic instability of Saos-2 cells in long-term culture.
Heinz-Juergen Hausser, Rolf E Brenner. Biochem Biophys Res Commun 2005
80
16

Establishment of patient-derived cancer xenografts in immunodeficient NOG mice.
Tsuyoshi Chijiwa, Kenji Kawai, Akira Noguchi, Hidemitsu Sato, Akimune Hayashi, Haruhiko Cho, Manabu Shiozawa, Takeshi Kishida, Soichiro Morinaga, Tomoyuki Yokose,[...]. Int J Oncol 2015
31
16

Perioperative chemotherapy versus surgery alone for resectable gastroesophageal cancer.
David Cunningham, William H Allum, Sally P Stenning, Jeremy N Thompson, Cornelis J H Van de Velde, Marianne Nicolson, J Howard Scarffe, Fiona J Lofts, Stephen J Falk, Timothy J Iveson,[...]. N Engl J Med 2006
16

Recipient risk factors associated with delayed graft function: a paired kidney analysis.
Mona D Doshi, Neha Garg, Peter P Reese, Chirag R Parikh. Transplantation 2011
59
16

High fidelity patient-derived xenografts for accelerating prostate cancer discovery and drug development.
Dong Lin, Alexander W Wyatt, Hui Xue, Yuwei Wang, Xin Dong, Anne Haegert, Rebecca Wu, Sonal Brahmbhatt, Fan Mo, Lina Jong,[...]. Cancer Res 2014
210
16

Establishment and characterization of in vivo human tumor models in the NOD/SCID/gamma(c)(null) mouse.
Etsuko Fujii, Masami Suzuki, Koichi Matsubara, Miho Watanabe, Yu Jau Chen, Kenji Adachi, Yasuyuki Ohnishi, Manabu Tanigawa, Masayuki Tsuchiya, Norikazu Tamaoki. Pathol Int 2008
25
16

Primary esophageal and gastro-esophageal junction cancer xenograft models: clinicopathological features and engraftment.
Lorin Dodbiba, Jennifer Teichman, Andrew Fleet, Henry Thai, Bin Sun, Devang Panchal, Devalben Patel, Alvina Tse, Zhuo Chen, Olusola O Faluyi,[...]. Lab Invest 2013
20
16

A primary xenograft model of small-cell lung cancer reveals irreversible changes in gene expression imposed by culture in vitro.
Vincent C Daniel, Luigi Marchionni, Jared S Hierman, Jonathan T Rhodes, Wendy L Devereux, Charles M Rudin, Rex Yung, Giovanni Parmigiani, Marion Dorsch, Craig D Peacock,[...]. Cancer Res 2009
308
16

Patient-derived xenograft models: an emerging platform for translational cancer research.
Manuel Hidalgo, Frederic Amant, Andrew V Biankin, Eva Budinská, Annette T Byrne, Carlos Caldas, Robert B Clarke, Steven de Jong, Jos Jonkers, Gunhild Mari Mælandsmo,[...]. Cancer Discov 2014
784
16

Molecular profiling of patient-derived breast cancer xenografts.
Fabien Reyal, Charlotte Guyader, Charles Decraene, Carlo Lucchesi, Nathalie Auger, Franck Assayag, Ludmilla De Plater, David Gentien, Marie-France Poupon, Paul Cottu,[...]. Breast Cancer Res 2012
124
16

The Epstein-Barr virus and the pathogenesis of lymphoma.
Martina Vockerodt, Lee-Fah Yap, Claire Shannon-Lowe, Helen Curley, Wenbin Wei, Katerina Vrzalikova, Paul G Murray. J Pathol 2015
101
16

Ramucirumab monotherapy for previously treated advanced gastric or gastro-oesophageal junction adenocarcinoma (REGARD): an international, randomised, multicentre, placebo-controlled, phase 3 trial.
Charles S Fuchs, Jiri Tomasek, Cho Jae Yong, Filip Dumitru, Rodolfo Passalacqua, Chanchal Goswami, Howard Safran, Lucas Vieira Dos Santos, Giuseppe Aprile, David R Ferry,[...]. Lancet 2014
16

Anticancer drug response and expression of molecular markers in early-passage xenotransplanted colon carcinomas.
I Fichtner, W Slisow, J Gill, M Becker, B Elbe, T Hillebrand, M Bibby. Eur J Cancer 2004
108
16


Matrigel alters the pathophysiology of orthotopic human breast adenocarcinoma xenografts with implications for nanomedicine evaluation.
Adam J Shuhendler, Preethy Prasad, Ping Cai, Kelvin K W Hui, Jeffrey T Henderson, Andrew M Rauth, Xiao Yu Wu. Nanomedicine 2013
10
16

Molecular analysis of gastric cancer identifies subtypes associated with distinct clinical outcomes.
Razvan Cristescu, Jeeyun Lee, Michael Nebozhyn, Kyoung-Mee Kim, Jason C Ting, Swee Seong Wong, Jiangang Liu, Yong Gang Yue, Jian Wang, Kun Yu,[...]. Nat Med 2015
811
16


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.