A citation-based method for searching scientific literature

Robert M Martin, Gohar Ter-Avetisyan, Henry D Herce, Anne K Ludwig, Gisela Lättig-Tünnemann, M Cristina Cardoso. Nucleus 2015
Times Cited: 70







List of co-cited articles
401 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Characterization and prediction of protein nucleolar localization sequences.
Michelle S Scott, François-Michel Boisvert, Mark D McDowall, Angus I Lamond, Geoffrey J Barton. Nucleic Acids Res 2010
118
21

A charge-dependent mechanism is responsible for the dynamic accumulation of proteins inside nucleoli.
Yana R Musinova, Eugenia Y Kananykhina, Daria M Potashnikova, Olga M Lisitsyna, Eugene V Sheval. Biochim Biophys Acta 2015
34
41

Nucleolar targeting: the hub of the matter.
Edward Emmott, Julian A Hiscox. EMBO Rep 2009
211
20

NoD: a Nucleolar localization sequence detector for eukaryotic and viral proteins.
Michelle S Scott, Peter V Troshin, Geoffrey J Barton. BMC Bioinformatics 2011
90
17

The nucleolus under stress.
Séverine Boulon, Belinda J Westman, Saskia Hutten, François-Michel Boisvert, Angus I Lamond. Mol Cell 2010
657
15

Nucleolar proteome dynamics.
Jens S Andersen, Yun W Lam, Anthony K L Leung, Shao-En Ong, Carol E Lyon, Angus I Lamond, Matthias Mann. Nature 2005
865
14

The multifunctional nucleolus.
François-Michel Boisvert, Silvana van Koningsbruggen, Joaquín Navascués, Angus I Lamond. Nat Rev Mol Cell Biol 2007
12

Coexisting Liquid Phases Underlie Nucleolar Subcompartments.
Marina Feric, Nilesh Vaidya, Tyler S Harmon, Diana M Mitrea, Lian Zhu, Tiffany M Richardson, Richard W Kriwacki, Rohit V Pappu, Clifford P Brangwynne. Cell 2016
860
12


The nucleolus: structure/function relationship in RNA metabolism.
Danièle Hernandez-Verdun, Pascal Roussel, Marc Thiry, Valentina Sirri, Denis L J Lafontaine. Wiley Interdiscip Rev RNA 2010
159
10

Active liquid-like behavior of nucleoli determines their size and shape in Xenopus laevis oocytes.
Clifford P Brangwynne, Timothy J Mitchison, Anthony A Hyman. Proc Natl Acad Sci U S A 2011
674
10

Nucleolar localization/retention signal is responsible for transient accumulation of histone H2B in the nucleolus through electrostatic interactions.
Yana R Musinova, Olga M Lisitsyna, Sergey A Golyshev, Alexander I Tuzhikov, Vladimir Y Polyakov, Eugene V Sheval. Biochim Biophys Acta 2011
31
22

Nucleolus: the fascinating nuclear body.
Valentina Sirri, Silvio Urcuqui-Inchima, Pascal Roussel, Danièle Hernandez-Verdun. Histochem Cell Biol 2008
259
8

Birth of a nucleolus: the evolution of nucleolar compartments.
Marc Thiry, Denis L J Lafontaine. Trends Cell Biol 2005
148
8

Charge versus sequence for nuclear/nucleolar localization of plant ribosomal proteins.
Raghavendra P Savada, Peta C Bonham-Smith. Plant Mol Biol 2013
12
50

To be or not to be in the nucleolus.
M Carmo-Fonseca, L Mendes-Soares, I Campos. Nat Cell Biol 2000
280
8

Nucleophosmin integrates within the nucleolus via multi-modal interactions with proteins displaying R-rich linear motifs and rRNA.
Diana M Mitrea, Jaclyn A Cika, Clifford S Guy, David Ban, Priya R Banerjee, Christopher B Stanley, Amanda Nourse, Ashok A Deniz, Richard W Kriwacki. Elife 2016
268
8

Nucleolus: A Central Hub for Nuclear Functions.
Olga V Iarovaia, Elizaveta P Minina, Eugene V Sheval, Daria Onichtchouk, Svetlana Dokudovskaya, Sergey V Razin, Yegor S Vassetzky. Trends Cell Biol 2019
64
9

Biomolecular condensates: organizers of cellular biochemistry.
Salman F Banani, Hyun O Lee, Anthony A Hyman, Michael K Rosen. Nat Rev Mol Cell Biol 2017
8

The nucleolus as a multiphase liquid condensate.
Denis L J Lafontaine, Joshua A Riback, Rümeyza Bascetin, Clifford P Brangwynne. Nat Rev Mol Cell Biol 2021
173
8

Germline P granules are liquid droplets that localize by controlled dissolution/condensation.
Clifford P Brangwynne, Christian R Eckmann, David S Courson, Agata Rybarska, Carsten Hoege, Jöbin Gharakhani, Frank Jülicher, Anthony A Hyman. Science 2009
7

Classical nuclear localization signals: definition, function, and interaction with importin alpha.
Allison Lange, Ryan E Mills, Christopher J Lange, Murray Stewart, Scott E Devine, Anita H Corbett. J Biol Chem 2007
810
7


Mapping the nucleolar proteome reveals a spatiotemporal organization related to intrinsic protein disorder.
Lovisa Stenström, Diana Mahdessian, Christian Gnann, Anthony J Cesnik, Wei Ouyang, Manuel D Leonetti, Mathias Uhlén, Sara Cuylen-Haering, Peter J Thul, Emma Lundberg. Mol Syst Biol 2020
38
13

Chemotherapeutic drugs inhibit ribosome biogenesis at various levels.
Kaspar Burger, Bastian Mühl, Thomas Harasim, Michaela Rohrmoser, Anastassia Malamoussi, Mathias Orban, Markus Kellner, Anita Gruber-Eber, Elisabeth Kremmer, Michael Hölzel,[...]. J Biol Chem 2010
286
5


Nucleolin participates in DNA double-strand break-induced damage response through MDC1-dependent pathway.
Junya Kobayashi, Hiroko Fujimoto, Jun Sato, Ikue Hayashi, Sandeep Burma, Shinya Matsuura, David J Chen, Kenshi Komatsu. PLoS One 2012
55
7

Structure and function of the nucleolus.
U Scheer, R Hock. Curr Opin Cell Biol 1999
293
5

An overview of pre-ribosomal RNA processing in eukaryotes.
Anthony K Henras, Célia Plisson-Chastang, Marie-Françoise O'Donohue, Anirban Chakraborty, Pierre-Emmanuel Gleizes. Wiley Interdiscip Rev RNA 2015
341
5

Nucleolar accumulation of APE1 depends on charged lysine residues that undergo acetylation upon genotoxic stress and modulate its BER activity in cells.
Lisa Lirussi, Giulia Antoniali, Carlo Vascotto, Chiara D'Ambrosio, Mattia Poletto, Milena Romanello, Daniela Marasco, Marilisa Leone, Franco Quadrifoglio, Kishor K Bhakat,[...]. Mol Biol Cell 2012
74
5

Nucleation by rRNA Dictates the Precision of Nucleolus Assembly.
Hanieh Falahati, Bobbie Pelham-Webb, Shelby Blythe, Eric Wieschaus. Curr Biol 2016
104
5

Liquid droplet formation by HP1α suggests a role for phase separation in heterochromatin.
Adam G Larson, Daniel Elnatan, Madeline M Keenen, Michael J Trnka, Jonathan B Johnston, Alma L Burlingame, David A Agard, Sy Redding, Geeta J Narlikar. Nature 2017
838
5

Phase separation drives heterochromatin domain formation.
Amy R Strom, Alexander V Emelyanov, Mustafa Mir, Dmitry V Fyodorov, Xavier Darzacq, Gary H Karpen. Nature 2017
896
5

Nuclear speckles.
David L Spector, Angus I Lamond. Cold Spring Harb Perspect Biol 2011
496
5

Formation and Maturation of Phase-Separated Liquid Droplets by RNA-Binding Proteins.
Yuan Lin, David S W Protter, Michael K Rosen, Roy Parker. Mol Cell 2015
881
5

Biogenesis and function of nuclear bodies.
Yuntao S Mao, Bin Zhang, David L Spector. Trends Genet 2011
454
5


NLStradamus: a simple Hidden Markov Model for nuclear localization signal prediction.
Alex N Nguyen Ba, Anastassia Pogoutse, Nicholas Provart, Alan M Moses. BMC Bioinformatics 2009
356
5

Fiji: an open-source platform for biological-image analysis.
Johannes Schindelin, Ignacio Arganda-Carreras, Erwin Frise, Verena Kaynig, Mark Longair, Tobias Pietzsch, Stephan Preibisch, Curtis Rueden, Stephan Saalfeld, Benjamin Schmid,[...]. Nat Methods 2012
5


Evaluating phase separation in live cells: diagnosis, caveats, and functional consequences.
David T McSwiggen, Mustafa Mir, Xavier Darzacq, Robert Tjian. Genes Dev 2019
263
5

Dynamic regulation of nucleolar architecture.
Attila Németh, Ingrid Grummt. Curr Opin Cell Biol 2018
60
6

Structure and functions of nucleolin.
H Ginisty, H Sicard, B Roger, P Bouvet. J Cell Sci 1999
514
4

Nucleolar stress with and without p53.
Allison James, Yubo Wang, Himanshu Raje, Raphyel Rosby, Patrick DiMario. Nucleus 2014
173
4

Nucleolin: The most abundant multifunctional phosphoprotein of nucleolus.
Marjan M Tajrishi, Renu Tuteja, Narendra Tuteja. Commun Integr Biol 2011
142
4

The nucleolus: an emerging target for cancer therapy.
Nadine Hein, Katherine M Hannan, Amee J George, Elaine Sanij, Ross D Hannan. Trends Mol Med 2013
156
4

Regulation of p53 translation and induction after DNA damage by ribosomal protein L26 and nucleolin.
Masatoshi Takagi, Michael J Absalon, Kevin G McLure, Michael B Kastan. Cell 2005
475
4

The dynamics of postmitotic reassembly of the nucleolus.
M Dundr, T Misteli, M O Olson. J Cell Biol 2000
196
4

Fundamental molecular mechanism for the cellular uptake of guanidinium-rich molecules.
Henry D Herce, Angel E Garcia, M Cristina Cardoso. J Am Chem Soc 2014
151
4

The plurifunctional nucleolus.
T Pederson. Nucleic Acids Res 1998
405
4


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.