A citation-based method for searching scientific literature

Jiangwei Zhang, Durga Nand Tripathi, Ji Jing, Angela Alexander, Jinhee Kim, Reid T Powell, Ruhee Dere, Jacqueline Tait-Mulder, Ji-Hoon Lee, Tanya T Paull, Raj K Pandita, Vijaya K Charaka, Tej K Pandita, Michael B Kastan, Cheryl Lyn Walker. Nat Cell Biol 2015
Times Cited: 249







List of co-cited articles
2186 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


NBR1 acts as an autophagy receptor for peroxisomes.
Elizabeth Deosaran, Kenneth B Larsen, Rong Hua, Graeme Sargent, Yuqing Wang, Sarah Kim, Trond Lamark, Miluska Jauregui, Kelsey Law, Jennifer Lippincott-Schwartz,[...]. J Cell Sci 2013
216
28

PEX2 is the E3 ubiquitin ligase required for pexophagy during starvation.
Graeme Sargent, Tim van Zutphen, Tatiana Shatseva, Ling Zhang, Valeria Di Giovanni, Robert Bandsma, Peter Kijun Kim. J Cell Biol 2016
95
26

ATM activation by oxidative stress.
Zhi Guo, Sergei Kozlov, Martin F Lavin, Maria D Person, Tanya T Paull. Science 2010
735
24

Mitochondrial dysfunction in ataxia-telangiectasia.
Yasmine A Valentin-Vega, Kirsteen H Maclean, Jacqueline Tait-Mulder, Sandra Milasta, Meredith Steeves, Frank C Dorsey, John L Cleveland, Douglas R Green, Michael B Kastan. Blood 2012
252
22

The ubiquitin kinase PINK1 recruits autophagy receptors to induce mitophagy.
Michael Lazarou, Danielle A Sliter, Lesley A Kane, Shireen A Sarraf, Chunxin Wang, Jonathon L Burman, Dionisia P Sideris, Adam I Fogel, Richard J Youle. Nature 2015
20

Regulation of endoplasmic reticulum turnover by selective autophagy.
Aliaksandr Khaminets, Theresa Heinrich, Muriel Mari, Paolo Grumati, Antje K Huebner, Masato Akutsu, Lutz Liebmann, Alexandra Stolz, Sandor Nietzsche, Nicole Koch,[...]. Nature 2015
474
19


Ubiquitin signals autophagic degradation of cytosolic proteins and peroxisomes.
Peter Kijun Kim, Dale Warren Hailey, Robert Thomas Mullen, Jennifer Lippincott-Schwartz. Proc Natl Acad Sci U S A 2008
395
18

The membrane peroxin PEX3 induces peroxisome-ubiquitination-linked pexophagy.
Shun-ichi Yamashita, Kakeru Abe, Yuki Tatemichi, Yukio Fujiki. Autophagy 2014
71
23

Cargo recognition and degradation by selective autophagy.
Damián Gatica, Vikramjit Lahiri, Daniel J Klionsky. Nat Cell Biol 2018
443
16

Mitochondrial outer-membrane protein FUNDC1 mediates hypoxia-induced mitophagy in mammalian cells.
Lei Liu, Du Feng, Guo Chen, Ming Chen, Qiaoxia Zheng, Pingping Song, Qi Ma, Chongzhuo Zhu, Rui Wang, Wanjun Qi,[...]. Nat Cell Biol 2012
842
16

ATM signals to TSC2 in the cytoplasm to regulate mTORC1 in response to ROS.
Angela Alexander, Sheng-Li Cai, Jinhee Kim, Adrian Nanez, Mustafa Sahin, Kirsteen H MacLean, Ken Inoki, Kun-Liang Guan, Jianjun Shen, Maria D Person,[...]. Proc Natl Acad Sci U S A 2010
492
16

The peroxisomal AAA ATPase complex prevents pexophagy and development of peroxisome biogenesis disorders.
Kelsey B Law, Dana Bronte-Tinkew, Erminia Di Pietro, Ann Snowden, Richard O Jones, Ann Moser, John H Brumell, Nancy Braverman, Peter K Kim. Autophagy 2017
53
30

Autophagy sequesters damaged lysosomes to control lysosomal biogenesis and kidney injury.
Ikuko Maejima, Atsushi Takahashi, Hiroko Omori, Tomonori Kimura, Yoshitsugu Takabatake, Tatsuya Saitoh, Akitsugu Yamamoto, Maho Hamasaki, Takeshi Noda, Yoshitaka Isaka,[...]. EMBO J 2013
290
15

A role for NBR1 in autophagosomal degradation of ubiquitinated substrates.
Vladimir Kirkin, Trond Lamark, Yu-Shin Sou, Geir Bjørkøy, Jennifer L Nunn, Jack-Ansgar Bruun, Elena Shvets, David G McEwan, Terje H Clausen, Philipp Wild,[...]. Mol Cell 2009
772
15

NUFIP1 is a ribosome receptor for starvation-induced ribophagy.
Gregory A Wyant, Monther Abu-Remaileh, Evgeni M Frenkel, Nouf N Laqtom, Vimisha Dharamdasani, Caroline A Lewis, Sze Ham Chan, Ivonne Heinze, Alessandro Ori, David M Sabatini. Science 2018
161
15

Full length RTN3 regulates turnover of tubular endoplasmic reticulum via selective autophagy.
Paolo Grumati, Giulio Morozzi, Soraya Hölper, Muriel Mari, Marie-Lena Ie Harwardt, Riqiang Yan, Stefan Müller, Fulvio Reggiori, Mike Heilemann, Ivan Dikic. Elife 2017
188
15

A tuberous sclerosis complex signalling node at the peroxisome regulates mTORC1 and autophagy in response to ROS.
Jiangwei Zhang, Jinhee Kim, Angela Alexander, Shengli Cai, Durga Nand Tripathi, Ruhee Dere, Andrew R Tee, Jacqueline Tait-Mulder, Alessia Di Nardo, Juliette M Han,[...]. Nat Cell Biol 2013
169
15

Nix is a selective autophagy receptor for mitochondrial clearance.
Ivana Novak, Vladimir Kirkin, David G McEwan, Ji Zhang, Philipp Wild, Alexis Rozenknop, Vladimir Rogov, Frank Löhr, Doris Popovic, Angelo Occhipinti,[...]. EMBO Rep 2010
807
14

Cardiolipin externalization to the outer mitochondrial membrane acts as an elimination signal for mitophagy in neuronal cells.
Charleen T Chu, Jing Ji, Ruben K Dagda, Jian Fei Jiang, Yulia Y Tyurina, Alexandr A Kapralov, Vladimir A Tyurin, Naveena Yanamala, Indira H Shrivastava, Dariush Mohammadyani,[...]. Nat Cell Biol 2013
562
14

Autophagy regulates lipid metabolism.
Rajat Singh, Susmita Kaushik, Yongjun Wang, Youqing Xiang, Inna Novak, Masaaki Komatsu, Keiji Tanaka, Ana Maria Cuervo, Mark J Czaja. Nature 2009
14

Receptor-mediated selective autophagy degrades the endoplasmic reticulum and the nucleus.
Keisuke Mochida, Yu Oikawa, Yayoi Kimura, Hiromi Kirisako, Hisashi Hirano, Yoshinori Ohsumi, Hitoshi Nakatogawa. Nature 2015
353
14

NAD+ Replenishment Improves Lifespan and Healthspan in Ataxia Telangiectasia Models via Mitophagy and DNA Repair.
Evandro Fei Fang, Henok Kassahun, Deborah L Croteau, Morten Scheibye-Knudsen, Krisztina Marosi, Huiming Lu, Raghavendra A Shamanna, Sumana Kalyanasundaram, Ravi Chand Bollineni, Mark A Wilson,[...]. Cell Metab 2016
251
14


Quantitative proteomics identifies NCOA4 as the cargo receptor mediating ferritinophagy.
Joseph D Mancias, Xiaoxu Wang, Steven P Gygi, J Wade Harper, Alec C Kimmelman. Nature 2014
608
13

Excess peroxisomes are degraded by autophagic machinery in mammals.
Jun-ichi Iwata, Junji Ezaki, Masaaki Komatsu, Sadaki Yokota, Takashi Ueno, Isei Tanida, Tomoki Chiba, Keiji Tanaka, Eiki Kominami. J Biol Chem 2006
183
13

Prohibitin 2 Is an Inner Mitochondrial Membrane Mitophagy Receptor.
Yongjie Wei, Wei-Chung Chiang, Rhea Sumpter, Prashant Mishra, Beth Levine. Cell 2017
363
13

Translocon component Sec62 acts in endoplasmic reticulum turnover during stress recovery.
Fiorenza Fumagalli, Julia Noack, Timothy J Bergmann, Eduardo Cebollero, Giorgia Brambilla Pisoni, Elisa Fasana, Ilaria Fregno, Carmela Galli, Marisa Loi, Tatiana Soldà,[...]. Nat Cell Biol 2016
206
13


CCPG1 Is a Non-canonical Autophagy Cargo Receptor Essential for ER-Phagy and Pancreatic ER Proteostasis.
Matthew D Smith, Margaret E Harley, Alain J Kemp, Jimi Wills, Martin Lee, Mark Arends, Alex von Kriegsheim, Christian Behrends, Simon Wilkinson. Dev Cell 2018
187
13

Cleaning House: Selective Autophagy of Organelles.
Allyson L Anding, Eric H Baehrecke. Dev Cell 2017
298
13

The coming of age of chaperone-mediated autophagy.
Susmita Kaushik, Ana Maria Cuervo. Nat Rev Mol Cell Biol 2018
432
13

Hif-2α promotes degradation of mammalian peroxisomes by selective autophagy.
Katharina M Walter, Miriam J Schönenberger, Martin Trötzmüller, Michael Horn, Hans-Peter Elsässer, Ann B Moser, Miriam S Lucas, Tobias Schwarz, Philipp A Gerber, Phyllis L Faust,[...]. Cell Metab 2014
88
14

Role of peroxisomes in ROS/RNS-metabolism: implications for human disease.
Marc Fransen, Marcus Nordgren, Bo Wang, Oksana Apanasets. Biochim Biophys Acta 2012
299
13

Catalase inhibition induces pexophagy through ROS accumulation.
Joon No Lee, Raghbendra Kumar Dutta, Yunash Maharjan, Zhi-Qiang Liu, Jae-Young Lim, Se-Jin Kim, Dong-Hyung Cho, Hong-Seob So, Seong-Kyu Choe, Raekil Park. Biochem Biophys Res Commun 2018
30
43

p62/SQSTM1 binds directly to Atg8/LC3 to facilitate degradation of ubiquitinated protein aggregates by autophagy.
Serhiy Pankiv, Terje Høyvarde Clausen, Trond Lamark, Andreas Brech, Jack-Ansgar Bruun, Heidi Outzen, Aud Øvervatn, Geir Bjørkøy, Terje Johansen. J Biol Chem 2007
12

Spatiotemporally controlled induction of autophagy-mediated lysosome turnover.
Yu-Hsien Hung, Lily Man-Wen Chen, Jin-Yi Yang, Wei Yuan Yang. Nat Commun 2013
154
12

ATL3 Is a Tubular ER-Phagy Receptor for GABARAP-Mediated Selective Autophagy.
Qingzhou Chen, Ya Xiao, Peiyuan Chai, Pengli Zheng, Junlin Teng, Jianguo Chen. Curr Biol 2019
106
12

Microtubule-associated protein 1 light chain 3 (LC3) interacts with Bnip3 protein to selectively remove endoplasmic reticulum and mitochondria via autophagy.
Rita A Hanna, Melissa N Quinsay, Amabel M Orogo, Kayla Giang, Shivaji Rikka, Åsa B Gustafsson. J Biol Chem 2012
411
12


Mechanisms of mitophagy.
Richard J Youle, Derek P Narendra. Nat Rev Mol Cell Biol 2011
12

Dual role of USP30 in controlling basal pexophagy and mitophagy.
Elena Marcassa, Andreas Kallinos, Jane Jardine, Emma V Rusilowicz-Jones, Aitor Martinez, Sandra Kuehl, Markus Islinger, Michael J Clague, Sylvie Urbé. EMBO Rep 2018
69
17

Human disorders of peroxisome metabolism and biogenesis.
Hans R Waterham, Sacha Ferdinandusse, Ronald J A Wanders. Biochim Biophys Acta 2016
181
12

ATM-CHK2-Beclin 1 axis promotes autophagy to maintain ROS homeostasis under oxidative stress.
Qi-Qiang Guo, Shan-Shan Wang, Shan-Shan Zhang, Hong-De Xu, Xiao-Man Li, Yi Guan, Fei Yi, Ting-Ting Zhou, Bo Jiang, Ning Bai,[...]. EMBO J 2020
36
33

Mechanisms of ATM Activation.
Tanya T Paull. Annu Rev Biochem 2015
261
12

ATM directs DNA damage responses and proteostasis via genetically separable pathways.
Ji-Hoon Lee, Michael R Mand, Chung-Hsuan Kao, Yi Zhou, Seung W Ryu, Alicia L Richards, Joshua J Coon, Tanya T Paull. Sci Signal 2018
49
24

ATM is activated by ATP depletion and modulates mitochondrial function through NRF1.
Hei-Man Chow, Aifang Cheng, Xuan Song, Mavis R Swerdel, Ronald P Hart, Karl Herrup. J Cell Biol 2019
27
44

ATM mediates spermidine-induced mitophagy via PINK1 and Parkin regulation in human fibroblasts.
Yongmei Qi, Qian Qiu, Xueyan Gu, Yihong Tian, Yingmei Zhang. Sci Rep 2016
59
20

Parkin is recruited selectively to impaired mitochondria and promotes their autophagy.
Derek Narendra, Atsushi Tanaka, Der-Fen Suen, Richard J Youle. J Cell Biol 2008
11



Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.