A citation-based method for searching scientific literature

Jinqiang Liu, Clinton Yu, Xichan Hu, Jin-Kwang Kim, Jan C Bierma, Hyun-Ik Jun, Scott D Rychnovsky, Lan Huang, Feng Qiao. Cell Rep 2015
Times Cited: 12







List of co-cited articles
145 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Fission yeast Pot1-Tpp1 protects telomeres and regulates telomere length.
Tomoichiro Miyoshi, Junko Kanoh, Motoki Saito, Fuyuki Ishikawa. Science 2008
163
50

Development of a novel cross-linking strategy for fast and accurate identification of cross-linked peptides of protein complexes.
Athit Kao, Chi-li Chiu, Danielle Vellucci, Yingying Yang, Vishal R Patel, Shenheng Guan, Arlo Randall, Pierre Baldi, Scott D Rychnovsky, Lan Huang. Mol Cell Proteomics 2011
210
50


Regulation of telomere length and function by a Myb-domain protein in fission yeast.
J P Cooper, E R Nimmo, R C Allshire, T R Cech. Nature 1997
426
41

Tpz1 controls a telomerase-nonextendible telomeric state and coordinates switching to an extendible state via Ccq1.
Hyun-Ik Jun, Jinqiang Liu, Heetae Jeong, Jin-Kwang Kim, Feng Qiao. Genes Dev 2013
27
41



Tel1ATM and Rad3ATR kinases promote Ccq1-Est1 interaction to maintain telomeres in fission yeast.
Bettina A Moser, Ya-Ting Chang, Jorgena Kosti, Toru M Nakamura. Nat Struct Mol Biol 2011
59
41

Finding the end: recruitment of telomerase to telomeres.
Jayakrishnan Nandakumar, Thomas R Cech. Nat Rev Mol Cell Biol 2013
235
41


Mapping the structural topology of the yeast 19S proteasomal regulatory particle using chemical cross-linking and probabilistic modeling.
Athit Kao, Arlo Randall, Yingying Yang, Vishal R Patel, Wynne Kandur, Shenheng Guan, Scott D Rychnovsky, Pierre Baldi, Lan Huang. Mol Cell Proteomics 2012
46
41

Developing new isotope-coded mass spectrometry-cleavable cross-linkers for elucidating protein structures.
Clinton Yu, Wynne Kandur, Athit Kao, Scott Rychnovsky, Lan Huang. Anal Chem 2014
31
41

A new in vivo cross-linking mass spectrometry platform to define protein-protein interactions in living cells.
Robyn M Kaake, Xiaorong Wang, Anthony Burke, Clinton Yu, Wynne Kandur, Yingying Yang, Eric J Novtisky, Tonya Second, Jicheng Duan, Athit Kao,[...]. Mol Cell Proteomics 2014
119
41

Proteome-wide profiling of protein assemblies by cross-linking mass spectrometry.
Fan Liu, Dirk T S Rijkers, Harm Post, Albert J R Heck. Nat Methods 2015
262
41



Telomerase catalytic subunit homologs from fission yeast and human.
T M Nakamura, G B Morin, K B Chapman, S L Weinrich, W H Andrews, J Lingner, C B Harley, T R Cech. Science 1997
33


Structural probing of a protein phosphatase 2A network by chemical cross-linking and mass spectrometry.
Franz Herzog, Abdullah Kahraman, Daniel Boehringer, Raymond Mak, Andreas Bracher, Thomas Walzthoeni, Alexander Leitner, Martin Beck, Franz-Ulrich Hartl, Nenad Ban,[...]. Science 2012
295
33

Gln40 deamidation blocks structural reconfiguration and activation of SCF ubiquitin ligase complex by Nedd8.
Clinton Yu, Haibin Mao, Eric J Novitsky, Xiaobo Tang, Scott D Rychnovsky, Ning Zheng, Lan Huang. Nat Commun 2015
29
33

Structural characterization by cross-linking reveals the detailed architecture of a coatomer-related heptameric module from the nuclear pore complex.
Yi Shi, Javier Fernandez-Martinez, Elina Tjioe, Riccardo Pellarin, Seung Joong Kim, Rosemary Williams, Dina Schneidman-Duhovny, Andrej Sali, Michael P Rout, Brian T Chait. Mol Cell Proteomics 2014
112
33

Developing an Acidic Residue Reactive and Sulfoxide-Containing MS-Cleavable Homobifunctional Cross-Linker for Probing Protein-Protein Interactions.
Craig B Gutierrez, Clinton Yu, Eric J Novitsky, Alexander S Huszagh, Scott D Rychnovsky, Lan Huang. Anal Chem 2016
36
33

Spatial Organization and Molecular Interactions of the Schizosaccharomyces pombe Ccq1-Tpz1-Poz1 Shelterin Complex.
Harry Scott, Jin-Kwang Kim, Clinton Yu, Lan Huang, Feng Qiao, Derek J Taylor. J Mol Biol 2017
7
57



Fission yeast Tel1(ATM) and Rad3(ATR) promote telomere protection and telomerase recruitment.
Bettina A Moser, Lakxmi Subramanian, Lyne Khair, Ya-Ting Chang, Toru M Nakamura. PLoS Genet 2009
46
25

Telomerase activation after recruitment in fission yeast.
Christine Anne Armstrong, Siân Rosanna Pearson, Hanna Amelina, Vera Moiseeva, Kazunori Tomita. Curr Biol 2014
21
25


The biogenesis and regulation of telomerase holoenzymes.
Kathleen Collins. Nat Rev Mol Cell Biol 2006
209
25

Heterologous modules for efficient and versatile PCR-based gene targeting in Schizosaccharomyces pombe.
J Bähler, J Q Wu, M S Longtine, N G Shah, A McKenzie, A B Steever, A Wach, P Philippsen, J R Pringle. Yeast 1998
25

Fission yeast Ccq1 is telomerase recruiter and local checkpoint controller.
Kazunori Tomita, Julia Promisel Cooper. Genes Dev 2008
74
25

How shelterin protects mammalian telomeres.
Wilhelm Palm, Titia de Lange. Annu Rev Genet 2008
25

Molecular architecture of photoreceptor phosphodiesterase elucidated by chemical cross-linking and integrative modeling.
Xiaohui Zeng-Elmore, Xiong-Zhuo Gao, Riccardo Pellarin, Dina Schneidman-Duhovny, Xiu-Jun Zhang, Katie A Kozacka, Yang Tang, Andrej Sali, Robert J Chalkley, Rick H Cote,[...]. J Mol Biol 2014
31
25

Ionic reagent for controlling the gas-phase fragmentation reactions of cross-linked peptides.
Yali Lu, Marina Tanasova, Babak Borhan, Gavin E Reid. Anal Chem 2008
50
25

Architecture of the RNA polymerase II-TFIIF complex revealed by cross-linking and mass spectrometry.
Zhuo Angel Chen, Anass Jawhari, Lutz Fischer, Claudia Buchen, Salman Tahir, Tomislav Kamenski, Morten Rasmussen, Laurent Lariviere, Jimi-Carlo Bukowski-Wills, Michael Nilges,[...]. EMBO J 2010
299
25

MS2Assign, automated assignment and nomenclature of tandem mass spectra of chemically crosslinked peptides.
Birgit Schilling, Richard H Row, Bradford W Gibson, Xin Guo, Malin M Young. J Am Soc Mass Spectrom 2003
209
25

Cleavable cross-linker for protein structure analysis: reliable identification of cross-linking products by tandem MS.
Mathias Q Müller, Frank Dreiocker, Christian H Ihling, Mathias Schäfer, Andrea Sinz. Anal Chem 2010
137
25

An isotopically coded CID-cleavable biotinylated cross-linker for structural proteomics.
Evgeniy V Petrotchenko, Jason J Serpa, Christoph H Borchers. Mol Cell Proteomics 2011
94
25

Molecular architecture of the 40S⋅eIF1⋅eIF3 translation initiation complex.
Jan P Erzberger, Florian Stengel, Riccardo Pellarin, Suyang Zhang, Tanja Schaefer, Christopher H S Aylett, Peter Cimermančič, Daniel Boehringer, Andrej Sali, Ruedi Aebersold,[...]. Cell 2014
148
25

Chemical cross-linking/mass spectrometry targeting acidic residues in proteins and protein complexes.
Alexander Leitner, Lukasz A Joachimiak, Pia Unverdorben, Thomas Walzthoeni, Judith Frydman, Friedrich Förster, Ruedi Aebersold. Proc Natl Acad Sci U S A 2014
138
25

Mass spectrometric characterization of the affinity-purified human 26S proteasome complex.
Xiaorong Wang, Chi-Fen Chen, Peter R Baker, Phang-lang Chen, Peter Kaiser, Lan Huang. Biochemistry 2007
181
25

Characterization of Dynamic UbR-Proteasome Subcomplexes by In vivo Cross-linking (X) Assisted Bimolecular Tandem Affinity Purification (XBAP) and Label-free Quantitation.
Clinton Yu, Yingying Yang, Xiaorong Wang, Shenheng Guan, Lei Fang, Fen Liu, Kylie J Walters, Peter Kaiser, Lan Huang. Mol Cell Proteomics 2016
22
25



Protein interactions, post-translational modifications and topologies in human cells.
Juan D Chavez, Chad R Weisbrod, Chunxiang Zheng, Jimmy K Eng, James E Bruce. Mol Cell Proteomics 2013
80
25

Quantitative interactome analysis reveals a chemoresistant edgotype.
Juan D Chavez, Devin K Schweppe, Jimmy K Eng, Chunxiang Zheng, Alex Taipale, Yiyi Zhang, Kohji Takara, James E Bruce. Nat Commun 2015
57
25

Telomeric strategies: means to an end.
Devanshi Jain, Julia Promisel Cooper. Annu Rev Genet 2010
145
25

The proper connection between shelterin components is required for telomeric heterochromatin assembly.
Jiyong Wang, Allison L Cohen, Anudari Letian, Xavier Tadeo, James J Moresco, Jinqiang Liu, John R Yates, Feng Qiao, Songtao Jia. Genes Dev 2016
31
25

Telomere length homeostasis is achieved via a switch between telomerase- extendible and -nonextendible states.
M Teresa Teixeira, Milica Arneric, Peter Sperisen, Joachim Lingner. Cell 2004
382
25



Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.