A citation-based method for searching scientific literature

Valentina Emiliani, Adam E Cohen, Karl Deisseroth, Michael Häusser. J Neurosci 2015
Times Cited: 162







List of co-cited articles
1295 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Ultrasensitive fluorescent proteins for imaging neuronal activity.
Tsai-Wen Chen, Trevor J Wardill, Yi Sun, Stefan R Pulver, Sabine L Renninger, Amy Baohan, Eric R Schreiter, Rex A Kerr, Michael B Orger, Vivek Jayaraman,[...]. Nature 2013
42

Simultaneous all-optical manipulation and recording of neural circuit activity with cellular resolution in vivo.
Adam M Packer, Lloyd E Russell, Henry W P Dalgleish, Michael Häusser. Nat Methods 2015
273
39

Millisecond-timescale, genetically targeted optical control of neural activity.
Edward S Boyden, Feng Zhang, Ernst Bamberg, Georg Nagel, Karl Deisseroth. Nat Neurosci 2005
25

Simultaneous cellular-resolution optical perturbation and imaging of place cell firing fields.
John Peter Rickgauer, Karl Deisseroth, David W Tank. Nat Neurosci 2014
186
25

Independent optical excitation of distinct neural populations.
Nathan C Klapoetke, Yasunobu Murata, Sung Soo Kim, Stefan R Pulver, Amanda Birdsey-Benson, Yong Ku Cho, Tania K Morimoto, Amy S Chuong, Eric J Carpenter, Zhijian Tian,[...]. Nat Methods 2014
964
25

Simultaneous two-photon imaging and two-photon optogenetics of cortical circuits in three dimensions.
Weijian Yang, Luis Carrillo-Reid, Yuki Bando, Darcy S Peterka, Rafael Yuste. Elife 2018
88
25

Sensitive red protein calcium indicators for imaging neural activity.
Hod Dana, Boaz Mohar, Yi Sun, Sujatha Narayan, Andrew Gordus, Jeremy P Hasseman, Getahun Tsegaye, Graham T Holt, Amy Hu, Deepika Walpita,[...]. Elife 2016
421
21

Cortical layer-specific critical dynamics triggering perception.
James H Marshel, Yoon Seok Kim, Timothy A Machado, Sean Quirin, Brandon Benson, Jonathan Kadmon, Cephra Raja, Adelaida Chibukhchyan, Charu Ramakrishnan, Masatoshi Inoue,[...]. Science 2019
150
21

Imaging calcium in neurons.
Christine Grienberger, Arthur Konnerth. Neuron 2012
626
20

Imprinting and recalling cortical ensembles.
Luis Carrillo-Reid, Weijian Yang, Yuki Bando, Darcy S Peterka, Rafael Yuste. Science 2016
120
20

Neocortical excitation/inhibition balance in information processing and social dysfunction.
Ofer Yizhar, Lief E Fenno, Matthias Prigge, Franziska Schneider, Thomas J Davidson, Daniel J O'Shea, Vikaas S Sohal, Inbal Goshen, Joel Finkelstein, Jeanne T Paz,[...]. Nature 2011
17


All-optical electrophysiology in mammalian neurons using engineered microbial rhodopsins.
Daniel R Hochbaum, Yongxin Zhao, Samouil L Farhi, Nathan Klapoetke, Christopher A Werley, Vikrant Kapoor, Peng Zou, Joel M Kralj, Dougal Maclaurin, Niklas Smedemark-Margulies,[...]. Nat Methods 2014
405
17

Two-Photon Bidirectional Control and Imaging of Neuronal Excitability with High Spatial Resolution In Vivo.
Angelo Forli, Dania Vecchia, Noemi Binini, Francesca Succol, Serena Bovetti, Claudio Moretti, Francesco Nespoli, Mathias Mahn, Christopher A Baker, McLean M Bolton,[...]. Cell Rep 2018
77
22

Precise multimodal optical control of neural ensemble activity.
Alan R Mardinly, Ian Antón Oldenburg, Nicolas C Pégard, Savitha Sridharan, Evan H Lyall, Kirill Chesnov, Stephen G Brohawn, Laura Waller, Hillel Adesnik. Nat Neurosci 2018
86
19

Closed-loop all-optical interrogation of neural circuits in vivo.
Zihui Zhang, Lloyd E Russell, Adam M Packer, Oliver M Gauld, Michael Häusser. Nat Methods 2018
53
32

Temporally precise single-cell-resolution optogenetics.
Or A Shemesh, Dimitrii Tanese, Valeria Zampini, Changyang Linghu, Kiryl Piatkevich, Emiliano Ronzitti, Eirini Papagiakoumou, Edward S Boyden, Valentina Emiliani. Nat Neurosci 2017
93
17

Scanless two-photon excitation of channelrhodopsin-2.
Eirini Papagiakoumou, Francesca Anselmi, Aurélien Bègue, Vincent de Sars, Jesper Glückstad, Ehud Y Isacoff, Valentina Emiliani. Nat Methods 2010
223
16

Controlling Visually Guided Behavior by Holographic Recalling of Cortical Ensembles.
Luis Carrillo-Reid, Shuting Han, Weijian Yang, Alejandro Akrouh, Rafael Yuste. Cell 2019
96
16

A large field of view two-photon mesoscope with subcellular resolution for in vivo imaging.
Nicholas James Sofroniew, Daniel Flickinger, Jonathan King, Karel Svoboda. Elife 2016
241
15

Cellular resolution circuit mapping with temporal-focused excitation of soma-targeted channelrhodopsin.
Christopher A Baker, Yishai M Elyada, Andres Parra, M McLean Bolton. Elife 2016
68
22

Three-dimensional scanless holographic optogenetics with temporal focusing (3D-SHOT).
Nicolas C Pégard, Alan R Mardinly, Ian Antón Oldenburg, Savitha Sridharan, Laura Waller, Hillel Adesnik. Nat Commun 2017
65
23

Two-photon excitation of channelrhodopsin-2 at saturation.
John Peter Rickgauer, David W Tank. Proc Natl Acad Sci U S A 2009
161
15

Two-photon optogenetic toolbox for fast inhibition, excitation and bistable modulation.
Rohit Prakash, Ofer Yizhar, Benjamin Grewe, Charu Ramakrishnan, Nancy Wang, Inbal Goshen, Adam M Packer, Darcy S Peterka, Rafael Yuste, Mark J Schnitzer,[...]. Nat Methods 2012
186
15

Submillisecond Optogenetic Control of Neuronal Firing with Two-Photon Holographic Photoactivation of Chronos.
Emiliano Ronzitti, Rossella Conti, Valeria Zampini, Dimitrii Tanese, Amanda J Foust, Nathan Klapoetke, Edward S Boyden, Eirini Papagiakoumou, Valentina Emiliani. J Neurosci 2017
55
27

Optogenetics in neural systems.
Ofer Yizhar, Lief E Fenno, Thomas J Davidson, Murtaza Mogri, Karl Deisseroth. Neuron 2011
14

Deep tissue two-photon microscopy.
Fritjof Helmchen, Winfried Denk. Nat Methods 2005
14

Two-photon optogenetics of dendritic spines and neural circuits.
Adam M Packer, Darcy S Peterka, Jan J Hirtz, Rohit Prakash, Karl Deisseroth, Rafael Yuste. Nat Methods 2012
149
14

Genetically encoded indicators of neuronal activity.
Michael Z Lin, Mark J Schnitzer. Nat Neurosci 2016
312
14

High-performance calcium sensors for imaging activity in neuronal populations and microcompartments.
Hod Dana, Yi Sun, Boaz Mohar, Brad K Hulse, Aaron M Kerlin, Jeremy P Hasseman, Getahun Tsegaye, Arthur Tsang, Allan Wong, Ronak Patel,[...]. Nat Methods 2019
289
14

Three-dimensional spatiotemporal focusing of holographic patterns.
Oscar Hernandez, Eirini Papagiakoumou, Dimitrii Tanese, Kevin Fidelin, Claire Wyart, Valentina Emiliani. Nat Commun 2016
59
22

Two-photon laser scanning fluorescence microscopy.
W Denk, J H Strickler, W W Webb. Science 1990
13

Spatially selective holographic photoactivation and functional fluorescence imaging in freely behaving mice with a fiberscope.
Vivien Szabo, Cathie Ventalon, Vincent De Sars, Jonathan Bradley, Valentina Emiliani. Neuron 2014
83
15

Genetically encoded calcium indicators for multi-color neural activity imaging and combination with optogenetics.
Jasper Akerboom, Nicole Carreras Calderón, Lin Tian, Sebastian Wabnig, Matthias Prigge, Johan Tolö, Andrew Gordus, Michael B Orger, Kristen E Severi, John J Macklin,[...]. Front Mol Neurosci 2013
420
13

Channelrhodopsin-2, a directly light-gated cation-selective membrane channel.
Georg Nagel, Tanjef Szellas, Wolfram Huhn, Suneel Kateriya, Nona Adeishvili, Peter Berthold, Doris Ollig, Peter Hegemann, Ernst Bamberg. Proc Natl Acad Sci U S A 2003
11

ReaChR: a red-shifted variant of channelrhodopsin enables deep transcranial optogenetic excitation.
John Y Lin, Per Magne Knutsen, Arnaud Muller, David Kleinfeld, Roger Y Tsien. Nat Neurosci 2013
442
11

Imaging neural activity in worms, flies and mice with improved GCaMP calcium indicators.
Lin Tian, S Andrew Hires, Tianyi Mao, Daniel Huber, M Eugenia Chiappe, Sreekanth H Chalasani, Leopoldo Petreanu, Jasper Akerboom, Sean A McKinney, Eric R Schreiter,[...]. Nat Methods 2009
11

Linking Neurons to Network Function and Behavior by Two-Photon Holographic Optogenetics and Volumetric Imaging.
Marco Dal Maschio, Joseph C Donovan, Thomas O Helmbrecht, Herwig Baier. Neuron 2017
72
15

High-speed recording of neural spikes in awake mice and flies with a fluorescent voltage sensor.
Yiyang Gong, Cheng Huang, Jin Zhong Li, Benjamin F Grewe, Yanping Zhang, Stephan Eismann, Mark J Schnitzer. Science 2015
243
11


Integration of optogenetics with complementary methodologies in systems neuroscience.
Christina K Kim, Avishek Adhikari, Karl Deisseroth. Nat Rev Neurosci 2017
305
11

Single-neuron perturbations reveal feature-specific competition in V1.
Selmaan N Chettih, Christopher D Harvey. Nature 2019
66
16

High-fidelity optical reporting of neuronal electrical activity with an ultrafast fluorescent voltage sensor.
François St-Pierre, Jesse D Marshall, Ying Yang, Yiyang Gong, Mark J Schnitzer, Michael Z Lin. Nat Neurosci 2014
262
10

Transgenic mice for intersectional targeting of neural sensors and effectors with high specificity and performance.
Linda Madisen, Aleena R Garner, Daisuke Shimaoka, Amy S Chuong, Nathan C Klapoetke, Lu Li, Alexander van der Bourg, Yusuke Niino, Ladan Egolf, Claudio Monetti,[...]. Neuron 2015
529
10

Principles for applying optogenetic tools derived from direct comparative analysis of microbial opsins.
Joanna Mattis, Kay M Tye, Emily A Ferenczi, Charu Ramakrishnan, Daniel J O'Shea, Rohit Prakash, Lisa A Gunaydin, Minsuk Hyun, Lief E Fenno, Viviana Gradinaru,[...]. Nat Methods 2011
447
10

Simultaneous Denoising, Deconvolution, and Demixing of Calcium Imaging Data.
Eftychios A Pnevmatikakis, Daniel Soudry, Yuanjun Gao, Timothy A Machado, Josh Merel, David Pfau, Thomas Reardon, Yu Mu, Clay Lacefield, Weijian Yang,[...]. Neuron 2016
371
10

Brain heating induced by near-infrared lasers during multiphoton microscopy.
Kaspar Podgorski, Gayathri Ranganathan. J Neurophysiol 2016
108
10

Imaging voltage in neurons.
Darcy S Peterka, Hiroto Takahashi, Rafael Yuste. Neuron 2011
212
10

Bright and photostable chemigenetic indicators for extended in vivo voltage imaging.
Ahmed S Abdelfattah, Takashi Kawashima, Amrita Singh, Ondrej Novak, Hui Liu, Yichun Shuai, Yi-Chieh Huang, Luke Campagnola, Stephanie C Seeman, Jianing Yu,[...]. Science 2019
163
10

Noninvasive optical inhibition with a red-shifted microbial rhodopsin.
Amy S Chuong, Mitra L Miri, Volker Busskamp, Gillian A C Matthews, Leah C Acker, Andreas T Sørensen, Andrew Young, Nathan C Klapoetke, Mike A Henninger, Suhasa B Kodandaramaiah,[...]. Nat Neurosci 2014
281
9


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.