A citation-based method for searching scientific literature

Xing Guo, Xiaorong Wang, Zhiping Wang, Sourav Banerjee, Jing Yang, Lan Huang, Jack E Dixon. Nat Cell Biol 2016
Times Cited: 104







List of co-cited articles
1283 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


cAMP-induced phosphorylation of 26S proteasomes on Rpn6/PSMD11 enhances their activity and the degradation of misfolded proteins.
Sudarsanareddy Lokireddy, Nikolay Vadimovich Kukushkin, Alfred Lewis Goldberg. Proc Natl Acad Sci U S A 2015
149
41

The Logic of the 26S Proteasome.
Galen Andrew Collins, Alfred L Goldberg. Cell 2017
426
40

Tau-driven 26S proteasome impairment and cognitive dysfunction can be prevented early in disease by activating cAMP-PKA signaling.
Natura Myeku, Catherine L Clelland, Sheina Emrani, Nikolay V Kukushkin, Wai Haung Yu, Alfred L Goldberg, Karen E Duff. Nat Med 2016
251
29


Reversible phosphorylation of the 26S proteasome.
Xing Guo, Xiuliang Huang, Mark J Chen. Protein Cell 2017
48
47

Regulating protein breakdown through proteasome phosphorylation.
Jordan J S VerPlank, Alfred L Goldberg. Biochem J 2017
70
32

Ancient drug curcumin impedes 26S proteasome activity by direct inhibition of dual-specificity tyrosine-regulated kinase 2.
Sourav Banerjee, Chenggong Ji, Joshua E Mayfield, Apollina Goel, Junyu Xiao, Jack E Dixon, Xing Guo. Proc Natl Acad Sci U S A 2018
70
32

Enhancement of proteasome activity by a small-molecule inhibitor of USP14.
Byung-Hoon Lee, Min Jae Lee, Soyeon Park, Dong-Chan Oh, Suzanne Elsasser, Ping-Chung Chen, Carlos Gartner, Nevena Dimova, John Hanna, Steven P Gygi,[...]. Nature 2010
672
21

Regulation of the proteasome by neuronal activity and calcium/calmodulin-dependent protein kinase II.
Stevan N Djakovic, Lindsay A Schwarz, Barbara Barylko, George N DeMartino, Gentry N Patrick. J Biol Chem 2009
167
20

Proteasome function is regulated by cyclic AMP-dependent protein kinase through phosphorylation of Rpt6.
Fengxue Zhang, Yong Hu, Ping Huang, Clifford A Toleman, Andrew J Paterson, Jeffrey E Kudlow. J Biol Chem 2007
151
18

Autoubiquitination of the 26S proteasome on Rpn13 regulates breakdown of ubiquitin conjugates.
Henrike C Besche, Zhe Sha, Nikolay V Kukushkin, Andreas Peth, Eva-Maria Hock, Woong Kim, Steven Gygi, Juan A Gutierrez, Hua Liao, Lawrence Dick,[...]. EMBO J 2014
116
17

26S Proteasomes are rapidly activated by diverse hormones and physiological states that raise cAMP and cause Rpn6 phosphorylation.
Jordan J S VerPlank, Sudarsanareddy Lokireddy, Jinghui Zhao, Alfred L Goldberg. Proc Natl Acad Sci U S A 2019
59
28

Gates, Channels, and Switches: Elements of the Proteasome Machine.
Daniel Finley, Xiang Chen, Kylie J Walters. Trends Biochem Sci 2016
174
16

Rpn1 provides adjacent receptor sites for substrate binding and deubiquitination by the proteasome.
Yuan Shi, Xiang Chen, Suzanne Elsasser, Bradley B Stocks, Geng Tian, Byung-Hoon Lee, Yanhong Shi, Naixia Zhang, Stefanie A H de Poot, Fabian Tuebing,[...]. Science 2016
171
16

Proteasomes. A molecular census of 26S proteasomes in intact neurons.
Shoh Asano, Yoshiyuki Fukuda, Florian Beck, Antje Aufderheide, Friedrich Förster, Radostin Danev, Wolfgang Baumeister. Science 2015
208
16

Autophosphorylated CaMKIIalpha acts as a scaffold to recruit proteasomes to dendritic spines.
Baris Bingol, Chi-Fong Wang, David Arnott, Dongmei Cheng, Junmin Peng, Morgan Sheng. Cell 2010
210
15

Protein kinase g positively regulates proteasome-mediated degradation of misfolded proteins.
Mark J Ranek, Erin J M Terpstra, Jie Li, David A Kass, Xuejun Wang. Circulation 2013
89
16


An atomic structure of the human 26S proteasome.
Xiuliang Huang, Bai Luan, Jianping Wu, Yigong Shi. Nat Struct Mol Biol 2016
143
13

Phosphorylation of Rpt6 regulates synaptic strength in hippocampal neurons.
Stevan N Djakovic, Esther M Marquez-Lona, Sonya K Jakawich, Rebecca Wright, Carissa Chu, Michael A Sutton, Gentry N Patrick. J Neurosci 2012
89
14

Conformational switching of the 26S proteasome enables substrate degradation.
Mary E Matyskiela, Gabriel C Lander, Andreas Martin. Nat Struct Mol Biol 2013
177
13

Transcription factor Nrf1 mediates the proteasome recovery pathway after proteasome inhibition in mammalian cells.
Senthil K Radhakrishnan, Candy S Lee, Patrick Young, Anne Beskow, Jefferson Y Chan, Raymond J Deshaies. Mol Cell 2010
335
13

DYRK2 is targeted to the nucleus and controls p53 via Ser46 phosphorylation in the apoptotic response to DNA damage.
Naoe Taira, Keishi Nihira, Tomoko Yamaguchi, Yoshio Miki, Kiyotsugu Yoshida. Mol Cell 2007
210
13


Docking of the proteasomal ATPases' carboxyl termini in the 20S proteasome's alpha ring opens the gate for substrate entry.
David M Smith, Shih-Chung Chang, Soyeon Park, Daniel Finley, Yifan Cheng, Alfred L Goldberg. Mol Cell 2007
375
12

Mass spectrometric characterization of the affinity-purified human 26S proteasome complex.
Xiaorong Wang, Chi-Fen Chen, Peter R Baker, Phang-lang Chen, Peter Kaiser, Lan Huang. Biochemistry 2007
188
12

Regulation of proteasome activity in health and disease.
Marion Schmidt, Daniel Finley. Biochim Biophys Acta 2014
295
12

USP14 deubiquitinates proteasome-bound substrates that are ubiquitinated at multiple sites.
Byung-Hoon Lee, Ying Lu, Miguel A Prado, Yuan Shi, Geng Tian, Shuangwu Sun, Suzanne Elsasser, Steven P Gygi, Randall W King, Daniel Finley. Nature 2016
125
12

mTOR inhibition activates overall protein degradation by the ubiquitin proteasome system as well as by autophagy.
Jinghui Zhao, Bo Zhai, Steven P Gygi, Alfred Lewis Goldberg. Proc Natl Acad Sci U S A 2015
259
12

Inhibition of dual-specificity tyrosine phosphorylation-regulated kinase 2 perturbs 26S proteasome-addicted neoplastic progression.
Sourav Banerjee, Tiantian Wei, Jue Wang, Jenna J Lee, Haydee L Gutierrez, Owen Chapman, Sandra E Wiley, Joshua E Mayfield, Vasudha Tandon, Edwin F Juarez,[...]. Proc Natl Acad Sci U S A 2019
24
50

UBLCP1 is a 26S proteasome phosphatase that regulates nuclear proteasome activity.
Xing Guo, James L Engel, Junyu Xiao, Vincent S Tagliabracci, Xiaorong Wang, Lan Huang, Jack E Dixon. Proc Natl Acad Sci U S A 2011
55
20

CaMKII, but not protein kinase A, regulates Rpt6 phosphorylation and proteasome activity during the formation of long-term memories.
Timothy J Jarome, Janine L Kwapis, Wendy L Ruenzel, Fred J Helmstetter. Front Behav Neurosci 2013
70
15

Osmotic stress inhibits proteasome by p38 MAPK-dependent phosphorylation.
Seung-Hoon Lee, Yoon Park, Sungjoo Kim Yoon, Jong-Bok Yoon. J Biol Chem 2010
52
21

Role of Rpn11 metalloprotease in deubiquitination and degradation by the 26S proteasome.
Rati Verma, L Aravind, Robert Oania, W Hayes McDonald, John R Yates, Eugene V Koonin, Raymond J Deshaies. Science 2002
778
11

Complete subunit architecture of the proteasome regulatory particle.
Gabriel C Lander, Eric Estrin, Mary E Matyskiela, Charlene Bashore, Eva Nogales, Andreas Martin. Nature 2012
450
11



Structure and Function of the 26S Proteasome.
Jared A M Bard, Ellen A Goodall, Eric R Greene, Erik Jonsson, Ken C Dong, Andreas Martin. Annu Rev Biochem 2018
309
11

Structural basis for dynamic regulation of the human 26S proteasome.
Shuobing Chen, Jiayi Wu, Ying Lu, Yong-Bei Ma, Byung-Hoon Lee, Zhou Yu, Qi Ouyang, Daniel J Finley, Marc W Kirschner, Youdong Mao. Proc Natl Acad Sci U S A 2016
105
10

Molecular mechanisms of proteasome assembly.
Shigeo Murata, Hideki Yashiroda, Keiji Tanaka. Nat Rev Mol Cell Biol 2009
376
10

PKA rapidly enhances proteasome assembly and activity in in vivo canine hearts.
Mitsutoshi Asai, Osamu Tsukamoto, Tetsuo Minamino, Hiroshi Asanuma, Masashi Fujita, Yoshihiro Asano, Hiroyuki Takahama, Hideyuki Sasaki, Shuichiro Higo, Masanori Asakura,[...]. J Mol Cell Cardiol 2009
75
13

Proteasome subunit Rpn13 is a novel ubiquitin receptor.
Koraljka Husnjak, Suzanne Elsasser, Naixia Zhang, Xiang Chen, Leah Randles, Yuan Shi, Kay Hofmann, Kylie J Walters, Daniel Finley, Ivan Dikic. Nature 2008
469
10

Ubiquitin chains are remodeled at the proteasome by opposing ubiquitin ligase and deubiquitinating activities.
Bernat Crosas, John Hanna, Donald S Kirkpatrick, Dan Phoebe Zhang, Yoshiko Tone, Nathaniel A Hathaway, Christa Buecker, David S Leggett, Marion Schmidt, Randall W King,[...]. Cell 2006
240
10

Multiple associated proteins regulate proteasome structure and function.
David S Leggett, John Hanna, Anna Borodovsky, Bernat Crosas, Marion Schmidt, Rohan T Baker, Thomas Walz, Hidde Ploegh, Daniel Finley. Mol Cell 2002
486
10

The ATP costs and time required to degrade ubiquitinated proteins by the 26 S proteasome.
Andreas Peth, James A Nathan, Alfred L Goldberg. J Biol Chem 2013
89
11

Muscle wasting in disease: molecular mechanisms and promising therapies.
Shenhav Cohen, James A Nathan, Alfred L Goldberg. Nat Rev Drug Discov 2015
577
10

Increased proteasome activity in human embryonic stem cells is regulated by PSMD11.
David Vilchez, Leah Boyer, Ianessa Morantte, Margaret Lutz, Carsten Merkwirth, Derek Joyce, Brian Spencer, Lesley Page, Eliezer Masliah, W Travis Berggren,[...]. Nature 2012
272
10

DYRK2 controls the epithelial-mesenchymal transition in breast cancer by degrading Snail.
Rei Mimoto, Naoe Taira, Hiroyuki Takahashi, Tomoko Yamaguchi, Masataka Okabe, Ken Uchida, Yoshio Miki, Kiyotsugu Yoshida. Cancer Lett 2013
53
18

DYRK2 priming phosphorylation of c-Jun and c-Myc modulates cell cycle progression in human cancer cells.
Naoe Taira, Rei Mimoto, Morito Kurata, Tomoko Yamaguchi, Masanobu Kitagawa, Yoshio Miki, Kiyotsugu Yoshida. J Clin Invest 2012
94
10

Impairment of protein degradation and proteasome function in hereditary neuropathies.
Jordan J S VerPlank, Sudarsanareddy Lokireddy, M Laura Feltri, Alfred L Goldberg, Lawrence Wrabetz. Glia 2018
21
47


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.