Anne Lafon, Surayya Taranum, Federico Pietrocola, Florent Dingli, Damarys Loew, Sandipan Brahma, Blaine Bartholomew, Manolis Papamichos-Chronakis. Mol Cell 2015
Times Cited: 46
Times Cited: 46
Times Cited
Times Co-cited
Similarity
Mec1, INO80, and the PAF1 complex cooperate to limit transcription replication conflicts through RNAPII removal during replication stress.
Jérôme Poli, Christian-Benedikt Gerhold, Alessandro Tosi, Nicole Hustedt, Andrew Seeber, Ragna Sack, Franz Herzog, Philippe Pasero, Kenji Shimada, Karl-Peter Hopfner,[...]. Genes Dev 2016
Jérôme Poli, Christian-Benedikt Gerhold, Alessandro Tosi, Nicole Hustedt, Andrew Seeber, Ragna Sack, Franz Herzog, Philippe Pasero, Kenji Shimada, Karl-Peter Hopfner,[...]. Genes Dev 2016
47
Cdc48/p97 mediates UV-dependent turnover of RNA Pol II.
Rati Verma, Robert Oania, Ruihua Fang, Geoffrey T Smith, Raymond J Deshaies. Mol Cell 2011
Rati Verma, Robert Oania, Ruihua Fang, Geoffrey T Smith, Raymond J Deshaies. Mol Cell 2011
26
Global regulation of H2A.Z localization by the INO80 chromatin-remodeling enzyme is essential for genome integrity.
Manolis Papamichos-Chronakis, Shinya Watanabe, Oliver J Rando, Craig L Peterson. Cell 2011
Manolis Papamichos-Chronakis, Shinya Watanabe, Oliver J Rando, Craig L Peterson. Cell 2011
26
SWR-C and INO80 chromatin remodelers recognize nucleosome-free regions near +1 nucleosomes.
Kuangyu Yen, Vinesh Vinayachandran, B Franklin Pugh. Cell 2013
Kuangyu Yen, Vinesh Vinayachandran, B Franklin Pugh. Cell 2013
23
The biology of chromatin remodeling complexes.
Cedric R Clapier, Bradley R Cairns. Annu Rev Biochem 2009
Cedric R Clapier, Bradley R Cairns. Annu Rev Biochem 2009
23
The Ino80 complex prevents invasion of euchromatin into silent chromatin.
Yong Xue, Christopher Van, Suman K Pradhan, Trent Su, Jason Gehrke, Benjamin G Kuryan, Tasuku Kitada, Ajay Vashisht, Nancy Tran, James Wohlschlegel,[...]. Genes Dev 2015
Yong Xue, Christopher Van, Suman K Pradhan, Trent Su, Jason Gehrke, Benjamin G Kuryan, Tasuku Kitada, Ajay Vashisht, Nancy Tran, James Wohlschlegel,[...]. Genes Dev 2015
28
Rsp5 ubiquitin-protein ligase mediates DNA damage-induced degradation of the large subunit of RNA polymerase II in Saccharomyces cerevisiae.
S L Beaudenon, M R Huacani, G Wang, D P McDonnell, J M Huibregtse. Mol Cell Biol 1999
S L Beaudenon, M R Huacani, G Wang, D P McDonnell, J M Huibregtse. Mol Cell Biol 1999
19
Ubiquitylation and degradation of elongating RNA polymerase II: the last resort.
Marcus D Wilson, Michelle Harreman, Jesper Q Svejstrup. Biochim Biophys Acta 2013
Marcus D Wilson, Michelle Harreman, Jesper Q Svejstrup. Biochim Biophys Acta 2013
19
The INO80 remodeller in transcription, replication and repair.
Jérôme Poli, Susan M Gasser, Manolis Papamichos-Chronakis. Philos Trans R Soc Lond B Biol Sci 2017
Jérôme Poli, Susan M Gasser, Manolis Papamichos-Chronakis. Philos Trans R Soc Lond B Biol Sci 2017
19
Distinct ubiquitin ligases act sequentially for RNA polymerase II polyubiquitylation.
Michelle Harreman, Michael Taschner, Stefan Sigurdsson, Roy Anindya, James Reid, Baggavalli Somesh, Stephanie E Kong, Charles A S Banks, Ronald C Conaway, Joan W Conaway,[...]. Proc Natl Acad Sci U S A 2009
Michelle Harreman, Michael Taschner, Stefan Sigurdsson, Roy Anindya, James Reid, Baggavalli Somesh, Stephanie E Kong, Charles A S Banks, Ronald C Conaway, Joan W Conaway,[...]. Proc Natl Acad Sci U S A 2009
17
A Rad26-Def1 complex coordinates repair and RNA pol II proteolysis in response to DNA damage.
Elies C Woudstra, Chris Gilbert, Jane Fellows, Lars Jansen, Jaap Brouwer, Hediye Erdjument-Bromage, Paul Tempst, Jesper Q Svejstrup. Nature 2002
Elies C Woudstra, Chris Gilbert, Jane Fellows, Lars Jansen, Jaap Brouwer, Hediye Erdjument-Bromage, Paul Tempst, Jesper Q Svejstrup. Nature 2002
17
Ino80 chromatin remodeling complex promotes recovery of stalled replication forks.
Kenji Shimada, Yukako Oma, Thomas Schleker, Kazuto Kugou, Kunihiro Ohta, Masahiko Harata, Susan M Gasser. Curr Biol 2008
Kenji Shimada, Yukako Oma, Thomas Schleker, Kazuto Kugou, Kunihiro Ohta, Masahiko Harata, Susan M Gasser. Curr Biol 2008
17
ELA1 and CUL3 are required along with ELC1 for RNA polymerase II polyubiquitylation and degradation in DNA-damaged yeast cells.
Balazs Ribar, Louise Prakash, Satya Prakash. Mol Cell Biol 2007
Balazs Ribar, Louise Prakash, Satya Prakash. Mol Cell Biol 2007
17
Subunit organization of the human INO80 chromatin remodeling complex: an evolutionarily conserved core complex catalyzes ATP-dependent nucleosome remodeling.
Lu Chen, Yong Cai, Jingji Jin, Laurence Florens, Selene K Swanson, Michael P Washburn, Joan Weliky Conaway, Ronald C Conaway. J Biol Chem 2011
Lu Chen, Yong Cai, Jingji Jin, Laurence Florens, Selene K Swanson, Michael P Washburn, Joan Weliky Conaway, Ronald C Conaway. J Biol Chem 2011
17
Senataxin associates with replication forks to protect fork integrity across RNA-polymerase-II-transcribed genes.
Amaya Alzu, Rodrigo Bermejo, Martina Begnis, Chiara Lucca, Daniele Piccini, Walter Carotenuto, Marco Saponaro, Alessandra Brambati, Andrea Cocito, Marco Foiani,[...]. Cell 2012
Amaya Alzu, Rodrigo Bermejo, Martina Begnis, Chiara Lucca, Daniele Piccini, Walter Carotenuto, Marco Saponaro, Alessandra Brambati, Andrea Cocito, Marco Foiani,[...]. Cell 2012
15
Structure and subunit topology of the INO80 chromatin remodeler and its nucleosome complex.
Alessandro Tosi, Caroline Haas, Franz Herzog, Andrea Gilmozzi, Otto Berninghausen, Charlotte Ungewickell, Christian B Gerhold, Kristina Lakomek, Ruedi Aebersold, Roland Beckmann,[...]. Cell 2013
Alessandro Tosi, Caroline Haas, Franz Herzog, Andrea Gilmozzi, Otto Berninghausen, Charlotte Ungewickell, Christian B Gerhold, Kristina Lakomek, Ruedi Aebersold, Roland Beckmann,[...]. Cell 2013
15
Damage-induced ubiquitylation of human RNA polymerase II by the ubiquitin ligase Nedd4, but not Cockayne syndrome proteins or BRCA1.
Roy Anindya, Ozan Aygün, Jesper Q Svejstrup. Mol Cell 2007
Roy Anindya, Ozan Aygün, Jesper Q Svejstrup. Mol Cell 2007
15
Recruitment of the INO80 complex by H2A phosphorylation links ATP-dependent chromatin remodeling with DNA double-strand break repair.
Haico van Attikum, Olivier Fritsch, Barbara Hohn, Susan M Gasser. Cell 2004
Haico van Attikum, Olivier Fritsch, Barbara Hohn, Susan M Gasser. Cell 2004
15
The INO80 ATP-dependent chromatin remodeling complex is a nucleosome spacing factor.
Maheshi Udugama, Abdellah Sabri, Blaine Bartholomew. Mol Cell Biol 2011
Maheshi Udugama, Abdellah Sabri, Blaine Bartholomew. Mol Cell Biol 2011
15
Genomic Nucleosome Organization Reconstituted with Pure Proteins.
Nils Krietenstein, Megha Wal, Shinya Watanabe, Bongsoo Park, Craig L Peterson, B Franklin Pugh, Philipp Korber. Cell 2016
Nils Krietenstein, Megha Wal, Shinya Watanabe, Bongsoo Park, Craig L Peterson, B Franklin Pugh, Philipp Korber. Cell 2016
15
Topoisomerase I suppresses genomic instability by preventing interference between replication and transcription.
Sandie Tuduri, Laure Crabbé, Chiara Conti, Hélène Tourrière, Heidi Holtgreve-Grez, Anna Jauch, Véronique Pantesco, John De Vos, Aubin Thomas, Charles Theillet,[...]. Nat Cell Biol 2009
Sandie Tuduri, Laure Crabbé, Chiara Conti, Hélène Tourrière, Heidi Holtgreve-Grez, Anna Jauch, Véronique Pantesco, John De Vos, Aubin Thomas, Charles Theillet,[...]. Nat Cell Biol 2009
13
Multiple mechanisms confining RNA polymerase II ubiquitylation to polymerases undergoing transcriptional arrest.
Baggavalli P Somesh, James Reid, Wei-Feng Liu, T Max M Søgaard, Hediye Erdjument-Bromage, Paul Tempst, Jesper Q Svejstrup. Cell 2005
Baggavalli P Somesh, James Reid, Wei-Feng Liu, T Max M Søgaard, Hediye Erdjument-Bromage, Paul Tempst, Jesper Q Svejstrup. Cell 2005
13
A chromatin remodelling complex involved in transcription and DNA processing.
X Shen, G Mizuguchi, A Hamiche, C Wu. Nature 2000
X Shen, G Mizuguchi, A Hamiche, C Wu. Nature 2000
13
ATP-dependent chromatin remodeling shapes the long noncoding RNA landscape.
Eric A Alcid, Toshio Tsukiyama. Genes Dev 2014
Eric A Alcid, Toshio Tsukiyama. Genes Dev 2014
18
The Ino80 chromatin-remodeling enzyme regulates replisome function and stability.
Manolis Papamichos-Chronakis, Craig L Peterson. Nat Struct Mol Biol 2008
Manolis Papamichos-Chronakis, Craig L Peterson. Nat Struct Mol Biol 2008
13
Ultraviolet radiation-induced ubiquitination and proteasomal degradation of the large subunit of RNA polymerase II. Implications for transcription-coupled DNA repair.
J N Ratner, B Balasubramanian, J Corden, S L Warren, D B Bregman. J Biol Chem 1998
J N Ratner, B Balasubramanian, J Corden, S L Warren, D B Bregman. J Biol Chem 1998
13
Mutations in UVSSA cause UV-sensitive syndrome and impair RNA polymerase IIo processing in transcription-coupled nucleotide-excision repair.
Yuka Nakazawa, Kensaku Sasaki, Norisato Mitsutake, Michiko Matsuse, Mayuko Shimada, Tiziana Nardo, Yoshito Takahashi, Kaname Ohyama, Kosei Ito, Hiroyuki Mishima,[...]. Nat Genet 2012
Yuka Nakazawa, Kensaku Sasaki, Norisato Mitsutake, Michiko Matsuse, Mayuko Shimada, Tiziana Nardo, Yoshito Takahashi, Kaname Ohyama, Kosei Ito, Hiroyuki Mishima,[...]. Nat Genet 2012
13
Genome-wide nucleosome specificity and directionality of chromatin remodelers.
Kuangyu Yen, Vinesh Vinayachandran, Kiran Batta, R Thomas Koerber, B Franklin Pugh. Cell 2012
Kuangyu Yen, Vinesh Vinayachandran, Kiran Batta, R Thomas Koerber, B Franklin Pugh. Cell 2012
13
Involvement of actin-related proteins in ATP-dependent chromatin remodeling.
Xuetong Shen, Ryan Ranallo, Eugene Choi, Carl Wu. Mol Cell 2003
Xuetong Shen, Ryan Ranallo, Eugene Choi, Carl Wu. Mol Cell 2003
13
The product of the SNF2/SWI2 paralogue INO80 of Saccharomyces cerevisiae required for efficient expression of various yeast structural genes is part of a high-molecular-weight protein complex.
R Ebbert, A Birkmann, H J Schüller. Mol Microbiol 1999
R Ebbert, A Birkmann, H J Schüller. Mol Microbiol 1999
13
Chromatin remodelling beyond transcription: the INO80 and SWR1 complexes.
Ashby J Morrison, Xuetong Shen. Nat Rev Mol Cell Biol 2009
Ashby J Morrison, Xuetong Shen. Nat Rev Mol Cell Biol 2009
13
Constitutive turnover of histone H2A.Z at yeast promoters requires the preinitiation complex.
Michael Tramantano, Lu Sun, Christy Au, Daniel Labuz, Zhimin Liu, Mindy Chou, Chen Shen, Ed Luk. Elife 2016
Michael Tramantano, Lu Sun, Christy Au, Daniel Labuz, Zhimin Liu, Mindy Chou, Chen Shen, Ed Luk. Elife 2016
13
Removal of H2A.Z by INO80 promotes homologous recombination.
Hanan E Alatwi, Jessica A Downs. EMBO Rep 2015
Hanan E Alatwi, Jessica A Downs. EMBO Rep 2015
13
The INO80 chromatin remodeling complex in transcription, replication and repair.
Ronald C Conaway, Joan Weliky Conaway. Trends Biochem Sci 2009
Ronald C Conaway, Joan Weliky Conaway. Trends Biochem Sci 2009
13
INO80 facilitates pluripotency gene activation in embryonic stem cell self-renewal, reprogramming, and blastocyst development.
Li Wang, Ying Du, James M Ward, Takashi Shimbo, Brad Lackford, Xiaofeng Zheng, Yi-liang Miao, Bingying Zhou, Leng Han, David C Fargo,[...]. Cell Stem Cell 2014
Li Wang, Ying Du, James M Ward, Takashi Shimbo, Brad Lackford, Xiaofeng Zheng, Yi-liang Miao, Bingying Zhou, Leng Han, David C Fargo,[...]. Cell Stem Cell 2014
13
The mammalian INO80 chromatin remodeling complex is required for replication stress recovery.
Ivelina Vassileva, Iskra Yanakieva, Michaela Peycheva, Anastas Gospodinov, Boyka Anachkova. Nucleic Acids Res 2014
Ivelina Vassileva, Iskra Yanakieva, Michaela Peycheva, Anastas Gospodinov, Boyka Anachkova. Nucleic Acids Res 2014
17
Conflict Resolution in the Genome: How Transcription and Replication Make It Work.
Stephan Hamperl, Karlene A Cimprich. Cell 2016
Stephan Hamperl, Karlene A Cimprich. Cell 2016
13
Transcription-Replication Conflict Orientation Modulates R-Loop Levels and Activates Distinct DNA Damage Responses.
Stephan Hamperl, Michael J Bocek, Joshua C Saldivar, Tomek Swigut, Karlene A Cimprich. Cell 2017
Stephan Hamperl, Michael J Bocek, Joshua C Saldivar, Tomek Swigut, Karlene A Cimprich. Cell 2017
13
Impairment of replication fork progression mediates RNA polII transcription-associated recombination.
Félix Prado, Andrés Aguilera. EMBO J 2005
Félix Prado, Andrés Aguilera. EMBO J 2005
10
The yeast and human FACT chromatin-reorganizing complexes solve R-loop-mediated transcription-replication conflicts.
Emilia Herrera-Moyano, Xénia Mergui, María L García-Rubio, Sonia Barroso, Andrés Aguilera. Genes Dev 2014
Emilia Herrera-Moyano, Xénia Mergui, María L García-Rubio, Sonia Barroso, Andrés Aguilera. Genes Dev 2014
10
Sensing DNA damage through ATRIP recognition of RPA-ssDNA complexes.
Lee Zou, Stephen J Elledge. Science 2003
Lee Zou, Stephen J Elledge. Science 2003
10
Chromatin retention of DNA damage sensors DDB2 and XPC through loss of p97 segregase causes genotoxicity.
Marjo-Riitta Puumalainen, Davor Lessel, Peter Rüthemann, Nina Kaczmarek, Karin Bachmann, Kristijan Ramadan, Hanspeter Naegeli. Nat Commun 2014
Marjo-Riitta Puumalainen, Davor Lessel, Peter Rüthemann, Nina Kaczmarek, Karin Bachmann, Kristijan Ramadan, Hanspeter Naegeli. Nat Commun 2014
10
Control of p97 function by cofactor binding.
Alexander Buchberger, Hermann Schindelin, Petra Hänzelmann. FEBS Lett 2015
Alexander Buchberger, Hermann Schindelin, Petra Hänzelmann. FEBS Lett 2015
10
Role of the ubiquitin-selective CDC48(UFD1/NPL4 )chaperone (segregase) in ERAD of OLE1 and other substrates.
Sigurd Braun, Kai Matuschewski, Michael Rape, Sven Thoms, Stefan Jentsch. EMBO J 2002
Sigurd Braun, Kai Matuschewski, Michael Rape, Sven Thoms, Stefan Jentsch. EMBO J 2002
10
Ubiquitin-specific protease 7 regulates nucleotide excision repair through deubiquitinating XPC protein and preventing XPC protein from undergoing ultraviolet light-induced and VCP/p97 protein-regulated proteolysis.
Jinshan He, Qianzheng Zhu, Gulzar Wani, Nidhi Sharma, Chunhua Han, Jiang Qian, Kyle Pentz, Qi-En Wang, Altaf A Wani. J Biol Chem 2014
Jinshan He, Qianzheng Zhu, Gulzar Wani, Nidhi Sharma, Chunhua Han, Jiang Qian, Kyle Pentz, Qi-En Wang, Altaf A Wani. J Biol Chem 2014
10
Requirement of ELC1 for RNA polymerase II polyubiquitylation and degradation in response to DNA damage in Saccharomyces cerevisiae.
Balazs Ribar, Louise Prakash, Satya Prakash. Mol Cell Biol 2006
Balazs Ribar, Louise Prakash, Satya Prakash. Mol Cell Biol 2006
11
Mutations in UVSSA cause UV-sensitive syndrome and destabilize ERCC6 in transcription-coupled DNA repair.
Xue Zhang, Katsuyoshi Horibata, Masafumi Saijo, Chie Ishigami, Akiko Ukai, Shin-ichiro Kanno, Hidetoshi Tahara, Edward G Neilan, Masamitsu Honma, Takehiko Nohmi,[...]. Nat Genet 2012
Xue Zhang, Katsuyoshi Horibata, Masafumi Saijo, Chie Ishigami, Akiko Ukai, Shin-ichiro Kanno, Hidetoshi Tahara, Edward G Neilan, Masamitsu Honma, Takehiko Nohmi,[...]. Nat Genet 2012
10
UV-sensitive syndrome protein UVSSA recruits USP7 to regulate transcription-coupled repair.
Petra Schwertman, Anna Lagarou, Dick H W Dekkers, Anja Raams, Adriana C van der Hoek, Charlie Laffeber, Jan H J Hoeijmakers, Jeroen A A Demmers, Maria Fousteri, Wim Vermeulen,[...]. Nat Genet 2012
Petra Schwertman, Anna Lagarou, Dick H W Dekkers, Anja Raams, Adriana C van der Hoek, Charlie Laffeber, Jan H J Hoeijmakers, Jeroen A A Demmers, Maria Fousteri, Wim Vermeulen,[...]. Nat Genet 2012
10
UV-induced ubiquitination of RNA polymerase II: a novel modification deficient in Cockayne syndrome cells.
D B Bregman, R Halaban, A J van Gool, K A Henning, E C Friedberg, S L Warren. Proc Natl Acad Sci U S A 1996
D B Bregman, R Halaban, A J van Gool, K A Henning, E C Friedberg, S L Warren. Proc Natl Acad Sci U S A 1996
10
Ring of Change: CDC48/p97 Drives Protein Dynamics at Chromatin.
André Franz, Leena Ackermann, Thorsten Hoppe. Front Genet 2016
André Franz, Leena Ackermann, Thorsten Hoppe. Front Genet 2016
10
Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.