A citation-based method for searching scientific literature

Dawood B Dudekula, Amaresh C Panda, Ioannis Grammatikakis, Supriyo De, Kotb Abdelmohsen, Myriam Gorospe. RNA Biol 2016
Times Cited: 654







List of co-cited articles
704 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Circular RNAs are a large class of animal RNAs with regulatory potency.
Sebastian Memczak, Marvin Jens, Antigoni Elefsinioti, Francesca Torti, Janna Krueger, Agnieszka Rybak, Luisa Maier, Sebastian D Mackowiak, Lea H Gregersen, Mathias Munschauer,[...]. Nature 2013
42

Natural RNA circles function as efficient microRNA sponges.
Thomas B Hansen, Trine I Jensen, Bettina H Clausen, Jesper B Bramsen, Bente Finsen, Christian K Damgaard, Jørgen Kjems. Nature 2013
40

circBase: a database for circular RNAs.
Petar Glažar, Panagiotis Papavasileiou, Nikolaus Rajewsky. RNA 2014
997
36

The biogenesis, biology and characterization of circular RNAs.
Lasse S Kristensen, Maria S Andersen, Lotte V W Stagsted, Karoline K Ebbesen, Thomas B Hansen, Jørgen Kjems. Nat Rev Genet 2019
35

Circular RNAs are abundant, conserved, and associated with ALU repeats.
William R Jeck, Jessica A Sorrentino, Kai Wang, Michael K Slevin, Christin E Burd, Jinze Liu, William F Marzluff, Norman E Sharpless. RNA 2013
31

Exon-intron circular RNAs regulate transcription in the nucleus.
Zhaoyong Li, Chuan Huang, Chun Bao, Liang Chen, Mei Lin, Xiaolin Wang, Guolin Zhong, Bin Yu, Wanchen Hu, Limin Dai,[...]. Nat Struct Mol Biol 2015
26

Circbank: a comprehensive database for circRNA with standard nomenclature.
Ming Liu, Qian Wang, Jian Shen, Burton B Yang, Xiangming Ding. RNA Biol 2019
162
25

starBase v2.0: decoding miRNA-ceRNA, miRNA-ncRNA and protein-RNA interaction networks from large-scale CLIP-Seq data.
Jun-Hao Li, Shun Liu, Hui Zhou, Liang-Hu Qu, Jian-Hua Yang. Nucleic Acids Res 2014
25

Circ-ZNF609 Is a Circular RNA that Can Be Translated and Functions in Myogenesis.
Ivano Legnini, Gaia Di Timoteo, Francesca Rossi, Mariangela Morlando, Francesca Briganti, Olga Sthandier, Alessandro Fatica, Tiziana Santini, Adrian Andronache, Mark Wade,[...]. Mol Cell 2017
22

circRNA biogenesis competes with pre-mRNA splicing.
Reut Ashwal-Fluss, Markus Meyer, Nagarjuna Reddy Pamudurti, Andranik Ivanov, Osnat Bartok, Mor Hanan, Naveh Evantal, Sebastian Memczak, Nikolaus Rajewsky, Sebastian Kadener. Mol Cell 2014
20

Circular intronic long noncoding RNAs.
Yang Zhang, Xiao-Ou Zhang, Tian Chen, Jian-Feng Xiang, Qing-Fei Yin, Yu-Hang Xing, Shanshan Zhu, Li Yang, Ling-Ling Chen. Mol Cell 2013
20

The RNA binding protein quaking regulates formation of circRNAs.
Simon J Conn, Katherine A Pillman, John Toubia, Vanessa M Conn, Marika Salmanidis, Caroline A Phillips, Suraya Roslan, Andreas W Schreiber, Philip A Gregory, Gregory J Goodall. Cell 2015
18

The Landscape of Circular RNA in Cancer.
Josh N Vo, Marcin Cieslik, Yajia Zhang, Sudhanshu Shukla, Lanbo Xiao, Yuping Zhang, Yi-Mi Wu, Saravana M Dhanasekaran, Carl G Engelke, Xuhong Cao,[...]. Cell 2019
764
18

Complementary sequence-mediated exon circularization.
Xiao-Ou Zhang, Hai-Bin Wang, Yang Zhang, Xuhua Lu, Ling-Ling Chen, Li Yang. Cell 2014
17

Global Cancer Statistics 2020: GLOBOCAN Estimates of Incidence and Mortality Worldwide for 36 Cancers in 185 Countries.
Hyuna Sung, Jacques Ferlay, Rebecca L Siegel, Mathieu Laversanne, Isabelle Soerjomataram, Ahmedin Jemal, Freddie Bray. CA Cancer J Clin 2021
17

Foxo3 circular RNA retards cell cycle progression via forming ternary complexes with p21 and CDK2.
William W Du, Weining Yang, Elizabeth Liu, Zhenguo Yang, Preet Dhaliwal, Burton B Yang. Nucleic Acids Res 2016
16

Cell-type specific features of circular RNA expression.
Julia Salzman, Raymond E Chen, Mari N Olsen, Peter L Wang, Patrick O Brown. PLoS Genet 2013
16

Circular RNAs in the Mammalian Brain Are Highly Abundant, Conserved, and Dynamically Expressed.
Agnieszka Rybak-Wolf, Christin Stottmeister, Petar Glažar, Marvin Jens, Natalia Pino, Sebastian Giusti, Mor Hanan, Mikaela Behm, Osnat Bartok, Reut Ashwal-Fluss,[...]. Mol Cell 2015
16

Viroids are single-stranded covalently closed circular RNA molecules existing as highly base-paired rod-like structures.
H L Sanger, G Klotz, D Riesner, H J Gross, A K Kleinschmidt. Proc Natl Acad Sci U S A 1976
15

Extensive translation of circular RNAs driven by N6-methyladenosine.
Yun Yang, Xiaojuan Fan, Miaowei Mao, Xiaowei Song, Ping Wu, Yang Zhang, Yongfeng Jin, Yi Yang, Ling-Ling Chen, Yang Wang,[...]. Cell Res 2017
969
15

Circ2Traits: a comprehensive database for circular RNA potentially associated with disease and traits.
Suman Ghosal, Shaoli Das, Rituparno Sen, Piyali Basak, Jayprokas Chakrabarti. Front Genet 2013
332
15

Circular RNA profiling reveals an abundant circHIPK3 that regulates cell growth by sponging multiple miRNAs.
Qiupeng Zheng, Chunyang Bao, Weijie Guo, Shuyi Li, Jie Chen, Bing Chen, Yanting Luo, Dongbin Lyu, Yan Li, Guohai Shi,[...]. Nat Commun 2016
15

Circular RNA is enriched and stable in exosomes: a promising biomarker for cancer diagnosis.
Yan Li, Qiupeng Zheng, Chunyang Bao, Shuyi Li, Weijie Guo, Jiang Zhao, Di Chen, Jianren Gu, Xianghuo He, Shenglin Huang. Cell Res 2015
14

Identification of HuR target circular RNAs uncovers suppression of PABPN1 translation by CircPABPN1.
Kotb Abdelmohsen, Amaresh C Panda, Rachel Munk, Ioannis Grammatikakis, Dawood B Dudekula, Supriyo De, Jiyoung Kim, Ji Heon Noh, Kyoung Mi Kim, Jennifer L Martindale,[...]. RNA Biol 2017
478
14


Predicting effective microRNA target sites in mammalian mRNAs.
Vikram Agarwal, George W Bell, Jin-Wu Nam, David P Bartel. Elife 2015
14


Circular RNAs in cancer: opportunities and challenges in the field.
L S Kristensen, T B Hansen, M T Venø, J Kjems. Oncogene 2018
854
13

Mis-splicing yields circular RNA molecules.
C Cocquerelle, B Mascrez, D Hétuin, B Bailleul. FASEB J 1993
757
13

Translation of CircRNAs.
Nagarjuna Reddy Pamudurti, Osnat Bartok, Marvin Jens, Reut Ashwal-Fluss, Christin Stottmeister, Larissa Ruhe, Mor Hanan, Emanuel Wyler, Daniel Perez-Hernandez, Evelyn Ramberger,[...]. Mol Cell 2017
998
13

CSCD: a database for cancer-specific circular RNAs.
Siyu Xia, Jing Feng, Ke Chen, Yanbing Ma, Jing Gong, Fangfang Cai, Yuxuan Jin, Yang Gao, Linjian Xia, Hong Chang,[...]. Nucleic Acids Res 2018
227
13

Expanded identification and characterization of mammalian circular RNAs.
Junjie U Guo, Vikram Agarwal, Huili Guo, David P Bartel. Genome Biol 2014
12

Circular RNAs are the predominant transcript isoform from hundreds of human genes in diverse cell types.
Julia Salzman, Charles Gawad, Peter Lincoln Wang, Norman Lacayo, Patrick O Brown. PLoS One 2012
11

Detecting circular RNAs: bioinformatic and experimental challenges.
Linda Szabo, Julia Salzman. Nat Rev Genet 2016
390
11

Global cancer statistics 2018: GLOBOCAN estimates of incidence and mortality worldwide for 36 cancers in 185 countries.
Freddie Bray, Jacques Ferlay, Isabelle Soerjomataram, Rebecca L Siegel, Lindsey A Torre, Ahmedin Jemal. CA Cancer J Clin 2018
11

Circular RNAs Act as miRNA Sponges.
Amaresh Chandra Panda. Adv Exp Med Biol 2018
488
11



CircNet: a database of circular RNAs derived from transcriptome sequencing data.
Yu-Chen Liu, Jian-Rong Li, Chuan-Hu Sun, Erik Andrews, Rou-Fang Chao, Feng-Mao Lin, Shun-Long Weng, Sheng-Da Hsu, Chieh-Chen Huang, Chao Cheng,[...]. Nucleic Acids Res 2016
247
11

Detecting and characterizing circular RNAs.
William R Jeck, Norman E Sharpless. Nat Biotechnol 2014
11

Regulation of circRNA biogenesis.
Ling-Ling Chen, Li Yang. RNA Biol 2015
10

circRNADb: A comprehensive database for human circular RNAs with protein-coding annotations.
Xiaoping Chen, Ping Han, Tao Zhou, Xuejiang Guo, Xiaofeng Song, Yan Li. Sci Rep 2016
267
10

Induction of tumor apoptosis through a circular RNA enhancing Foxo3 activity.
William W Du, Ling Fang, Weining Yang, Nan Wu, Faryal Mehwish Awan, Zhenguo Yang, Burton B Yang. Cell Death Differ 2017
396
10

exoRBase: a database of circRNA, lncRNA and mRNA in human blood exosomes.
Shengli Li, Yuchen Li, Bing Chen, Jingjing Zhao, Shulin Yu, Yan Tang, Qiupeng Zheng, Yan Li, Peng Wang, Xianghuo He,[...]. Nucleic Acids Res 2018
294
10

The Biogenesis, Functions, and Challenges of Circular RNAs.
Xiang Li, Li Yang, Ling-Ling Chen. Mol Cell 2018
10

Analysis of intron sequences reveals hallmarks of circular RNA biogenesis in animals.
Andranik Ivanov, Sebastian Memczak, Emanuel Wyler, Francesca Torti, Hagit T Porath, Marta R Orejuela, Michael Piechotta, Erez Y Levanon, Markus Landthaler, Christoph Dieterich,[...]. Cell Rep 2015
652
10

Circular RNA circMTO1 acts as the sponge of microRNA-9 to suppress hepatocellular carcinoma progression.
Dan Han, Jiangxue Li, Huamin Wang, Xiaoping Su, Jin Hou, Yan Gu, Cheng Qian, Yun Lin, Xiang Liu, Mingyan Huang,[...]. Hepatology 2017
812
10

A ceRNA hypothesis: the Rosetta Stone of a hidden RNA language?
Leonardo Salmena, Laura Poliseno, Yvonne Tay, Lev Kats, Pier Paolo Pandolfi. Cell 2011
10

Comprehensive characterization of tissue-specific circular RNAs in the human and mouse genomes.
Siyu Xia, Jing Feng, Lijun Lei, Jun Hu, Linjian Xia, Jun Wang, Yu Xiang, Lingjun Liu, Shan Zhong, Leng Han,[...]. Brief Bioinform 2017
210
9

Short intronic repeat sequences facilitate circular RNA production.
Dongming Liang, Jeremy E Wilusz. Genes Dev 2014
580
9


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.