A citation-based method for searching scientific literature

Alexander B Wiltschko, Matthew J Johnson, Giuliano Iurilli, Ralph E Peterson, Jesse M Katon, Stan L Pashkovski, Victoria E Abraira, Ryan P Adams, Sandeep Robert Datta. Neuron 2015
Times Cited: 121







List of co-cited articles
664 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Mapping the stereotyped behaviour of freely moving fruit flies.
Gordon J Berman, Daniel M Choi, William Bialek, Joshua W Shaevitz. J R Soc Interface 2014
115
34

DeepLabCut: markerless pose estimation of user-defined body parts with deep learning.
Alexander Mathis, Pranav Mamidanna, Kevin M Cury, Taiga Abe, Venkatesh N Murthy, Mackenzie Weygandt Mathis, Matthias Bethge. Nat. Neurosci. 2018
167
31

Toward a science of computational ethology.
David J Anderson, Pietro Perona. Neuron 2014
113
29

JAABA: interactive machine learning for automatic annotation of animal behavior.
Mayank Kabra, Alice A Robie, Marta Rivera-Alba, Steven Branson, Kristin Branson. Nat. Methods 2013
149
25

Automated measurement of mouse social behaviors using depth sensing, video tracking, and machine learning.
Weizhe Hong, Ann Kennedy, Xavier P Burgos-Artizzu, Moriel Zelikowsky, Santiago G Navonne, Pietro Perona, David J Anderson. Proc. Natl. Acad. Sci. U.S.A. 2015
73
32

Fast animal pose estimation using deep neural networks.
Talmo D Pereira, Diego E Aldarondo, Lindsay Willmore, Mikhail Kislin, Samuel S-H Wang, Mala Murthy, Joshua W Shaevitz. Nat. Methods 2019
52
44

Neuroscience Needs Behavior: Correcting a Reductionist Bias.
John W Krakauer, Asif A Ghazanfar, Alex Gomez-Marin, Malcolm A MacIver, David Poeppel. Neuron 2017
225
22

The Striatum Organizes 3D Behavior via Moment-to-Moment Action Selection.
Jeffrey E Markowitz, Winthrop F Gillis, Celia C Beron, Shay Q Neufeld, Keiramarie Robertson, Neha D Bhagat, Ralph E Peterson, Emalee Peterson, Minsuk Hyun, Scott W Linderman,[...]. Cell 2018
58
34

Discovery of brainwide neural-behavioral maps via multiscale unsupervised structure learning.
Joshua T Vogelstein, Youngser Park, Tomoko Ohyama, Rex A Kerr, James W Truman, Carey E Priebe, Marta Zlatic. Science 2014
99
18

Dimensionality and dynamics in the behavior of C. elegans.
Greg J Stephens, Bethany Johnson-Kerner, William Bialek, William S Ryu. PLoS Comput. Biol. 2008
184
16

Mapping the Neural Substrates of Behavior.
Alice A Robie, Jonathan Hirokawa, Austin W Edwards, Lowell A Umayam, Allen Lee, Mary L Phillips, Gwyneth M Card, Wyatt Korff, Gerald M Rubin, Julie H Simpson,[...]. Cell 2017
61
24

A dictionary of behavioral motifs reveals clusters of genes affecting Caenorhabditis elegans locomotion.
André E X Brown, Eviatar I Yemini, Laura J Grundy, Tadas Jucikas, William R Schafer. Proc. Natl. Acad. Sci. U.S.A. 2013
86
16

Computational Analysis of Behavior.
S E Roian Egnor, Kristin Branson. Annu. Rev. Neurosci. 2016
41
34

Predictability and hierarchy in Drosophila behavior.
Gordon J Berman, William Bialek, Joshua W Shaevitz. Proc. Natl. Acad. Sci. U.S.A. 2016
32
43

Measuring behavior across scales.
Gordon J Berman. BMC Biol. 2018
26
53

High-throughput ethomics in large groups of Drosophila.
Kristin Branson, Alice A Robie, John Bender, Pietro Perona, Michael H Dickinson. Nat. Methods 2009
311
13

Big behavioral data: psychology, ethology and the foundations of neuroscience.
Alex Gomez-Marin, Joseph J Paton, Adam R Kampff, Rui M Costa, Zachary F Mainen. Nat. Neurosci. 2014
70
18

A quantitative framework for whole-body coordination reveals specific deficits in freely walking ataxic mice.
Ana S Machado, Dana M Darmohray, João Fayad, Hugo G Marques, Megan R Carey. Elife 2015
45
26

idTracker: tracking individuals in a group by automatic identification of unmarked animals.
Alfonso Pérez-Escudero, Julián Vicente-Page, Robert C Hinz, Sara Arganda, Gonzalo G de Polavieja. Nat. Methods 2014
184
11

An unsupervised method for quantifying the behavior of paired animals.
Ugne Klibaite, Gordon J Berman, Jessica Cande, David L Stern, Joshua W Shaevitz. Phys Biol 2017
19
57

The Spatiotemporal Organization of the Striatum Encodes Action Space.
Andreas Klaus, Gabriela J Martins, Vitor B Paixao, Pengcheng Zhou, Liam Paninski, Rui M Costa. Neuron 2017
66
16

Computational Neuroethology: A Call to Action.
Sandeep Robert Datta, David J Anderson, Kristin Branson, Pietro Perona, Andrew Leifer. Neuron 2019
26
42

Automated image-based tracking and its application in ecology.
Anthony I Dell, John A Bender, Kristin Branson, Iain D Couzin, Gonzalo G de Polavieja, Lucas P J J Noldus, Alfonso Pérez-Escudero, Pietro Perona, Andrew D Straw, Martin Wikelski,[...]. Trends Ecol. Evol. (Amst.) 2014
103
10

Systematic exploration of unsupervised methods for mapping behavior.
Jeremy G Todd, Jamey S Kain, Benjamin L de Bivort. Phys Biol 2017
21
47

DeepPoseKit, a software toolkit for fast and robust animal pose estimation using deep learning.
Jacob M Graving, Daniel Chae, Hemal Naik, Liang Li, Benjamin Koger, Blair R Costelloe, Iain D Couzin. Elife 2019
23
39

Automated monitoring and analysis of social behavior in Drosophila.
Heiko Dankert, Liming Wang, Eric D Hoopfer, David J Anderson, Pietro Perona. Nat. Methods 2009
166
8

Whole-brain calcium imaging with cellular resolution in freely behaving Caenorhabditis elegans.
Jeffrey P Nguyen, Frederick B Shipley, Ashley N Linder, George S Plummer, Mochi Liu, Sagar U Setru, Joshua W Shaevitz, Andrew M Leifer. Proc. Natl. Acad. Sci. U.S.A. 2016
106
8


Ultrasensitive fluorescent proteins for imaging neuronal activity.
Tsai-Wen Chen, Trevor J Wardill, Yi Sun, Stefan R Pulver, Sabine L Renninger, Amy Baohan, Eric R Schreiter, Rex A Kerr, Michael B Orger, Vivek Jayaraman,[...]. Nature 2013
8

Context-dependent computation by recurrent dynamics in prefrontal cortex.
Valerio Mante, David Sussillo, Krishna V Shenoy, William T Newsome. Nature 2013
424
8

Global brain dynamics embed the motor command sequence of Caenorhabditis elegans.
Saul Kato, Harris S Kaplan, Tina Schrödel, Susanne Skora, Theodore H Lindsay, Eviatar Yemini, Shawn Lockery, Manuel Zimmer. Cell 2015
112
8

Spontaneous behaviors drive multidimensional, brainwide activity.
Carsen Stringer, Marius Pachitariu, Nicholas Steinmetz, Charu Bai Reddy, Matteo Carandini, Kenneth D Harris. Science 2019
99
8

Structure of the Zebrafish Locomotor Repertoire Revealed with Unsupervised Behavioral Clustering.
João C Marques, Simone Lackner, Rita Félix, Michael B Orger. Curr. Biol. 2018
32
25

Using DeepLabCut for 3D markerless pose estimation across species and behaviors.
Tanmay Nath, Alexander Mathis, An Chi Chen, Amir Patel, Matthias Bethge, Mackenzie Weygandt Mathis. Nat Protoc 2019
42
19

A database of Caenorhabditis elegans behavioral phenotypes.
Eviatar Yemini, Tadas Jucikas, Laura J Grundy, André E X Brown, William R Schafer. Nat. Methods 2013
99
7

Independent optical excitation of distinct neural populations.
Nathan C Klapoetke, Yasunobu Murata, Sung Soo Kim, Stefan R Pulver, Amanda Birdsey-Benson, Yong Ku Cho, Tania K Morimoto, Amy S Chuong, Eric J Carpenter, Zhijian Tian,[...]. Nat. Methods 2014
692
7

Automated home-cage behavioural phenotyping of mice.
Hueihan Jhuang, Estibaliz Garrote, Jim Mutch, Xinlin Yu, Vinita Khilnani, Tomaso Poggio, Andrew D Steele, Thomas Serre. Nat Commun 2010
86
8

Dynamic sensory cues shape song structure in Drosophila.
Philip Coen, Jan Clemens, Andrew J Weinstein, Diego A Pacheco, Yi Deng, Mala Murthy. Nature 2014
55
12

Machine vision methods for analyzing social interactions.
Alice A Robie, Kelly M Seagraves, S E Roian Egnor, Kristin Branson. J. Exp. Biol. 2017
37
18

Automated long-term tracking and social behavioural phenotyping of animal colonies within a semi-natural environment.
Aharon Weissbrod, Alexander Shapiro, Genadiy Vasserman, Liat Edry, Molly Dayan, Assif Yitzhaky, Libi Hertzberg, Ofer Feinerman, Tali Kimchi. Nat Commun 2013
69
10

Optogenetic dissection of descending behavioral control in Drosophila.
Jessica Cande, Shigehiro Namiki, Jirui Qiu, Wyatt Korff, Gwyneth M Card, Joshua W Shaevitz, David L Stern, Gordon J Berman. Elife 2018
31
22

DeepFly3D, a deep learning-based approach for 3D limb and appendage tracking in tethered, adult Drosophila.
Semih Günel, Helge Rhodin, Daniel Morales, João Campagnolo, Pavan Ramdya, Pascal Fua. Elife 2019
10
70

Leg-tracking and automated behavioural classification in Drosophila.
Jamey Kain, Chris Stokes, Quentin Gaudry, Xiangzhi Song, James Foley, Rachel Wilson, Benjamin de Bivort. Nat Commun 2013
40
15

Pan-neuronal imaging in roaming Caenorhabditis elegans.
Vivek Venkatachalam, Ni Ji, Xian Wang, Christopher Clark, James Kameron Mitchell, Mason Klein, Christopher J Tabone, Jeremy Florman, Hongfei Ji, Joel Greenwood,[...]. Proc. Natl. Acad. Sci. U.S.A. 2016
68
8

Quantification of gait parameters in freely walking wild type and sensory deprived Drosophila melanogaster.
César S Mendes, Imre Bartos, Turgay Akay, Szabolcs Márka, Richard S Mann. Elife 2013
88
6

Brain-wide mapping of neural activity controlling zebrafish exploratory locomotion.
Timothy W Dunn, Yu Mu, Sujatha Narayan, Owen Randlett, Eva A Naumann, Chao-Tsung Yang, Alexander F Schier, Jeremy Freeman, Florian Engert, Misha B Ahrens. Elife 2016
81
7

Automated multi-day tracking of marked mice for the analysis of social behaviour.
Shay Ohayon, Ofer Avni, Adam L Taylor, Pietro Perona, S E Roian Egnor. J. Neurosci. Methods 2013
53
11

Neural population dynamics during reaching.
Mark M Churchland, John P Cunningham, Matthew T Kaufman, Justin D Foster, Paul Nuyujukian, Stephen I Ryu, Krishna V Shenoy. Nature 2012
417
6

Cortex commands the performance of skilled movement.
Jian-Zhong Guo, Austin R Graves, Wendy W Guo, Jihong Zheng, Allen Lee, Juan Rodríguez-González, Nuo Li, John J Macklin, James W Phillips, Brett D Mensh,[...]. Elife 2015
68
8

Imaging large-scale neural activity with cellular resolution in awake, mobile mice.
Daniel A Dombeck, Anton N Khabbaz, Forrest Collman, Thomas L Adelman, David W Tank. Neuron 2007
537
6


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.