Alexander B Wiltschko, Matthew J Johnson, Giuliano Iurilli, Ralph E Peterson, Jesse M Katon, Stan L Pashkovski, Victoria E Abraira, Ryan P Adams, Sandeep Robert Datta. Neuron 2015
Times Cited: 192
Times Cited: 192
Times Cited
Times Co-cited
Similarity
DeepLabCut: markerless pose estimation of user-defined body parts with deep learning.
Alexander Mathis, Pranav Mamidanna, Kevin M Cury, Taiga Abe, Venkatesh N Murthy, Mackenzie Weygandt Mathis, Matthias Bethge. Nat Neurosci 2018
Alexander Mathis, Pranav Mamidanna, Kevin M Cury, Taiga Abe, Venkatesh N Murthy, Mackenzie Weygandt Mathis, Matthias Bethge. Nat Neurosci 2018
55
Fast animal pose estimation using deep neural networks.
Talmo D Pereira, Diego E Aldarondo, Lindsay Willmore, Mikhail Kislin, Samuel S-H Wang, Mala Murthy, Joshua W Shaevitz. Nat Methods 2019
Talmo D Pereira, Diego E Aldarondo, Lindsay Willmore, Mikhail Kislin, Samuel S-H Wang, Mala Murthy, Joshua W Shaevitz. Nat Methods 2019
32
Mapping the stereotyped behaviour of freely moving fruit flies.
Gordon J Berman, Daniel M Choi, William Bialek, Joshua W Shaevitz. J R Soc Interface 2014
Gordon J Berman, Daniel M Choi, William Bialek, Joshua W Shaevitz. J R Soc Interface 2014
32
The Striatum Organizes 3D Behavior via Moment-to-Moment Action Selection.
Jeffrey E Markowitz, Winthrop F Gillis, Celia C Beron, Shay Q Neufeld, Keiramarie Robertson, Neha D Bhagat, Ralph E Peterson, Emalee Peterson, Minsuk Hyun, Scott W Linderman,[...]. Cell 2018
Jeffrey E Markowitz, Winthrop F Gillis, Celia C Beron, Shay Q Neufeld, Keiramarie Robertson, Neha D Bhagat, Ralph E Peterson, Emalee Peterson, Minsuk Hyun, Scott W Linderman,[...]. Cell 2018
31
Computational Neuroethology: A Call to Action.
Sandeep Robert Datta, David J Anderson, Kristin Branson, Pietro Perona, Andrew Leifer. Neuron 2019
Sandeep Robert Datta, David J Anderson, Kristin Branson, Pietro Perona, Andrew Leifer. Neuron 2019
41
Using DeepLabCut for 3D markerless pose estimation across species and behaviors.
Tanmay Nath, Alexander Mathis, An Chi Chen, Amir Patel, Matthias Bethge, Mackenzie Weygandt Mathis. Nat Protoc 2019
Tanmay Nath, Alexander Mathis, An Chi Chen, Amir Patel, Matthias Bethge, Mackenzie Weygandt Mathis. Nat Protoc 2019
25
DeepPoseKit, a software toolkit for fast and robust animal pose estimation using deep learning.
Jacob M Graving, Daniel Chae, Hemal Naik, Liang Li, Benjamin Koger, Blair R Costelloe, Iain D Couzin. Elife 2019
Jacob M Graving, Daniel Chae, Hemal Naik, Liang Li, Benjamin Koger, Blair R Costelloe, Iain D Couzin. Elife 2019
36
Neuroscience Needs Behavior: Correcting a Reductionist Bias.
John W Krakauer, Asif A Ghazanfar, Alex Gomez-Marin, Malcolm A MacIver, David Poeppel. Neuron 2017
John W Krakauer, Asif A Ghazanfar, Alex Gomez-Marin, Malcolm A MacIver, David Poeppel. Neuron 2017
21
Automated measurement of mouse social behaviors using depth sensing, video tracking, and machine learning.
Weizhe Hong, Ann Kennedy, Xavier P Burgos-Artizzu, Moriel Zelikowsky, Santiago G Navonne, Pietro Perona, David J Anderson. Proc Natl Acad Sci U S A 2015
Weizhe Hong, Ann Kennedy, Xavier P Burgos-Artizzu, Moriel Zelikowsky, Santiago G Navonne, Pietro Perona, David J Anderson. Proc Natl Acad Sci U S A 2015
21
Predictability and hierarchy in Drosophila behavior.
Gordon J Berman, William Bialek, Joshua W Shaevitz. Proc Natl Acad Sci U S A 2016
Gordon J Berman, William Bialek, Joshua W Shaevitz. Proc Natl Acad Sci U S A 2016
32
JAABA: interactive machine learning for automatic annotation of animal behavior.
Mayank Kabra, Alice A Robie, Marta Rivera-Alba, Steven Branson, Kristin Branson. Nat Methods 2013
Mayank Kabra, Alice A Robie, Marta Rivera-Alba, Steven Branson, Kristin Branson. Nat Methods 2013
19
Spontaneous behaviors drive multidimensional, brainwide activity.
Carsen Stringer, Marius Pachitariu, Nicholas Steinmetz, Charu Bai Reddy, Matteo Carandini, Kenneth D Harris. Science 2019
Carsen Stringer, Marius Pachitariu, Nicholas Steinmetz, Charu Bai Reddy, Matteo Carandini, Kenneth D Harris. Science 2019
18
Single-trial neural dynamics are dominated by richly varied movements.
Simon Musall, Matthew T Kaufman, Ashley L Juavinett, Steven Gluf, Anne K Churchland. Nat Neurosci 2019
Simon Musall, Matthew T Kaufman, Ashley L Juavinett, Steven Gluf, Anne K Churchland. Nat Neurosci 2019
15
Structure of the Zebrafish Locomotor Repertoire Revealed with Unsupervised Behavioral Clustering.
João C Marques, Simone Lackner, Rita Félix, Michael B Orger. Curr Biol 2018
João C Marques, Simone Lackner, Rita Félix, Michael B Orger. Curr Biol 2018
19
DeepFly3D, a deep learning-based approach for 3D limb and appendage tracking in tethered, adult Drosophila.
Semih Günel, Helge Rhodin, Daniel Morales, João Campagnolo, Pavan Ramdya, Pascal Fua. Elife 2019
Semih Günel, Helge Rhodin, Daniel Morales, João Campagnolo, Pavan Ramdya, Pascal Fua. Elife 2019
52
Dimensionality and dynamics in the behavior of C. elegans.
Greg J Stephens, Bethany Johnson-Kerner, William Bialek, William S Ryu. PLoS Comput Biol 2008
Greg J Stephens, Bethany Johnson-Kerner, William Bialek, William S Ryu. PLoS Comput Biol 2008
13
Discovery of brainwide neural-behavioral maps via multiscale unsupervised structure learning.
Joshua T Vogelstein, Youngser Park, Tomoko Ohyama, Rex A Kerr, James W Truman, Carey E Priebe, Marta Zlatic. Science 2014
Joshua T Vogelstein, Youngser Park, Tomoko Ohyama, Rex A Kerr, James W Truman, Carey E Priebe, Marta Zlatic. Science 2014
12
Big behavioral data: psychology, ethology and the foundations of neuroscience.
Alex Gomez-Marin, Joseph J Paton, Adam R Kampff, Rui M Costa, Zachary F Mainen. Nat Neurosci 2014
Alex Gomez-Marin, Joseph J Paton, Adam R Kampff, Rui M Costa, Zachary F Mainen. Nat Neurosci 2014
12
A Head-Mounted Camera System Integrates Detailed Behavioral Monitoring with Multichannel Electrophysiology in Freely Moving Mice.
Arne F Meyer, Jasper Poort, John O'Keefe, Maneesh Sahani, Jennifer F Linden. Neuron 2018
Arne F Meyer, Jasper Poort, John O'Keefe, Maneesh Sahani, Jennifer F Linden. Neuron 2018
28
17
A quantitative framework for whole-body coordination reveals specific deficits in freely walking ataxic mice.
Ana S Machado, Dana M Darmohray, João Fayad, Hugo G Marques, Megan R Carey. Elife 2015
Ana S Machado, Dana M Darmohray, João Fayad, Hugo G Marques, Megan R Carey. Elife 2015
14
Modulation of visual responses by behavioral state in mouse visual cortex.
Cristopher M Niell, Michael P Stryker. Neuron 2010
Cristopher M Niell, Michael P Stryker. Neuron 2010
9
Facial expressions of emotion states and their neuronal correlates in mice.
Nejc Dolensek, Daniel A Gehrlach, Alexandra S Klein, Nadine Gogolla. Science 2020
Nejc Dolensek, Daniel A Gehrlach, Alexandra S Klein, Nadine Gogolla. Science 2020
20
Real-time analysis of the behaviour of groups of mice via a depth-sensing camera and machine learning.
Fabrice de Chaumont, Elodie Ey, Nicolas Torquet, Thibault Lagache, Stéphane Dallongeville, Albane Imbert, Thierry Legou, Anne-Marie Le Sourd, Philippe Faure, Thomas Bourgeron,[...]. Nat Biomed Eng 2019
Fabrice de Chaumont, Elodie Ey, Nicolas Torquet, Thibault Lagache, Stéphane Dallongeville, Albane Imbert, Thierry Legou, Anne-Marie Le Sourd, Philippe Faure, Thomas Bourgeron,[...]. Nat Biomed Eng 2019
50
Deep learning tools for the measurement of animal behavior in neuroscience.
Mackenzie Weygandt Mathis, Alexander Mathis. Curr Opin Neurobiol 2020
Mackenzie Weygandt Mathis, Alexander Mathis. Curr Opin Neurobiol 2020
23
Revealing the structure of pharmacobehavioral space through motion sequencing.
Alexander B Wiltschko, Tatsuya Tsukahara, Ayman Zeine, Rockwell Anyoha, Winthrop F Gillis, Jeffrey E Markowitz, Ralph E Peterson, Jesse Katon, Matthew J Johnson, Sandeep Robert Datta. Nat Neurosci 2020
Alexander B Wiltschko, Tatsuya Tsukahara, Ayman Zeine, Rockwell Anyoha, Winthrop F Gillis, Jeffrey E Markowitz, Ralph E Peterson, Jesse Katon, Matthew J Johnson, Sandeep Robert Datta. Nat Neurosci 2020
75
The Spatiotemporal Organization of the Striatum Encodes Action Space.
Andreas Klaus, Gabriela J Martins, Vitor B Paixao, Pengcheng Zhou, Liam Paninski, Rui M Costa. Neuron 2017
Andreas Klaus, Gabriela J Martins, Vitor B Paixao, Pengcheng Zhou, Liam Paninski, Rui M Costa. Neuron 2017
9
idtracker.ai: tracking all individuals in small or large collectives of unmarked animals.
Francisco Romero-Ferrero, Mattia G Bergomi, Robert C Hinz, Francisco J H Heras, Gonzalo G de Polavieja. Nat Methods 2019
Francisco Romero-Ferrero, Mattia G Bergomi, Robert C Hinz, Francisco J H Heras, Gonzalo G de Polavieja. Nat Methods 2019
18
Systematic exploration of unsupervised methods for mapping behavior.
Jeremy G Todd, Jamey S Kain, Benjamin L de Bivort. Phys Biol 2017
Jeremy G Todd, Jamey S Kain, Benjamin L de Bivort. Phys Biol 2017
28
Automated long-term tracking and social behavioural phenotyping of animal colonies within a semi-natural environment.
Aharon Weissbrod, Alexander Shapiro, Genadiy Vasserman, Liat Edry, Molly Dayan, Assif Yitzhaky, Libi Hertzberg, Ofer Feinerman, Tali Kimchi. Nat Commun 2013
Aharon Weissbrod, Alexander Shapiro, Genadiy Vasserman, Liat Edry, Molly Dayan, Assif Yitzhaky, Libi Hertzberg, Ofer Feinerman, Tali Kimchi. Nat Commun 2013
8
An unsupervised method for quantifying the behavior of paired animals.
Ugne Klibaite, Gordon J Berman, Jessica Cande, David L Stern, Joshua W Shaevitz. Phys Biol 2017
Ugne Klibaite, Gordon J Berman, Jessica Cande, David L Stern, Joshua W Shaevitz. Phys Biol 2017
30
Sensorimotor mismatch signals in primary visual cortex of the behaving mouse.
Georg B Keller, Tobias Bonhoeffer, Mark Hübener. Neuron 2012
Georg B Keller, Tobias Bonhoeffer, Mark Hübener. Neuron 2012
7
Fiji: an open-source platform for biological-image analysis.
Johannes Schindelin, Ignacio Arganda-Carreras, Erwin Frise, Verena Kaynig, Mark Longair, Tobias Pietzsch, Stephan Preibisch, Curtis Rueden, Stephan Saalfeld, Benjamin Schmid,[...]. Nat Methods 2012
Johannes Schindelin, Ignacio Arganda-Carreras, Erwin Frise, Verena Kaynig, Mark Longair, Tobias Pietzsch, Stephan Preibisch, Curtis Rueden, Stephan Saalfeld, Benjamin Schmid,[...]. Nat Methods 2012
7
Mapping the Neural Substrates of Behavior.
Alice A Robie, Jonathan Hirokawa, Austin W Edwards, Lowell A Umayam, Allen Lee, Mary L Phillips, Gwyneth M Card, Wyatt Korff, Gerald M Rubin, Julie H Simpson,[...]. Cell 2017
Alice A Robie, Jonathan Hirokawa, Austin W Edwards, Lowell A Umayam, Allen Lee, Mary L Phillips, Gwyneth M Card, Wyatt Korff, Gerald M Rubin, Julie H Simpson,[...]. Cell 2017
7
Deconstructing Hunting Behavior Reveals a Tightly Coupled Stimulus-Response Loop.
Duncan S Mearns, Joseph C Donovan, António M Fernandes, Julia L Semmelhack, Herwig Baier. Curr Biol 2020
Duncan S Mearns, Joseph C Donovan, António M Fernandes, Julia L Semmelhack, Herwig Baier. Curr Biol 2020
25
Unsupervised identification of the internal states that shape natural behavior.
Adam J Calhoun, Jonathan W Pillow, Mala Murthy. Nat Neurosci 2019
Adam J Calhoun, Jonathan W Pillow, Mala Murthy. Nat Neurosci 2019
30
Probabilistic Models of Larval Zebrafish Behavior Reveal Structure on Many Scales.
Robert Evan Johnson, Scott Linderman, Thomas Panier, Caroline Lei Wee, Erin Song, Kristian Joseph Herrera, Andrew Miller, Florian Engert. Curr Biol 2020
Robert Evan Johnson, Scott Linderman, Thomas Panier, Caroline Lei Wee, Erin Song, Kristian Joseph Herrera, Andrew Miller, Florian Engert. Curr Biol 2020
30
Machine vision methods for analyzing social interactions.
Alice A Robie, Kelly M Seagraves, S E Roian Egnor, Kristin Branson. J Exp Biol 2017
Alice A Robie, Kelly M Seagraves, S E Roian Egnor, Kristin Branson. J Exp Biol 2017
15
idTracker: tracking individuals in a group by automatic identification of unmarked animals.
Alfonso Pérez-Escudero, Julián Vicente-Page, Robert C Hinz, Sara Arganda, Gonzalo G de Polavieja. Nat Methods 2014
Alfonso Pérez-Escudero, Julián Vicente-Page, Robert C Hinz, Sara Arganda, Gonzalo G de Polavieja. Nat Methods 2014
7
High-throughput ethomics in large groups of Drosophila.
Kristin Branson, Alice A Robie, John Bender, Pietro Perona, Michael H Dickinson. Nat Methods 2009
Kristin Branson, Alice A Robie, John Bender, Pietro Perona, Michael H Dickinson. Nat Methods 2009
7
Big behavior: challenges and opportunities in a new era of deep behavior profiling.
Lukas von Ziegler, Oliver Sturman, Johannes Bohacek. Neuropsychopharmacology 2021
Lukas von Ziegler, Oliver Sturman, Johannes Bohacek. Neuropsychopharmacology 2021
50
Efficient cortical coding of 3D posture in freely behaving rats.
Bartul Mimica, Benjamin A Dunn, Tuce Tombaz, V P T N C Srikanth Bojja, Jonathan R Whitlock. Science 2018
Bartul Mimica, Benjamin A Dunn, Tuce Tombaz, V P T N C Srikanth Bojja, Jonathan R Whitlock. Science 2018
18
Automated markerless pose estimation in freely moving macaques with OpenMonkeyStudio.
Praneet C Bala, Benjamin R Eisenreich, Seng Bum Michael Yoo, Benjamin Y Hayden, Hyun Soo Park, Jan Zimmermann. Nat Commun 2020
Praneet C Bala, Benjamin R Eisenreich, Seng Bum Michael Yoo, Benjamin Y Hayden, Hyun Soo Park, Jan Zimmermann. Nat Commun 2020
46
Global brain dynamics embed the motor command sequence of Caenorhabditis elegans.
Saul Kato, Harris S Kaplan, Tina Schrödel, Susanne Skora, Theodore H Lindsay, Eviatar Yemini, Shawn Lockery, Manuel Zimmer. Cell 2015
Saul Kato, Harris S Kaplan, Tina Schrödel, Susanne Skora, Theodore H Lindsay, Eviatar Yemini, Shawn Lockery, Manuel Zimmer. Cell 2015
6
DeepBehavior: A Deep Learning Toolbox for Automated Analysis of Animal and Human Behavior Imaging Data.
Ahmet Arac, Pingping Zhao, Bruce H Dobkin, S Thomas Carmichael, Peyman Golshani. Front Syst Neurosci 2019
Ahmet Arac, Pingping Zhao, Bruce H Dobkin, S Thomas Carmichael, Peyman Golshani. Front Syst Neurosci 2019
31
Automated home-cage behavioural phenotyping of mice.
Hueihan Jhuang, Estibaliz Garrote, Jim Mutch, Xinlin Yu, Vinita Khilnani, Tomaso Poggio, Andrew D Steele, Thomas Serre. Nat Commun 2010
Hueihan Jhuang, Estibaliz Garrote, Jim Mutch, Xinlin Yu, Vinita Khilnani, Tomaso Poggio, Andrew D Steele, Thomas Serre. Nat Commun 2010
6
Imaging large-scale neural activity with cellular resolution in awake, mobile mice.
Daniel A Dombeck, Anton N Khabbaz, Forrest Collman, Thomas L Adelman, David W Tank. Neuron 2007
Daniel A Dombeck, Anton N Khabbaz, Forrest Collman, Thomas L Adelman, David W Tank. Neuron 2007
6
A dictionary of behavioral motifs reveals clusters of genes affecting Caenorhabditis elegans locomotion.
André E X Brown, Eviatar I Yemini, Laura J Grundy, Tadas Jucikas, William R Schafer. Proc Natl Acad Sci U S A 2013
André E X Brown, Eviatar I Yemini, Laura J Grundy, Tadas Jucikas, William R Schafer. Proc Natl Acad Sci U S A 2013
6
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