A citation-based method for searching scientific literature

Basil Johannes Greber, Stefan Gerhardy, Alexander Leitner, Marc Leibundgut, Michèle Salem, Daniel Boehringer, Nicolas Leulliot, Ruedi Aebersold, Vikram Govind Panse, Nenad Ban. Cell 2016
Times Cited: 64







List of co-cited articles
812 articles co-cited >1



Times Cited
  Times     Co-cited
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Diverse roles of assembly factors revealed by structures of late nuclear pre-60S ribosomes.
Shan Wu, Beril Tutuncuoglu, Kaige Yan, Hailey Brown, Yixiao Zhang, Dan Tan, Michael Gamalinda, Yi Yuan, Zhifei Li, Jelena Jakovljevic,[...]. Nature 2016
112
56

The structure of the eukaryotic ribosome at 3.0 Å resolution.
Adam Ben-Shem, Nicolas Garreau de Loubresse, Sergey Melnikov, Lasse Jenner, Gulnara Yusupova, Marat Yusupov. Science 2011
718
51

Cryo-EM structures of Arx1 and maturation factors Rei1 and Jjj1 bound to the 60S ribosomal subunit.
Basil J Greber, Daniel Boehringer, Christian Montellese, Nenad Ban. Nat Struct Mol Biol 2012
72
48

Ribosome biogenesis in the yeast Saccharomyces cerevisiae.
John L Woolford, Susan J Baserga. Genetics 2013
431
43

Structural snapshot of cytoplasmic pre-60S ribosomal particles bound by Nmd3, Lsg1, Tif6 and Reh1.
Chengying Ma, Shan Wu, Ningning Li, Yan Chen, Kaige Yan, Zhifei Li, Lvqin Zheng, Jianlin Lei, John L Woolford, Ning Gao. Nat Struct Mol Biol 2017
50
54

60S ribosome biogenesis requires rotation of the 5S ribonucleoprotein particle.
Christoph Leidig, Matthias Thoms, Iris Holdermann, Bettina Bradatsch, Otto Berninghausen, Gert Bange, Irmgard Sinning, Ed Hurt, Roland Beckmann. Nat Commun 2014
89
40

Architecture of the Rix1-Rea1 checkpoint machinery during pre-60S-ribosome remodeling.
Clara Barrio-Garcia, Matthias Thoms, Dirk Flemming, Lukas Kater, Otto Berninghausen, Jochen Baßler, Roland Beckmann, Ed Hurt. Nat Struct Mol Biol 2016
66
40

Mechanism of eIF6 release from the nascent 60S ribosomal subunit.
Félix Weis, Emmanuel Giudice, Mark Churcher, Li Jin, Christine Hilcenko, Chi C Wong, David Traynor, Robert R Kay, Alan J Warren. Nat Struct Mol Biol 2015
105
39

Defining the pathway of cytoplasmic maturation of the 60S ribosomal subunit.
Kai-Yin Lo, Zhihua Li, Cyril Bussiere, Stefan Bresson, Edward M Marcotte, Arlen W Johnson. Mol Cell 2010
132
37

Coupled GTPase and remodelling ATPase activities form a checkpoint for ribosome export.
Yoshitaka Matsuo, Sander Granneman, Matthias Thoms, Rizos-Georgios Manikas, David Tollervey, Ed Hurt. Nature 2014
90
35

Structure of the pre-60S ribosomal subunit with nuclear export factor Arx1 bound at the exit tunnel.
Bettina Bradatsch, Christoph Leidig, Sander Granneman, Marén Gnädig, David Tollervey, Bettina Böttcher, Roland Beckmann, Ed Hurt. Nat Struct Mol Biol 2012
85
35

Architecture of the 90S Pre-ribosome: A Structural View on the Birth of the Eukaryotic Ribosome.
Markus Kornprobst, Martin Turk, Nikola Kellner, Jingdong Cheng, Dirk Flemming, Isabelle Koš-Braun, Martin Koš, Matthias Thoms, Otto Berninghausen, Roland Beckmann,[...]. Cell 2016
115
34

UCSF Chimera--a visualization system for exploratory research and analysis.
Eric F Pettersen, Thomas D Goddard, Conrad C Huang, Gregory S Couch, Daniel M Greenblatt, Elaine C Meng, Thomas E Ferrin. J Comput Chem 2004
32

90S pre-ribosomes include the 35S pre-rRNA, the U3 snoRNP, and 40S subunit processing factors but predominantly lack 60S synthesis factors.
Paola Grandi, Vladimir Rybin, Jochen Bassler, Elisabeth Petfalski, Daniela Strauss, Martina Marzioch, Thorsten Schäfer, Bernhard Kuster, Herbert Tschochner, David Tollervey,[...]. Mol Cell 2002
367
29

Nmd3 is a structural mimic of eIF5A, and activates the cpGTPase Lsg1 during 60S ribosome biogenesis.
Andrey G Malyutin, Sharmishtha Musalgaonkar, Stephanie Patchett, Joachim Frank, Arlen W Johnson. EMBO J 2017
44
40

The cytosolic J-protein, Jjj1, and Rei1 function in the removal of the pre-60 S subunit factor Arx1.
Alison E Meyer, Lindsey A Hoover, Elizabeth A Craig. J Biol Chem 2010
41
41

A large nucleolar U3 ribonucleoprotein required for 18S ribosomal RNA biogenesis.
François Dragon, Jennifer E G Gallagher, Patricia A Compagnone-Post, Brianna M Mitchell, Kara A Porwancher, Karen A Wehner, Steven Wormsley, Robert E Settlage, Jeffrey Shabanowitz, Yvonne Osheim,[...]. Nature 2002
517
26

Visualizing the Assembly Pathway of Nucleolar Pre-60S Ribosomes.
Lukas Kater, Matthias Thoms, Clara Barrio-Garcia, Jingdong Cheng, Sherif Ismail, Yasar Luqman Ahmed, Gert Bange, Dieter Kressler, Otto Berninghausen, Irmgard Sinning,[...]. Cell 2017
70
26

Rlp24 activates the AAA-ATPase Drg1 to initiate cytoplasmic pre-60S maturation.
Lisa Kappel, Mathias Loibl, Gertrude Zisser, Isabella Klein, Gernot Fruhmann, Christof Gruber, Stefan Unterweger, Gerald Rechberger, Brigitte Pertschy, Helmut Bergler. J Cell Biol 2012
42
38

Functions of ribosomal proteins in assembly of eukaryotic ribosomes in vivo.
Jesus de la Cruz, Katrin Karbstein, John L Woolford. Annu Rev Biochem 2015
175
25

Crystal structure of the eukaryotic 60S ribosomal subunit in complex with initiation factor 6.
Sebastian Klinge, Felix Voigts-Hoffmann, Marc Leibundgut, Sofia Arpagaus, Nenad Ban. Science 2011
243
23

The Exosome Is Recruited to RNA Substrates through Specific Adaptor Proteins.
Matthias Thoms, Emma Thomson, Jochen Baßler, Marén Gnädig, Sabine Griesel, Ed Hurt. Cell 2015
112
23

A new system for naming ribosomal proteins.
Nenad Ban, Roland Beckmann, Jamie H D Cate, Jonathan D Dinman, François Dragon, Steven R Ellis, Denis L J Lafontaine, Lasse Lindahl, Anders Liljas, Jeffrey M Lipton,[...]. Curr Opin Struct Biol 2014
322
23

Arx1 functions as an unorthodox nuclear export receptor for the 60S preribosomal subunit.
Bettina Bradatsch, Jun Katahira, Eva Kowalinski, Gert Bange, Wei Yao, Toshihiro Sekimoto, Viola Baumgärtel, Guido Boese, Jochen Bassler, Klemens Wild,[...]. Mol Cell 2007
93
23

A hierarchical model for assembly of eukaryotic 60S ribosomal subunit domains.
Michael Gamalinda, Uli Ohmayer, Jelena Jakovljevic, Beril Kumcuoglu, Joshua Woolford, Bertrade Mbom, Lawrence Lin, John L Woolford. Genes Dev 2014
77
23

PHENIX: a comprehensive Python-based system for macromolecular structure solution.
Paul D Adams, Pavel V Afonine, Gábor Bunkóczi, Vincent B Chen, Ian W Davis, Nathaniel Echols, Jeffrey J Headd, Li-Wei Hung, Gary J Kapral, Ralf W Grosse-Kunstleve,[...]. Acta Crystallogr D Biol Crystallogr 2010
21

Cytoplasmic recycling of 60S preribosomal factors depends on the AAA protein Drg1.
Brigitte Pertschy, Cosmin Saveanu, Gertrude Zisser, Alice Lebreton, Martin Tengg, Alain Jacquier, Eva Liebminger, Berthold Nobis, Lisa Kappel, Ida van der Klei,[...]. Mol Cell Biol 2007
72
21

Chaperoning 5S RNA assembly.
Clément Madru, Simon Lebaron, Magali Blaud, Lila Delbos, Juliana Pipoli, Eric Pasmant, Stéphane Réty, Nicolas Leulliot. Genes Dev 2015
35
40

Features and development of Coot.
P Emsley, B Lohkamp, W G Scott, K Cowtan. Acta Crystallogr D Biol Crystallogr 2010
21

Processing of preribosomal RNA in Saccharomyces cerevisiae.
Antonio Fernández-Pevida, Dieter Kressler, Jesús de la Cruz. Wiley Interdiscip Rev RNA 2015
57
24


A functional network involved in the recycling of nucleocytoplasmic pre-60S factors.
Alice Lebreton, Cosmin Saveanu, Laurence Decourty, Jean-Christophe Rain, Alain Jacquier, Micheline Fromont-Racine. J Cell Biol 2006
85
21

Molecular architecture of the 90S small subunit pre-ribosome.
Qi Sun, Xing Zhu, Jia Qi, Weidong An, Pengfei Lan, Dan Tan, Rongchang Chen, Bing Wang, Sanduo Zheng, Cheng Zhang,[...]. Elife 2017
85
21

Hierarchical recruitment into nascent ribosomes of assembly factors required for 27SB pre-rRNA processing in Saccharomyces cerevisiae.
Jason Talkish, Jingyu Zhang, Jelena Jakovljevic, Edward W Horsey, John L Woolford. Nucleic Acids Res 2012
46
28

Maturation of eukaryotic ribosomes: acquisition of functionality.
Vikram Govind Panse, Arlen W Johnson. Trends Biochem Sci 2010
141
20

Assembly factors Rpf2 and Rrs1 recruit 5S rRNA and ribosomal proteins rpL5 and rpL11 into nascent ribosomes.
Jingyu Zhang, Piyanun Harnpicharnchai, Jelena Jakovljevic, Lan Tang, Yurong Guo, Marlene Oeffinger, Michael P Rout, Shawna L Hiley, Timothy Hughes, John L Woolford. Genes Dev 2007
138
20



Driving ribosome assembly.
Dieter Kressler, Ed Hurt, Jochen Bassler. Biochim Biophys Acta 2010
332
20

Yvh1 is required for a late maturation step in the 60S biogenesis pathway.
Stefan Kemmler, Laura Occhipinti, Maria Veisu, Vikram Govind Panse. J Cell Biol 2009
80
20


Stage-specific assembly events of the 6-MDa small-subunit processome initiate eukaryotic ribosome biogenesis.
Malik Chaker-Margot, Mirjam Hunziker, Jonas Barandun, Brian D Dill, Sebastian Klinge. Nat Struct Mol Biol 2015
68
20

Targeted proteomics reveals compositional dynamics of 60S pre-ribosomes after nuclear export.
Martin Altvater, Yiming Chang, Andre Melnik, Laura Occhipinti, Sabina Schütz, Ute Rothenbusch, Paola Picotti, Vikram Govind Panse. Mol Syst Biol 2012
37
35

One core, two shells: bacterial and eukaryotic ribosomes.
Sergey Melnikov, Adam Ben-Shem, Nicolas Garreau de Loubresse, Lasse Jenner, Gulnara Yusupova, Marat Yusupov. Nat Struct Mol Biol 2012
225
20

Architecture of the yeast small subunit processome.
Malik Chaker-Margot, Jonas Barandun, Mirjam Hunziker, Sebastian Klinge. Science 2017
80
20

The structure of Rpf2-Rrs1 explains its role in ribosome biogenesis.
Satyavati Kharde, Fabiola R Calviño, Andrea Gumiero, Klemens Wild, Irmgard Sinning. Nucleic Acids Res 2015
32
37

Mechanochemical removal of ribosome biogenesis factors from nascent 60S ribosomal subunits.
Cornelia Ulbrich, Meikel Diepholz, Jochen Bassler, Dieter Kressler, Brigitte Pertschy, Kyriaki Galani, Bettina Böttcher, Ed Hurt. Cell 2009
103
18

Ribosome assembly factors prevent premature translation initiation by 40S assembly intermediates.
Bethany S Strunk, Cherisse R Loucks, Min Su, Harish Vashisth, Shanshan Cheng, Justin Schilling, Charles L Brooks, Katrin Karbstein, Georgios Skiniotis. Science 2011
154
18

Stepwise and dynamic assembly of the earliest precursors of small ribosomal subunits in yeast.
Liman Zhang, Chen Wu, Gaihong Cai, She Chen, Keqiong Ye. Genes Dev 2016
68
18

Quality control mechanisms during ribosome maturation.
Katrin Karbstein. Trends Cell Biol 2013
81
18


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.