A citation-based method for searching scientific literature

Jonathan D Dinman. J Mol Biol 2016
Times Cited: 73







List of co-cited articles
847 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity



Heterogeneous Ribosomes Preferentially Translate Distinct Subpools of mRNAs Genome-wide.
Zhen Shi, Kotaro Fujii, Kyle M Kovary, Naomi R Genuth, Hannes L Röst, Mary N Teruel, Maria Barna. Mol Cell 2017
279
49

Ribosome-mediated specificity in Hox mRNA translation and vertebrate tissue patterning.
Nadya Kondrashov, Aya Pusic, Craig R Stumpf, Kunihiko Shimizu, Andrew C Hsieh, Junko Ishijima, Toshihiko Shiroishi, Maria Barna. Cell 2011
359
38

Ribosomopathies: There's strength in numbers.
Eric W Mills, Rachel Green. Science 2017
201
27


RNA regulons in Hox 5' UTRs confer ribosome specificity to gene regulation.
Shifeng Xue, Siqi Tian, Kotaro Fujii, Wipapat Kladwang, Rhiju Das, Maria Barna. Nature 2015
186
24

Functional specificity among ribosomal proteins regulates gene expression.
Suzanne Komili, Natalie G Farny, Frederick P Roth, Pamela A Silver. Cell 2007
246
24


The Mammalian Ribo-interactome Reveals Ribosome Functional Diversity and Heterogeneity.
Deniz Simsek, Gerald C Tiu, Ryan A Flynn, Gun W Byeon, Kathrin Leppek, Adele F Xu, Howard Y Chang, Maria Barna. Cell 2017
192
23

Ribosomopathies: human disorders of ribosome dysfunction.
Anupama Narla, Benjamin L Ebert. Blood 2010
508
21

Differential Stoichiometry among Core Ribosomal Proteins.
Nikolai Slavov, Stefan Semrau, Edoardo Airoldi, Bogdan Budnik, Alexander van Oudenaarden. Cell Rep 2015
108
21


Tuning the ribosome: The influence of rRNA modification on eukaryotic ribosome biogenesis and function.
Katherine E Sloan, Ahmed S Warda, Sunny Sharma, Karl-Dieter Entian, Denis L J Lafontaine, Markus T Bohnsack. RNA Biol 2017
265
21

Profiling of 2'-O-Me in human rRNA reveals a subset of fractionally modified positions and provides evidence for ribosome heterogeneity.
Nicolai Krogh, Martin D Jansson, Sophia J Häfner, Disa Tehler, Ulf Birkedal, Mikkel Christensen-Dalsgaard, Anders H Lund, Henrik Nielsen. Nucleic Acids Res 2016
132
20

'View From A Bridge': A New Perspective on Eukaryotic rRNA Base Modification.
Sunny Sharma, Denis L J Lafontaine. Trends Biochem Sci 2015
135
19

Impaired control of IRES-mediated translation in X-linked dyskeratosis congenita.
Andrew Yoon, Guang Peng, Yves Brandenburger, Ornella Zollo, Wei Xu, Eduardo Rego, Davide Ruggero. Science 2006
301
17

Genome-wide analysis in vivo of translation with nucleotide resolution using ribosome profiling.
Nicholas T Ingolia, Sina Ghaemmaghami, John R S Newman, Jonathan S Weissman. Science 2009
17

rRNA pseudouridylation defects affect ribosomal ligand binding and translational fidelity from yeast to human cells.
Karen Jack, Cristian Bellodi, Dori M Landry, Rachel O Niederer, Arturas Meskauskas, Sharmishtha Musalgaonkar, Noam Kopmar, Olya Krasnykh, Alison M Dean, Sunnie R Thompson,[...]. Mol Cell 2011
184
16

The ribosome filter hypothesis.
Vincent P Mauro, Gerald M Edelman. Proc Natl Acad Sci U S A 2002
181
16


The structure of the eukaryotic ribosome at 3.0 Å resolution.
Adam Ben-Shem, Nicolas Garreau de Loubresse, Sergey Melnikov, Lasse Jenner, Gulnara Yusupova, Marat Yusupov. Science 2011
752
15

Structural insights into the role of rRNA modifications in protein synthesis and ribosome assembly.
Yury S Polikanov, Sergey V Melnikov, Dieter Söll, Thomas A Steitz. Nat Struct Mol Biol 2015
132
15

Functional specialization of ribosomes?
Wendy V Gilbert. Trends Biochem Sci 2011
77
15

Ribosome Levels Selectively Regulate Translation and Lineage Commitment in Human Hematopoiesis.
Rajiv K Khajuria, Mathias Munschauer, Jacob C Ulirsch, Claudia Fiorini, Leif S Ludwig, Sean K McFarland, Nour J Abdulhay, Harrison Specht, Hasmik Keshishian, D R Mani,[...]. Cell 2018
173
15

Rps26 directs mRNA-specific translation by recognition of Kozak sequence elements.
Max B Ferretti, Homa Ghalei, Ethan A Ward, Elizabeth L Potts, Katrin Karbstein. Nat Struct Mol Biol 2017
60
18

Variant ribosomal RNA alleles are conserved and exhibit tissue-specific expression.
Matthew M Parks, Chad M Kurylo, Randall A Dass, Linda Bojmar, David Lyden, C Theresa Vincent, Scott C Blanchard. Sci Adv 2018
97
15

Exome sequencing identifies mutation in CNOT3 and ribosomal genes RPL5 and RPL10 in T-cell acute lymphoblastic leukemia.
Kim De Keersmaecker, Zeynep Kalender Atak, Ning Li, Carmen Vicente, Stephanie Patchett, Tiziana Girardi, Valentina Gianfelici, Ellen Geerdens, Emmanuelle Clappier, Michaël Porcu,[...]. Nat Genet 2013
275
13

How common are extraribosomal functions of ribosomal proteins?
Jonathan R Warner, Kerri B McIntosh. Mol Cell 2009
465
13


p53 acts as a safeguard of translational control by regulating fibrillarin and rRNA methylation in cancer.
Virginie Marcel, Sandra E Ghayad, Stéphane Belin, Gabriel Therizols, Anne-Pierre Morel, Eduardo Solano-Gonzàlez, Julie A Vendrell, Sabine Hacot, Hichem C Mertani, Marie Alexandra Albaret,[...]. Cancer Cell 2013
171
13

Inactivation of ribosomal protein L22 promotes transformation by induction of the stemness factor, Lin28B.
Shuyun Rao, Sang-Yun Lee, Alejandro Gutierrez, Jacqueline Perrigoue, Roshan J Thapa, Zhigang Tu, John R Jeffers, Michele Rhodes, Stephen Anderson, Tamas Oravecz,[...]. Blood 2012
101
13

The economics of ribosome biosynthesis in yeast.
J R Warner. Trends Biochem Sci 1999
13

Ribosome deficiency protects against ER stress in Saccharomyces cerevisiae.
Kristan K Steffen, Mark A McCormick, Kim M Pham, Vivian L MacKay, Joe R Delaney, Christopher J Murakami, Matt Kaeberlein, Brian K Kennedy. Genetics 2012
119
12

Structure of the human 80S ribosome.
Heena Khatter, Alexander G Myasnikov, S Kundhavai Natchiar, Bruno P Klaholz. Nature 2015
254
12

Methylation of ribosomal RNA by NSUN5 is a conserved mechanism modulating organismal lifespan.
Markus Schosserer, Nadege Minois, Tina B Angerer, Manuela Amring, Hanna Dellago, Eva Harreither, Alfonso Calle-Perez, Andreas Pircher, Matthias Peter Gerstl, Sigrid Pfeifenberger,[...]. Nat Commun 2015
136
12


How Ribosomes Translate Cancer.
Sergey O Sulima, Isabel J F Hofman, Kim De Keersmaecker, Jonathan D Dinman. Cancer Discov 2017
85
12


Ribosomopathies and the paradox of cellular hypo- to hyperproliferation.
Kim De Keersmaecker, Sergey O Sulima, Jonathan D Dinman. Blood 2015
57
14

The complexity of human ribosome biogenesis revealed by systematic nucleolar screening of Pre-rRNA processing factors.
Lionel Tafforeau, Christiane Zorbas, Jean-Louis Langhendries, Sahra-Taylor Mullineux, Vassiliki Stamatopoulou, Romain Mullier, Ludivine Wacheul, Denis L J Lafontaine. Mol Cell 2013
270
10

Ribosomal protein L5 and L11 mutations are associated with cleft palate and abnormal thumbs in Diamond-Blackfan anemia patients.
Hanna T Gazda, Mee Rie Sheen, Adrianna Vlachos, Valerie Choesmel, Marie-Françoise O'Donohue, Hal Schneider, Natasha Darras, Catherine Hasman, Colin A Sieff, Peter E Newburger,[...]. Am J Hum Genet 2008
292
10

Genetics. Mysterious ribosomopathies.
Kathleen L McCann, Susan J Baserga. Science 2013
83
10

The ribosomal basis of Diamond-Blackfan Anemia: mutation and database update.
Ilenia Boria, Emanuela Garelli, Hanna T Gazda, Anna Aspesi, Paola Quarello, Elisa Pavesi, Daniela Ferrante, Joerg J Meerpohl, Mutlu Kartal, Lydie Da Costa,[...]. Hum Mutat 2010
155
10

Yeast life span extension by depletion of 60s ribosomal subunits is mediated by Gcn4.
Kristan K Steffen, Vivian L MacKay, Emily O Kerr, Mitsuhiro Tsuchiya, Di Hu, Lindsay A Fox, Nick Dang, Elijah D Johnston, Jonathan A Oakes, Bie N Tchao,[...]. Cell 2008
323
10

Nucleotide modifications in three functionally important regions of the Saccharomyces cerevisiae ribosome affect translation accuracy.
Agnès Baudin-Baillieu, Céline Fabret, Xue-Hai Liang, Dorota Piekna-Przybylska, Maurille J Fournier, Jean-Pierre Rousset. Nucleic Acids Res 2009
93
10

Noncoding RNAs in eukaryotic ribosome biogenesis and function.
Denis L J Lafontaine. Nat Struct Mol Biol 2015
152
10

The structure and function of the eukaryotic ribosome.
Daniel N Wilson, Jamie H Doudna Cate. Cold Spring Harb Perspect Biol 2012
182
10



Altered translation of GATA1 in Diamond-Blackfan anemia.
Leif S Ludwig, Hanna T Gazda, Jennifer C Eng, Stephen W Eichhorn, Prathapan Thiru, Roxanne Ghazvinian, Tracy I George, Jason R Gotlib, Alan H Beggs, Colin A Sieff,[...]. Nat Med 2014
180
10


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.