A citation-based method for searching scientific literature

Sean Simmons, Bonnie Berger. Bioinformatics 2016
Times Cited: 15







List of co-cited articles
73 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Resolving individuals contributing trace amounts of DNA to highly complex mixtures using high-density SNP genotyping microarrays.
Nils Homer, Szabolcs Szelinger, Margot Redman, David Duggan, Waibhav Tembe, Jill Muehling, John V Pearson, Dietrich A Stephan, Stanley F Nelson, David W Craig. PLoS Genet 2008
451
80

Identifying personal genomes by surname inference.
Melissa Gymrek, Amy L McGuire, David Golan, Eran Halperin, Yaniv Erlich. Science 2013
475
73

Scalable privacy-preserving data sharing methodology for genome-wide association studies.
Fei Yu, Stephen E Fienberg, Aleksandra B Slavković, Caroline Uhler. J Biomed Inform 2014
27
66

Privacy-Preserving Data Sharing for Genome-Wide Association Studies.
Caroline Uhlerop, Aleksandra Slavković, Stephen E Fienberg. J Priv Confid 2013
21
60


Privacy Risks from Genomic Data-Sharing Beacons.
Suyash S Shringarpure, Carlos D Bustamante. Am J Hum Genet 2015
80
53

Routes for breaching and protecting genetic privacy.
Yaniv Erlich, Arvind Narayanan. Nat Rev Genet 2014
143
53

A new way to protect privacy in large-scale genome-wide association studies.
Liina Kamm, Dan Bogdanov, Sven Laur, Jaak Vilo. Bioinformatics 2013
35
53

HEALER: homomorphic computation of ExAct Logistic rEgRession for secure rare disease variants analysis in GWAS.
Shuang Wang, Yuchen Zhang, Wenrui Dai, Kristin Lauter, Miran Kim, Yuzhe Tang, Hongkai Xiong, Xiaoqian Jiang. Bioinformatics 2016
40
46

Enabling Privacy-Preserving GWASs in Heterogeneous Human Populations.
Sean Simmons, Cenk Sahinalp, Bonnie Berger. Cell Syst 2016
18
46


Privacy in the Genomic Era.
Muhammad Naveed, Erman Ayday, Ellen W Clayton, Jacques Fellay, Carl A Gunter, Jean-Pierre Hubaux, Bradley A Malin, Xiaofeng Wang. ACM Comput Surv 2015
58
40

PRINCESS: Privacy-protecting Rare disease International Network Collaboration via Encryption through Software guard extensionS.
Feng Chen, Shuang Wang, Xiaoqian Jiang, Sijie Ding, Yao Lu, Jihoon Kim, S Cenk Sahinalp, Chisato Shimizu, Jane C Burns, Victoria J Wright,[...]. Bioinformatics 2017
36
40

FORESEE: Fully Outsourced secuRe gEnome Study basEd on homomorphic Encryption.
Yuchen Zhang, Wenrui Dai, Xiaoqian Jiang, Hongkai Xiong, Shuang Wang. BMC Med Inform Decis Mak 2015
21
40

Privacy in Pharmacogenetics: An End-to-End Case Study of Personalized Warfarin Dosing.
Matthew Fredrikson, Eric Lantz, Somesh Jha, Simon Lin, David Page, Thomas Ristenpart. Proc USENIX Secur Symp 2014
19
33

Secure management of biomedical data with cryptographic hardware.
Mustafa Canim, Murat Kantarcioglu, Bradley Malin. IEEE Trans Inf Technol Biomed 2012
15
33

Protecting count queries in study design.
Staal A Vinterbo, Anand D Sarwate, Aziz A Boxwala. J Am Med Inform Assoc 2012
15
26

Genomic privacy and limits of individual detection in a pool.
Sriram Sankararaman, Guillaume Obozinski, Michael I Jordan, Eran Halperin. Nat Genet 2009
68
26

A community assessment of privacy preserving techniques for human genomes.
Xiaoqian Jiang, Yongan Zhao, Xiaofeng Wang, Bradley Malin, Shuang Wang, Lucila Ohno-Machado, Haixu Tang. BMC Med Inform Decis Mak 2014
28
26

SecureMA: protecting participant privacy in genetic association meta-analysis.
Wei Xie, Murat Kantarcioglu, William S Bush, Dana Crawford, Joshua C Denny, Raymond Heatherly, Bradley A Malin. Bioinformatics 2014
19
26

A cryptographic approach to securely share and query genomic sequences.
Murat Kantarcioglu, Wei Jiang, Ying Liu, Bradley Malin. IEEE Trans Inf Technol Biomed 2008
26
26

Genome privacy: challenges, technical approaches to mitigate risk, and ethical considerations in the United States.
Shuang Wang, Xiaoqian Jiang, Siddharth Singh, Rebecca Marmor, Luca Bonomi, Dov Fox, Michelle Dow, Lucila Ohno-Machado. Ann N Y Acad Sci 2017
22
26

Privacy-preserving GWAS analysis on federated genomic datasets.
Scott D Constable, Yuzhe Tang, Shuang Wang, Xiaoqian Jiang, Steve Chapin. BMC Med Inform Decis Mak 2015
19
26

Identification of individuals by trait prediction using whole-genome sequencing data.
Christoph Lippert, Riccardo Sabatini, M Cyrus Maher, Eun Yong Kang, Seunghak Lee, Okan Arikan, Alena Harley, Axel Bernal, Peter Garst, Victor Lavrenko,[...]. Proc Natl Acad Sci U S A 2017
47
26

Identifying genetic relatives without compromising privacy.
Dan He, Nicholas A Furlotte, Farhad Hormozdiari, Jong Wha J Joo, Akshay Wadia, Rafail Ostrovsky, Amit Sahai, Eleazar Eskin. Genome Res 2014
19
20

One Size Doesn't Fit All: Measuring Individual Privacy in Aggregate Genomic Data.
Sean Simmons, Bonnie Berger. Proc IEEE Symp Secur Priv Workshops 2015
4
75

Strategies for maintaining patient privacy in i2b2.
Shawn N Murphy, Vivian Gainer, Michael Mendis, Susanne Churchill, Isaac Kohane. J Am Med Inform Assoc 2011
35
20

Genetics. Genomic research and human subject privacy.
Zhen Lin, Art B Owen, Russ B Altman. Science 2004
181
20

Differentially private genome data dissemination through top-down specialization.
Shuang Wang, Noman Mohammed, Rui Chen. BMC Med Inform Decis Mak 2014
16
20


Private and Efficient Query Processing on Outsourced Genomic Databases.
Reza Ghasemi, Md Momin Al Aziz, Noman Mohammed, Massoud Hadian Dehkordi, Xiaoqian Jiang. IEEE J Biomed Health Inform 2017
7
42

Privacy preserving processing of genomic data: A survey.
Mete Akgün, A Osman Bayrak, Bugra Ozer, M Şamil Sağıroğlu. J Biomed Inform 2015
11
27

Efficient and secure outsourcing of genomic data storage.
João Sá Sousa, Cédric Lefebvre, Zhicong Huang, Jean Louis Raisaro, Carlos Aguilar-Melchor, Marc-Olivier Killijian, Jean-Pierre Hubaux. BMC Med Genomics 2017
7
42


Deriving genomic diagnoses without revealing patient genomes.
Karthik A Jagadeesh, David J Wu, Johannes A Birgmeier, Dan Boneh, Gill Bejerano. Science 2017
32
20

Re-identification of familial database records.
Bradley Malin. AMIA Annu Symp Proc 2006
24
20


Private genome analysis through homomorphic encryption.
Miran Kim, Kristin Lauter. BMC Med Inform Decis Mak 2015
22
20

Secure genome-wide association analysis using multiparty computation.
Hyunghoon Cho, David J Wu, Bonnie Berger. Nat Biotechnol 2018
31
20

Protecting genomic data analytics in the cloud: state of the art and opportunities.
Haixu Tang, Xiaoqian Jiang, Xiaofeng Wang, Shuang Wang, Heidi Sofia, Dov Fox, Kristin Lauter, Bradley Malin, Amalio Telenti, Li Xiong,[...]. BMC Med Genomics 2016
17
20

On sharing quantitative trait GWAS results in an era of multiple-omics data and the limits of genomic privacy.
Hae Kyung Im, Eric R Gamazon, Dan L Nicolae, Nancy J Cox. Am J Hum Genet 2012
50
13

Choosing blindly but wisely: differentially private solicitation of DNA datasets for disease marker discovery.
Yongan Zhao, Xiaofeng Wang, Xiaoqian Jiang, Lucila Ohno-Machado, Haixu Tang. J Am Med Inform Assoc 2015
12
16

Principal components analysis corrects for stratification in genome-wide association studies.
Alkes L Price, Nick J Patterson, Robert M Plenge, Michael E Weinblatt, Nancy A Shadick, David Reich. Nat Genet 2006
13


TRAF1-C5 as a risk locus for rheumatoid arthritis--a genomewide study.
Robert M Plenge, Mark Seielstad, Leonid Padyukov, Annette T Lee, Elaine F Remmers, Bo Ding, Anthony Liew, Houman Khalili, Alamelu Chandrasekaran, Leela R L Davies,[...]. N Engl J Med 2007
630
13

PLINK: a tool set for whole-genome association and population-based linkage analyses.
Shaun Purcell, Benjamin Neale, Kathe Todd-Brown, Lori Thomas, Manuel A R Ferreira, David Bender, Julian Maller, Pamela Sklar, Paul I W de Bakker, Mark J Daly,[...]. Am J Hum Genet 2007
13

On Jim Watson's APOE status: genetic information is hard to hide.
Dale R Nyholt, Chang-En Yu, Peter M Visscher. Eur J Hum Genet 2009
51
13

A new statistic and its power to infer membership in a genome-wide association study using genotype frequencies.
Kevin B Jacobs, Meredith Yeager, Sholom Wacholder, David Craig, Peter Kraft, David J Hunter, Justin Paschal, Teri A Manolio, Margaret Tucker, Robert N Hoover,[...]. Nat Genet 2009
55
13

Expanding Access to Large-Scale Genomic Data While Promoting Privacy: A Game Theoretic Approach.
Zhiyu Wan, Yevgeniy Vorobeychik, Weiyi Xia, Ellen Wright Clayton, Murat Kantarcioglu, Bradley Malin. Am J Hum Genet 2017
15
13



Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.