A citation-based method for searching scientific literature

Jason Homsy, Samir Zaidi, Yufeng Shen, James S Ware, Kaitlin E Samocha, Konrad J Karczewski, Steven R DePalma, David McKean, Hiroko Wakimoto, Josh Gorham, Sheng Chih Jin, John Deanfield, Alessandro Giardini, George A Porter, Richard Kim, Kaya Bilguvar, Francesc López-Giráldez, Irina Tikhonova, Shrikant Mane, Angela Romano-Adesman, Hongjian Qi, Badri Vardarajan, Lijiang Ma, Mark Daly, Amy E Roberts, Mark W Russell, Seema Mital, Jane W Newburger, J William Gaynor, Roger E Breitbart, Ivan Iossifov, Michael Ronemus, Stephan J Sanders, Jonathan R Kaltman, Jonathan G Seidman, Martina Brueckner, Bruce D Gelb, Elizabeth Goldmuntz, Richard P Lifton, Christine E Seidman, Wendy K Chung. Science 2015
Times Cited: 331







List of co-cited articles
789 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Contribution of rare inherited and de novo variants in 2,871 congenital heart disease probands.
Sheng Chih Jin, Jason Homsy, Samir Zaidi, Qiongshi Lu, Sarah Morton, Steven R DePalma, Xue Zeng, Hongjian Qi, Weni Chang, Michael C Sierant,[...]. Nat Genet 2017
260
49

De novo mutations in histone-modifying genes in congenital heart disease.
Samir Zaidi, Murim Choi, Hiroko Wakimoto, Lijiang Ma, Jianming Jiang, John D Overton, Angela Romano-Adesman, Robert D Bjornson, Roger E Breitbart, Kerry K Brown,[...]. Nature 2013
517
37

Distinct genetic architectures for syndromic and nonsyndromic congenital heart defects identified by exome sequencing.
Alejandro Sifrim, Marc-Phillip Hitz, Anna Wilsdon, Jeroen Breckpot, Saeed H Al Turki, Bernard Thienpont, Jeremy McRae, Tomas W Fitzgerald, Tarjinder Singh, Ganesh Jawahar Swaminathan,[...]. Nat Genet 2016
154
23

Genetic Basis for Congenital Heart Disease: Revisited: A Scientific Statement From the American Heart Association.
Mary Ella Pierpont, Martina Brueckner, Wendy K Chung, Vidu Garg, Ronald V Lacro, Amy L McGuire, Seema Mital, James R Priest, William T Pu, Amy Roberts,[...]. Circulation 2018
101
20

Analysis of protein-coding genetic variation in 60,706 humans.
Monkol Lek, Konrad J Karczewski, Eric V Minikel, Kaitlin E Samocha, Eric Banks, Timothy Fennell, Anne H O'Donnell-Luria, James S Ware, Andrew J Hill, Beryl B Cummings,[...]. Nature 2016
19

Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology.
Sue Richards, Nazneen Aziz, Sherri Bale, David Bick, Soma Das, Julie Gastier-Foster, Wayne W Grody, Madhuri Hegde, Elaine Lyon, Elaine Spector,[...]. Genet Med 2015
18


The contribution of de novo coding mutations to autism spectrum disorder.
Ivan Iossifov, Brian J O'Roak, Stephan J Sanders, Michael Ronemus, Niklas Krumm, Dan Levy, Holly A Stessman, Kali T Witherspoon, Laura Vives, Karynne E Patterson,[...]. Nature 2014
15

Genetics and Genomics of Congenital Heart Disease.
Samir Zaidi, Martina Brueckner. Circ Res 2017
140
14

The incidence of congenital heart disease.
Julien I E Hoffman, Samuel Kaplan. J Am Coll Cardiol 2002
13

Whole Exome Sequencing Reveals the Major Genetic Contributors to Nonsyndromic Tetralogy of Fallot.
Donna J Page, Matthieu J Miossec, Simon G Williams, Richard M Monaghan, Elisavet Fotiou, Heather J Cordell, Louise Sutcliffe, Ana Topf, Mathieu Bourgey, Guillaume Bourque,[...]. Circ Res 2019
45
24

Birth prevalence of congenital heart disease worldwide: a systematic review and meta-analysis.
Denise van der Linde, Elisabeth E M Konings, Maarten A Slager, Maarten Witsenburg, Willem A Helbing, Johanna J M Takkenberg, Jolien W Roos-Hesselink. J Am Coll Cardiol 2011
11

A framework for the interpretation of de novo mutation in human disease.
Kaitlin E Samocha, Elise B Robinson, Stephan J Sanders, Christine Stevens, Aniko Sabo, Lauren M McGrath, Jack A Kosmicki, Karola Rehnström, Swapan Mallick, Andrew Kirby,[...]. Nat Genet 2014
511
11

Congenital heart disease caused by mutations in the transcription factor NKX2-5.
J J Schott, D W Benson, C T Basson, W Pease, G M Silberbach, J P Moak, B J Maron, C E Seidman, J G Seidman. Science 1998
888
10

Recurrence of congenital heart defects in families.
Nina Øyen, Gry Poulsen, Heather A Boyd, Jan Wohlfahrt, Peter K A Jensen, Mads Melbye. Circulation 2009
182
10

GATA4 mutations cause human congenital heart defects and reveal an interaction with TBX5.
Vidu Garg, Irfan S Kathiriya, Robert Barnes, Marie K Schluterman, Isabelle N King, Cheryl A Butler, Caryn R Rothrock, Reenu S Eapen, Kayoko Hirayama-Yamada, Kunitaka Joo,[...]. Nature 2003
797
10

Synaptic, transcriptional and chromatin genes disrupted in autism.
Silvia De Rubeis, Xin He, Arthur P Goldberg, Christopher S Poultney, Kaitlin Samocha, A Erucment Cicek, Yan Kou, Li Liu, Menachem Fromer, Susan Walker,[...]. Nature 2014
10

De novo mutations in epileptic encephalopathies.
Andrew S Allen, Samuel F Berkovic, Patrick Cossette, Norman Delanty, Dennis Dlugos, Evan E Eichler, Michael P Epstein, Tracy Glauser, David B Goldstein, Yujun Han,[...]. Nature 2013
915
9

The Genome Analysis Toolkit: a MapReduce framework for analyzing next-generation DNA sequencing data.
Aaron McKenna, Matthew Hanna, Eric Banks, Andrey Sivachenko, Kristian Cibulskis, Andrew Kernytsky, Kiran Garimella, David Altshuler, Stacey Gabriel, Mark Daly,[...]. Genome Res 2010
9

The Congenital Heart Disease Genetic Network Study: rationale, design, and early results.
Bruce Gelb, Martina Brueckner, Wendy Chung, Elizabeth Goldmuntz, Jonathan Kaltman, Juan Pablo Kaski, Richard Kim, Jennie Kline, Laura Mercer-Rosa, George Porter,[...]. Circ Res 2013
88
10

A general framework for estimating the relative pathogenicity of human genetic variants.
Martin Kircher, Daniela M Witten, Preti Jain, Brian J O'Roak, Gregory M Cooper, Jay Shendure. Nat Genet 2014
9

Brain volume and metabolism in fetuses with congenital heart disease: evaluation with quantitative magnetic resonance imaging and spectroscopy.
Catherine Limperopoulos, Wayne Tworetzky, Doff B McElhinney, Jane W Newburger, David W Brown, Richard L Robertson, Nicolas Guizard, Ellen McGrath, Judith Geva, David Annese,[...]. Circulation 2010
340
8

The changing epidemiology of congenital heart disease.
Teun van der Bom, A Carla Zomer, Aeilko H Zwinderman, Folkert J Meijboom, Berto J Bouma, Barbara J M Mulder. Nat Rev Cardiol 2011
318
8

De novo variants in congenital diaphragmatic hernia identify MYRF as a new syndrome and reveal genetic overlaps with other developmental disorders.
Hongjian Qi, Lan Yu, Xueya Zhou, Julia Wynn, Haoquan Zhao, Yicheng Guo, Na Zhu, Alexander Kitaygorodsky, Rebecca Hernan, Gudrun Aspelund,[...]. PLoS Genet 2018
31
25

Neurodevelopmental outcomes in children with congenital heart disease: evaluation and management: a scientific statement from the American Heart Association.
Bradley S Marino, Paul H Lipkin, Jane W Newburger, Georgina Peacock, Marsha Gerdes, J William Gaynor, Kathleen A Mussatto, Karen Uzark, Caren S Goldberg, Walter H Johnson,[...]. Circulation 2012
652
8

De novo mutations in schizophrenia implicate synaptic networks.
Menachem Fromer, Andrew J Pocklington, David H Kavanagh, Hywel J Williams, Sarah Dwyer, Padhraig Gormley, Lyudmila Georgieva, Elliott Rees, Priit Palta, Douglas M Ruderfer,[...]. Nature 2014
955
8

Genetics of congenital heart disease: the glass half empty.
Akl C Fahed, Bruce D Gelb, J G Seidman, Christine E Seidman. Circ Res 2013
304
8

From FastQ data to high confidence variant calls: the Genome Analysis Toolkit best practices pipeline.
Geraldine A Van der Auwera, Mauricio O Carneiro, Christopher Hartl, Ryan Poplin, Guillermo Del Angel, Ami Levy-Moonshine, Tadeusz Jordan, Khalid Shakir, David Roazen, Joel Thibault,[...]. Curr Protoc Bioinformatics 2013
8

A Screening Approach to Identify Clinically Actionable Variants Causing Congenital Heart Disease in Exome Data.
Justin O Szot, Hartmut Cuny, Gillian M Blue, David T Humphreys, Eddie Ip, Katrina Harrison, Gary F Sholler, Eleni Giannoulatou, Paul Leo, Emma L Duncan,[...]. Circ Genom Precis Med 2018
32
21

Utilization of Whole Exome Sequencing to Identify Causative Mutations in Familial Congenital Heart Disease.
Stephanie LaHaye, Don Corsmeier, Madhumita Basu, Jessica L Bowman, Sara Fitzgerald-Butt, Gloria Zender, Kevin Bosse, Kim L McBride, Peter White, Vidu Garg. Circ Cardiovasc Genet 2016
36
19

Genetic basis for congenital heart defects: current knowledge: a scientific statement from the American Heart Association Congenital Cardiac Defects Committee, Council on Cardiovascular Disease in the Young: endorsed by the American Academy of Pediatrics.
Mary Ella Pierpont, Craig T Basson, D Woodrow Benson, Bruce D Gelb, Therese M Giglia, Elizabeth Goldmuntz, Glenn McGee, Craig A Sable, Deepak Srivastava, Catherine L Webb. Circulation 2007
527
7

Mutations in NOTCH1 cause aortic valve disease.
Vidu Garg, Alecia N Muth, Joshua F Ransom, Marie K Schluterman, Robert Barnes, Isabelle N King, Paul D Grossfeld, Deepak Srivastava. Nature 2005
897
7


Adolescents with d-transposition of the great arteries corrected with the arterial switch procedure: neuropsychological assessment and structural brain imaging.
David C Bellinger, David Wypij, Michael J Rivkin, David R DeMaso, Richard L Robertson, Carolyn Dunbar-Masterson, Leonard A Rappaport, Gil Wernovsky, Richard A Jonas, Jane W Newburger. Circulation 2011
255
7

Genome-wide association study of multiple congenital heart disease phenotypes identifies a susceptibility locus for atrial septal defect at chromosome 4p16.
Heather J Cordell, Jamie Bentham, Ana Topf, Diana Zelenika, Simon Heath, Chrysovalanto Mamasoula, Catherine Cosgrove, Gillian Blue, Javier Granados-Riveron, Kerry Setchfield,[...]. Nat Genet 2013
74
9

Genome-wide association study identifies loci on 12q24 and 13q32 associated with tetralogy of Fallot.
Heather J Cordell, Ana Töpf, Chrysovalanto Mamasoula, Alex V Postma, Jamie Bentham, Diana Zelenika, Simon Heath, Gillian Blue, Catherine Cosgrove, Javier Granados Riveron,[...]. Hum Mol Genet 2013
58
12

De novo mutations in human genetic disease.
Joris A Veltman, Han G Brunner. Nat Rev Genet 2012
437
7

ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data.
Kai Wang, Mingyao Li, Hakon Hakonarson. Nucleic Acids Res 2010
7

Haploinsufficiency of vascular endothelial growth factor related signaling genes is associated with tetralogy of Fallot.
Miriam S Reuter, Rebekah Jobling, Rajiv R Chaturvedi, Roozbeh Manshaei, Gregory Costain, Tracy Heung, Meredith Curtis, S Mohsen Hosseini, Eriskay Liston, Chelsea Lowther,[...]. Genet Med 2019
25
28

Genomic analyses implicate noncoding de novo variants in congenital heart disease.
Felix Richter, Sarah U Morton, Seong Won Kim, Alexander Kitaygorodsky, Lauren K Wasson, Kathleen M Chen, Jian Zhou, Hongjian Qi, Nihir Patel, Steven R DePalma,[...]. Nat Genet 2020
19
36

Contribution of global rare copy-number variants to the risk of sporadic congenital heart disease.
Rachel Soemedi, Ian J Wilson, Jamie Bentham, Rebecca Darlay, Ana Töpf, Diana Zelenika, Catherine Cosgrove, Kerry Setchfield, Chris Thornborough, Javier Granados-Riveron,[...]. Am J Hum Genet 2012
180
6

Delayed cortical development in fetuses with complex congenital heart disease.
C Clouchoux, A J du Plessis, M Bouyssi-Kobar, W Tworetzky, D B McElhinney, D W Brown, A Gholipour, D Kudelski, S K Warfield, R J McCarter,[...]. Cereb Cortex 2013
156
6

Inherited and multiple de novo mutations in autism/developmental delay risk genes suggest a multifactorial model.
Hui Guo, Tianyun Wang, Huidan Wu, Min Long, Bradley P Coe, Honghui Li, Guanglei Xun, Jianjun Ou, Biyuan Chen, Guiqin Duan,[...]. Mol Autism 2018
41
14

De novo genic mutations among a Chinese autism spectrum disorder cohort.
Tianyun Wang, Hui Guo, Bo Xiong, Holly A F Stessman, Huidan Wu, Bradley P Coe, Tychele N Turner, Yanling Liu, Wenjing Zhao, Kendra Hoekzema,[...]. Nat Commun 2016
147
6

CADD: predicting the deleteriousness of variants throughout the human genome.
Philipp Rentzsch, Daniela Witten, Gregory M Cooper, Jay Shendure, Martin Kircher. Nucleic Acids Res 2019
773
6

Complex genetics and the etiology of human congenital heart disease.
Bruce D Gelb, Wendy K Chung. Cold Spring Harb Perspect Med 2014
78
7

Global genetic analysis in mice unveils central role for cilia in congenital heart disease.
You Li, Nikolai T Klena, George C Gabriel, Xiaoqin Liu, Andrew J Kim, Kristi Lemke, Yu Chen, Bishwanath Chatterjee, William Devine, Rama Rao Damerla,[...]. Nature 2015
218
6

Increased frequency of de novo copy number variants in congenital heart disease by integrative analysis of single nucleotide polymorphism array and exome sequence data.
Joseph T Glessner, Alexander G Bick, Kaoru Ito, Jason Homsy, Laura Rodriguez-Murillo, Menachem Fromer, Erica Mazaika, Badri Vardarajan, Michael Italia, Jeremy Leipzig,[...]. Circ Res 2014
128
6

Submicroscopic chromosomal imbalances detected by array-CGH are a frequent cause of congenital heart defects in selected patients.
Bernard Thienpont, Luc Mertens, Thomy de Ravel, Benedicte Eyskens, Derize Boshoff, Nicole Maas, Jean-Pierre Fryns, Marc Gewillig, Joris R Vermeesch, Koen Devriendt. Eur Heart J 2007
133
6

Burden of potentially pathologic copy number variants is higher in children with isolated congenital heart disease and significantly impairs covariate-adjusted transplant-free survival.
Daniel Seung Kim, Jerry H Kim, Amber A Burt, David R Crosslin, Nancy Burnham, Cecilia E Kim, Donna M McDonald-McGinn, Elaine H Zackai, Susan C Nicolson, Thomas L Spray,[...]. J Thorac Cardiovasc Surg 2016
29
20


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.