A citation-based method for searching scientific literature

Chengying Ma, Kaige Yan, Dan Tan, Ningning Li, Yixiao Zhang, Yi Yuan, Zhifei Li, Meng-Qiu Dong, Jianlin Lei, Ning Gao. Protein Cell 2016
Times Cited: 8







List of co-cited articles
184 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Mechanism of eIF6 release from the nascent 60S ribosomal subunit.
Félix Weis, Emmanuel Giudice, Mark Churcher, Li Jin, Christine Hilcenko, Chi C Wong, David Traynor, Robert R Kay, Alan J Warren. Nat Struct Mol Biol 2015
105
87

Diverse roles of assembly factors revealed by structures of late nuclear pre-60S ribosomes.
Shan Wu, Beril Tutuncuoglu, Kaige Yan, Hailey Brown, Yixiao Zhang, Dan Tan, Michael Gamalinda, Yi Yuan, Zhifei Li, Jelena Jakovljevic,[...]. Nature 2016
112
87

Insertion of the Biogenesis Factor Rei1 Probes the Ribosomal Tunnel during 60S Maturation.
Basil Johannes Greber, Stefan Gerhardy, Alexander Leitner, Marc Leibundgut, Michèle Salem, Daniel Boehringer, Nicolas Leulliot, Ruedi Aebersold, Vikram Govind Panse, Nenad Ban. Cell 2016
64
75

The structure of the eukaryotic ribosome at 3.0 Å resolution.
Adam Ben-Shem, Nicolas Garreau de Loubresse, Sergey Melnikov, Lasse Jenner, Gulnara Yusupova, Marat Yusupov. Science 2011
718
75

60S ribosome biogenesis requires rotation of the 5S ribonucleoprotein particle.
Christoph Leidig, Matthias Thoms, Iris Holdermann, Bettina Bradatsch, Otto Berninghausen, Gert Bange, Irmgard Sinning, Ed Hurt, Roland Beckmann. Nat Commun 2014
89
75

Architecture of the Rix1-Rea1 checkpoint machinery during pre-60S-ribosome remodeling.
Clara Barrio-Garcia, Matthias Thoms, Dirk Flemming, Lukas Kater, Otto Berninghausen, Jochen Baßler, Roland Beckmann, Ed Hurt. Nat Struct Mol Biol 2016
66
75

Coupled GTPase and remodelling ATPase activities form a checkpoint for ribosome export.
Yoshitaka Matsuo, Sander Granneman, Matthias Thoms, Rizos-Georgios Manikas, David Tollervey, Ed Hurt. Nature 2014
90
75

Characterization of the nuclear export adaptor protein Nmd3 in association with the 60S ribosomal subunit.
Jayati Sengupta, Cyril Bussiere, Jesper Pallesen, Matthew West, Arlen W Johnson, Joachim Frank. J Cell Biol 2010
50
62

Processing of preribosomal RNA in Saccharomyces cerevisiae.
Antonio Fernández-Pevida, Dieter Kressler, Jesús de la Cruz. Wiley Interdiscip Rev RNA 2015
57
62

Ribosome biogenesis in the yeast Saccharomyces cerevisiae.
John L Woolford, Susan J Baserga. Genetics 2013
431
62

The Exosome Is Recruited to RNA Substrates through Specific Adaptor Proteins.
Matthias Thoms, Emma Thomson, Jochen Baßler, Marén Gnädig, Sabine Griesel, Ed Hurt. Cell 2015
112
62

Structure of the pre-60S ribosomal subunit with nuclear export factor Arx1 bound at the exit tunnel.
Bettina Bradatsch, Christoph Leidig, Sander Granneman, Marén Gnädig, David Tollervey, Bettina Böttcher, Roland Beckmann, Ed Hurt. Nat Struct Mol Biol 2012
85
62

Rlp24 activates the AAA-ATPase Drg1 to initiate cytoplasmic pre-60S maturation.
Lisa Kappel, Mathias Loibl, Gertrude Zisser, Isabella Klein, Gernot Fruhmann, Christof Gruber, Stefan Unterweger, Gerald Rechberger, Brigitte Pertschy, Helmut Bergler. J Cell Biol 2012
42
62

Maturation of eukaryotic ribosomes: acquisition of functionality.
Vikram Govind Panse, Arlen W Johnson. Trends Biochem Sci 2010
141
62

Nog2p, a putative GTPase associated with pre-60S subunits and required for late 60S maturation steps.
C Saveanu, D Bienvenu, A Namane, P E Gleizes, N Gas, A Jacquier, M Fromont-Racine. EMBO J 2001
151
50

UCSF Chimera--a visualization system for exploratory research and analysis.
Eric F Pettersen, Thomas D Goddard, Conrad C Huang, Gregory S Couch, Daniel M Greenblatt, Elaine C Meng, Thomas E Ferrin. J Comput Chem 2004
50

Cryo-EM structures of Arx1 and maturation factors Rei1 and Jjj1 bound to the 60S ribosomal subunit.
Basil J Greber, Daniel Boehringer, Christian Montellese, Nenad Ban. Nat Struct Mol Biol 2012
72
50

Ribosome assembly factors prevent premature translation initiation by 40S assembly intermediates.
Bethany S Strunk, Cherisse R Loucks, Min Su, Harish Vashisth, Shanshan Cheng, Justin Schilling, Charles L Brooks, Katrin Karbstein, Georgios Skiniotis. Science 2011
154
50



Ribosomopathies: how a common root can cause a tree of pathologies.
Nadia Danilova, Hanna T Gazda. Dis Model Mech 2015
98
50

Arx1 functions as an unorthodox nuclear export receptor for the 60S preribosomal subunit.
Bettina Bradatsch, Jun Katahira, Eva Kowalinski, Gert Bange, Wei Yao, Toshihiro Sekimoto, Viola Baumgärtel, Guido Boese, Jochen Bassler, Klemens Wild,[...]. Mol Cell 2007
93
50

The Shwachman-Bodian-Diamond syndrome protein mediates translational activation of ribosomes in yeast.
Tobias F Menne, Beatriz Goyenechea, Nuria Sánchez-Puig, Chi C Wong, Louise M Tonkin, Philip J Ancliff, Renée L Brost, Michael Costanzo, Charles Boone, Alan J Warren. Nat Genet 2007
225
50

Yvh1 is required for a late maturation step in the 60S biogenesis pathway.
Stefan Kemmler, Laura Occhipinti, Maria Veisu, Vikram Govind Panse. J Cell Biol 2009
80
50

A network of assembly factors is involved in remodeling rRNA elements during preribosome maturation.
Jochen Baßler, Helge Paternoga, Iris Holdermann, Matthias Thoms, Sander Granneman, Clara Barrio-Garcia, Afua Nyarko, Woonghee Lee, Gunter Stier, Sarah A Clark,[...]. J Cell Biol 2014
37
50

Co-translational capturing of nascent ribosomal proteins by their dedicated chaperones.
Patrick Pausch, Ujjwala Singh, Yasar Luqman Ahmed, Benjamin Pillet, Guillaume Murat, Florian Altegoer, Gunter Stier, Matthias Thoms, Ed Hurt, Irmgard Sinning,[...]. Nat Commun 2015
48
50


Stage-specific assembly events of the 6-MDa small-subunit processome initiate eukaryotic ribosome biogenesis.
Malik Chaker-Margot, Mirjam Hunziker, Jonas Barandun, Brian D Dill, Sebastian Klinge. Nat Struct Mol Biol 2015
68
50

Uncoupling of GTP hydrolysis from eIF6 release on the ribosome causes Shwachman-Diamond syndrome.
Andrew J Finch, Christine Hilcenko, Nicolas Basse, Lesley F Drynan, Beatriz Goyenechea, Tobias F Menne, Africa González Fernández, Paul Simpson, Clive S D'Santos, Mark J Arends,[...]. Genes Dev 2011
178
50

Integrity of the P-site is probed during maturation of the 60S ribosomal subunit.
Cyril Bussiere, Yaser Hashem, Sucheta Arora, Joachim Frank, Arlen W Johnson. J Cell Biol 2012
56
50


Stepwise and dynamic assembly of the earliest precursors of small ribosomal subunits in yeast.
Liman Zhang, Chen Wu, Gaihong Cai, She Chen, Keqiong Ye. Genes Dev 2016
68
50

Functions of ribosomal proteins in assembly of eukaryotic ribosomes in vivo.
Jesus de la Cruz, Katrin Karbstein, John L Woolford. Annu Rev Biochem 2015
175
50

A novel in vivo assay reveals inhibition of ribosomal nuclear export in ran-cycle and nucleoporin mutants.
E Hurt, S Hannus, B Schmelzl, D Lau, D Tollervey, G Simos. J Cell Biol 1999
137
50

Ribosome stalk assembly requires the dual-specificity phosphatase Yvh1 for the exchange of Mrt4 with P0.
Kai-Yin Lo, Zhihua Li, Feng Wang, Edward M Marcotte, Arlen W Johnson. J Cell Biol 2009
77
50

One core, two shells: bacterial and eukaryotic ribosomes.
Sergey Melnikov, Adam Ben-Shem, Nicolas Garreau de Loubresse, Lasse Jenner, Gulnara Yusupova, Marat Yusupov. Nat Struct Mol Biol 2012
225
50

Chaperoning 5S RNA assembly.
Clément Madru, Simon Lebaron, Magali Blaud, Lila Delbos, Juliana Pipoli, Eric Pasmant, Stéphane Réty, Nicolas Leulliot. Genes Dev 2015
35
50

Defining the pathway of cytoplasmic maturation of the 60S ribosomal subunit.
Kai-Yin Lo, Zhihua Li, Cyril Bussiere, Stefan Bresson, Edward M Marcotte, Arlen W Johnson. Mol Cell 2010
132
50

Crystal structure of the eukaryotic 60S ribosomal subunit in complex with initiation factor 6.
Sebastian Klinge, Felix Voigts-Hoffmann, Marc Leibundgut, Sofia Arpagaus, Nenad Ban. Science 2011
243
37

Interactions among Ytm1, Erb1, and Nop7 required for assembly of the Nop7-subcomplex in yeast preribosomes.
Lan Tang, Aarti Sahasranaman, Jelena Jakovljevic, Erica Schleifman, John L Woolford. Mol Biol Cell 2008
43
37

Ytm1, Nop7, and Erb1 form a complex necessary for maturation of yeast 66S preribosomes.
Tiffany D Miles, Jelena Jakovljevic, Edward W Horsey, Piyanun Harnpicharnchai, Lan Tang, John L Woolford. Mol Cell Biol 2005
74
37


Saccharomyces cerevisiae nucleolar protein Nop7p is necessary for biogenesis of 60S ribosomal subunits.
Cynthia C Adams, Jelena Jakovljevic, Judibelle Roman, Piyanun Harnpicharnchai, John L Woolford. RNA 2002
68
37

Yeast ribosomal protein L7 and its homologue Rlp7 are simultaneously present at distinct sites on pre-60S ribosomal particles.
Reyes Babiano, Gwenael Badis, Cosmin Saveanu, Abdelkader Namane, Antonia Doyen, Antonio Díaz-Quintana, Alain Jacquier, Micheline Fromont-Racine, Jesús de la Cruz. Nucleic Acids Res 2013
19
37

Identification of the binding site of Rlp7 on assembling 60S ribosomal subunits in Saccharomyces cerevisiae.
Jill A Dembowski, Madhumitha Ramesh, C Joel McManus, John L Woolford. RNA 2013
20
37

Features and development of Coot.
P Emsley, B Lohkamp, W G Scott, K Cowtan. Acta Crystallogr D Biol Crystallogr 2010
37

Architecture of the 90S Pre-ribosome: A Structural View on the Birth of the Eukaryotic Ribosome.
Markus Kornprobst, Martin Turk, Nikola Kellner, Jingdong Cheng, Dirk Flemming, Isabelle Koš-Braun, Martin Koš, Matthias Thoms, Otto Berninghausen, Roland Beckmann,[...]. Cell 2016
115
37

Assembly and nuclear export of pre-ribosomal particles in budding yeast.
Stefan Gerhardy, Anna Maria Menet, Cohue Peña, Janusz Jurand Petkowski, Vikram Govind Panse. Chromosoma 2014
37
37

Atomic structures of the eukaryotic ribosome.
Sebastian Klinge, Felix Voigts-Hoffmann, Marc Leibundgut, Nenad Ban. Trends Biochem Sci 2012
102
37

Ecm1 is a new pre-ribosomal factor involved in pre-60S particle export.
Yanhua Yao, Emilie Demoinet, Cosmin Saveanu, Pascal Lenormand, Alain Jacquier, Micheline Fromont-Racine. RNA 2010
29
37


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.