A citation-based method for searching scientific literature

Xiaoying Chen, Kunshan Zhang, Liqiang Zhou, Xinpei Gao, Junbang Wang, Yinan Yao, Fei He, Yuping Luo, Yongchun Yu, Siguang Li, Liming Cheng, Yi E Sun. Protein Cell 2016
Times Cited: 22







List of co-cited articles
153 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Electrophysiological, transcriptomic and morphologic profiling of single neurons using Patch-seq.
Cathryn R Cadwell, Athanasia Palasantza, Xiaolong Jiang, Philipp Berens, Qiaolin Deng, Marlene Yilmaz, Jacob Reimer, Shan Shen, Matthias Bethge, Kimberley F Tolias,[...]. Nat Biotechnol 2016
243
40

Integration of electrophysiological recordings with single-cell RNA-seq data identifies neuronal subtypes.
János Fuzik, Amit Zeisel, Zoltán Máté, Daniela Calvigioni, Yuchio Yanagawa, Gábor Szabó, Sten Linnarsson, Tibor Harkany. Nat Biotechnol 2016
203
40

Multimodal profiling of single-cell morphology, electrophysiology, and gene expression using Patch-seq.
Cathryn R Cadwell, Federico Scala, Shuang Li, Giulia Livrizzi, Shan Shen, Rickard Sandberg, Xiaolong Jiang, Andreas S Tolias. Nat Protoc 2017
50
36

Predicting the functional states of human iPSC-derived neurons with single-cell RNA-seq and electrophysiology.
C Bardy, M van den Hurk, B Kakaradov, J A Erwin, B N Jaeger, R V Hernandez, T Eames, A A Paucar, M Gorris, C Marchand,[...]. Mol Psychiatry 2016
78
36

Single-cell RNAseq reveals cell adhesion molecule profiles in electrophysiologically defined neurons.
Csaba Földy, Spyros Darmanis, Jason Aoto, Robert C Malenka, Stephen R Quake, Thomas C Südhof. Proc Natl Acad Sci U S A 2016
86
27

Induction of pluripotent stem cells from adult human fibroblasts by defined factors.
Kazutoshi Takahashi, Koji Tanabe, Mari Ohnuki, Megumi Narita, Tomoko Ichisaka, Kiichiro Tomoda, Shinya Yamanaka. Cell 2007
27

Cerebral organoids model human brain development and microcephaly.
Madeline A Lancaster, Magdalena Renner, Carol-Anne Martin, Daniel Wenzel, Louise S Bicknell, Matthew E Hurles, Tessa Homfray, Josef M Penninger, Andrew P Jackson, Juergen A Knoblich. Nature 2013
22

Fixed single-cell transcriptomic characterization of human radial glial diversity.
Elliot R Thomsen, John K Mich, Zizhen Yao, Rebecca D Hodge, Adele M Doyle, Sumin Jang, Soraya I Shehata, Angelique M Nelson, Nadiya V Shapovalova, Boaz P Levi,[...]. Nat Methods 2016
138
18

Correlation maps allow neuronal electrical properties to be predicted from single-cell gene expression profiles in rat neocortex.
Maria Toledo-Rodriguez, Barak Blumenfeld, Caizhi Wu, Junyi Luo, Bernard Attali, Philip Goodman, Henry Markram. Cereb Cortex 2004
174
18

Analysis of gene expression in single live neurons.
J Eberwine, H Yeh, K Miyashiro, Y Cao, S Nair, R Finnell, M Zettel, P Coleman. Proc Natl Acad Sci U S A 1992
714
18

Grouping and classifying electrophysiologically-defined classes of neocortical neurons by single cell, whole-genome expression profiling.
Tatiana Subkhankulova, Kojiro Yano, Hugh P C Robinson, Frederick J Livesey. Front Mol Neurosci 2010
23
18

Patch-Seq Protocol to Analyze the Electrophysiology, Morphology and Transcriptome of Whole Single Neurons Derived From Human Pluripotent Stem Cells.
Mark van den Hurk, Jennifer A Erwin, Gene W Yeo, Fred H Gage, Cedric Bardy. Front Mol Neurosci 2018
20
20

Integrating single-cell transcriptomic data across different conditions, technologies, and species.
Andrew Butler, Paul Hoffman, Peter Smibert, Efthymia Papalexi, Rahul Satija. Nat Biotechnol 2018
18

Functional maturation of hPSC-derived forebrain interneurons requires an extended timeline and mimics human neural development.
Cory R Nicholas, Jiadong Chen, Yunshuo Tang, Derek G Southwell, Nadine Chalmers, Daniel Vogt, Christine M Arnold, Ying-Jiun J Chen, Edouard G Stanley, Andrew G Elefanty,[...]. Cell Stem Cell 2013
352
18

Molecular Diversity of Midbrain Development in Mouse, Human, and Stem Cells.
Gioele La Manno, Daniel Gyllborg, Simone Codeluppi, Kaneyasu Nishimura, Carmen Salto, Amit Zeisel, Lars E Borm, Simon R W Stott, Enrique M Toledo, J Carlos Villaescusa,[...]. Cell 2016
349
18

Midbrain-like Organoids from Human Pluripotent Stem Cells Contain Functional Dopaminergic and Neuromelanin-Producing Neurons.
Junghyun Jo, Yixin Xiao, Alfred Xuyang Sun, Engin Cukuroglu, Hoang-Dai Tran, Jonathan Göke, Zi Ying Tan, Tzuen Yih Saw, Cheng-Peow Tan, Hidayat Lokman,[...]. Cell Stem Cell 2016
359
18


Derivation of Human Midbrain-Specific Organoids from Neuroepithelial Stem Cells.
Anna S Monzel, Lisa M Smits, Kathrin Hemmer, Siham Hachi, Edinson Lucumi Moreno, Thea van Wuellen, Javier Jarazo, Jonas Walter, Inga Brüggemann, Ibrahim Boussaad,[...]. Stem Cell Reports 2017
186
18

Genes and channels: patch/voltage-clamp analysis and single-cell RT-PCR.
N J Sucher, D L Deitcher, D J Baro, R M Warrick, E Guenther. Cell Tissue Res 2000
43
13

Directed dopaminergic neuron differentiation from human pluripotent stem cells.
Pengbo Zhang, Ninuo Xia, Renee A Reijo Pera. J Vis Exp 2014
35
13

Patch-clamp recordings and calcium imaging followed by single-cell PCR reveal the developmental profile of 13 genes in iPSC-derived human neurons.
Glenn S Belinsky, Matthew T Rich, Carissa L Sirois, Shaina M Short, Erika Pedrosa, Herbert M Lachman, Srdjan D Antic. Stem Cell Res 2014
35
13


Highly efficient neural conversion of human ES and iPS cells by dual inhibition of SMAD signaling.
Stuart M Chambers, Christopher A Fasano, Eirini P Papapetrou, Mark Tomishima, Michel Sadelain, Lorenz Studer. Nat Biotechnol 2009
13

AMPA receptor subunits expressed by single Purkinje cells.
B Lambolez, E Audinat, P Bochet, F Crépel, J Rossier. Neuron 1992
433
13

STAR: ultrafast universal RNA-seq aligner.
Alexander Dobin, Carrie A Davis, Felix Schlesinger, Jorg Drenkow, Chris Zaleski, Sonali Jha, Philippe Batut, Mark Chaisson, Thomas R Gingeras. Bioinformatics 2013
13

Brain structure. Cell types in the mouse cortex and hippocampus revealed by single-cell RNA-seq.
Amit Zeisel, Ana B Muñoz-Manchado, Simone Codeluppi, Peter Lönnerberg, Gioele La Manno, Anna Juréus, Sueli Marques, Hermany Munguba, Liqun He, Christer Betsholtz,[...]. Science 2015
13

A robust and high-throughput Cre reporting and characterization system for the whole mouse brain.
Linda Madisen, Theresa A Zwingman, Susan M Sunkin, Seung Wook Oh, Hatim A Zariwala, Hong Gu, Lydia L Ng, Richard D Palmiter, Michael J Hawrylycz, Allan R Jones,[...]. Nat Neurosci 2010
13

Embryonic stem cell lines derived from human blastocysts.
J A Thomson, J Itskovitz-Eldor, S S Shapiro, M A Waknitz, J J Swiergiel, V S Marshall, J M Jones. Science 1998
13

Medial ganglionic eminence-like cells derived from human embryonic stem cells correct learning and memory deficits.
Yan Liu, Jason P Weick, Huisheng Liu, Robert Krencik, Xiaoqing Zhang, Lixiang Ma, Guo-min Zhou, Melvin Ayala, Su-Chun Zhang. Nat Biotechnol 2013
162
13

Targeted Differentiation of Regional Ventral Neuroprogenitors and Related Neuronal Subtypes from Human Pluripotent Stem Cells.
Liankai Chi, Beibei Fan, Kunshan Zhang, Yanhua Du, Zhongliang Liu, Yujiang Fang, Zhenyu Chen, Xudong Ren, Xiangjie Xu, Cizhong Jiang,[...]. Stem Cell Reports 2016
14
21

The Transcriptional Regulator SnoN Promotes the Proliferation of Cerebellar Granule Neuron Precursors in the Postnatal Mouse Brain.
Xiaoying Chen, Ayan Chanda, Yoshiho Ikeuchi, Xiaoqing Zhang, Jared V Goodman, Naveen C Reddy, Shahriyar P Majidi, Dennis Y Wu, Sarah E Smith, Abigail Godec,[...]. J Neurosci 2019
8
37

An in vivo model of functional and vascularized human brain organoids.
Abed AlFatah Mansour, J Tiago Gonçalves, Cooper W Bloyd, Hao Li, Sarah Fernandes, Daphne Quang, Stephen Johnston, Sarah L Parylak, Xin Jin, Fred H Gage. Nat Biotechnol 2018
413
13

Human cerebral organoids recapitulate gene expression programs of fetal neocortex development.
J Gray Camp, Farhath Badsha, Marta Florio, Sabina Kanton, Tobias Gerber, Michaela Wilsch-Bräuninger, Eric Lewitus, Alex Sykes, Wulf Hevers, Madeline Lancaster,[...]. Proc Natl Acad Sci U S A 2015
487
13

Assembly of functionally integrated human forebrain spheroids.
Fikri Birey, Jimena Andersen, Christopher D Makinson, Saiful Islam, Wu Wei, Nina Huber, H Christina Fan, Kimberly R Cordes Metzler, Georgia Panagiotakos, Nicholas Thom,[...]. Nature 2017
503
13

Cell diversity and network dynamics in photosensitive human brain organoids.
Giorgia Quadrato, Tuan Nguyen, Evan Z Macosko, John L Sherwood, Sung Min Yang, Daniel R Berger, Natalie Maria, Jorg Scholvin, Melissa Goldman, Justin P Kinney,[...]. Nature 2017
521
13

Highly Parallel Genome-wide Expression Profiling of Individual Cells Using Nanoliter Droplets.
Evan Z Macosko, Anindita Basu, Rahul Satija, James Nemesh, Karthik Shekhar, Melissa Goldman, Itay Tirosh, Allison R Bialas, Nolan Kamitaki, Emily M Martersteck,[...]. Cell 2015
13

Comprehensive Integration of Single-Cell Data.
Tim Stuart, Andrew Butler, Paul Hoffman, Christoph Hafemeister, Efthymia Papalexi, William M Mauck, Yuhan Hao, Marlon Stoeckius, Peter Smibert, Rahul Satija. Cell 2019
13

Modeling Parkinson's disease in midbrain-like organoids.
Lisa M Smits, Lydia Reinhardt, Peter Reinhardt, Michael Glatza, Anna S Monzel, Nancy Stanslowsky, Marcelo D Rosato-Siri, Alessandra Zanon, Paul M Antony, Jessica Bellmann,[...]. NPJ Parkinsons Dis 2019
111
13

Millifluidic culture improves human midbrain organoid vitality and differentiation.
Emanuel Berger, Chiara Magliaro, Nicole Paczia, Anna S Monzel, Paul Antony, Carole L Linster, Silvia Bolognin, Arti Ahluwalia, Jens C Schwamborn. Lab Chip 2018
47
13

Modeling G2019S-LRRK2 Sporadic Parkinson's Disease in 3D Midbrain Organoids.
Hongwon Kim, Hyeok Ju Park, Hwan Choi, Yujung Chang, Hanseul Park, Jaein Shin, Junyeop Kim, Christopher J Lengner, Yong Kyu Lee, Jongpil Kim. Stem Cell Reports 2019
121
13

OSVZ progenitors of human and ferret neocortex are epithelial-like and expand by integrin signaling.
Simone A Fietz, Iva Kelava, Johannes Vogt, Michaela Wilsch-Bräuninger, Denise Stenzel, Jennifer L Fish, Denis Corbeil, Axel Riehn, Wolfgang Distler, Robert Nitsch,[...]. Nat Neurosci 2010
498
9

Chromatin regulation by BAF170 controls cerebral cortical size and thickness.
Tran Cong Tuoc, Susann Boretius, Stephen N Sansom, Mara-Elena Pitulescu, Jens Frahm, Frederick J Livesey, Anastassia Stoykova. Dev Cell 2013
106
9

Molecular identity of human outer radial glia during cortical development.
Alex A Pollen, Tomasz J Nowakowski, Jiadong Chen, Hanna Retallack, Carmen Sandoval-Espinosa, Cory R Nicholas, Joe Shuga, Siyuan John Liu, Michael C Oldham, Aaron Diaz,[...]. Cell 2015
408
9

Development and evolution of the human neocortex.
Jan H Lui, David V Hansen, Arnold R Kriegstein. Cell 2011
738
9

Radial glia require PDGFD-PDGFRβ signalling in human but not mouse neocortex.
Jan H Lui, Tomasz J Nowakowski, Alex A Pollen, Ashkan Javaherian, Arnold R Kriegstein, Michael C Oldham. Nature 2014
104
9

Neural induction, the default model and embryonic stem cells.
Ignacio Muñoz-Sanjuán, Ali H Brivanlou. Nat Rev Neurosci 2002
405
9

Neurogenic radial glia in the outer subventricular zone of human neocortex.
David V Hansen, Jan H Lui, Philip R L Parker, Arnold R Kriegstein. Nature 2010
774
9

Cortical neurons arise in symmetric and asymmetric division zones and migrate through specific phases.
Stephen C Noctor, Verónica Martínez-Cerdeño, Lidija Ivic, Arnold R Kriegstein. Nat Neurosci 2004
9

Intermediate neuronal progenitors (basal progenitors) produce pyramidal-projection neurons for all layers of cerebral cortex.
Tom Kowalczyk, Adria Pontious, Chris Englund, Ray A M Daza, Francesco Bedogni, Rebecca Hodge, Alessio Attardo, Chris Bell, Wieland B Huttner, Robert F Hevner. Cereb Cortex 2009
285
9

Comprehensive qPCR profiling of gene expression in single neuronal cells.
Ami Citri, Zhiping P Pang, Thomas C Südhof, Marius Wernig, Robert C Malenka. Nat Protoc 2011
103
9


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.