A citation-based method for searching scientific literature

Juyeong Hong, Ji Hoon Lee, In Kwon Chung. J Cell Sci 2016
Times Cited: 10







List of co-cited articles
105 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Eukaryotic rRNA Modification by Yeast 5-Methylcytosine-Methyltransferases and Human Proliferation-Associated Antigen p120.
Gabrielle Bourgeois, Michel Ney, Imre Gaspar, Christelle Aigueperse, Matthias Schaefer, Stefanie Kellner, Mark Helm, Yuri Motorin. PLoS One 2015
46
50

5-methylcytosine promotes mRNA export - NSUN2 as the methyltransferase and ALYREF as an m5C reader.
Xin Yang, Ying Yang, Bao-Fa Sun, Yu-Sheng Chen, Jia-Wei Xu, Wei-Yi Lai, Ang Li, Xing Wang, Devi Prasad Bhattarai, Wen Xiao,[...]. Cell Res 2017
278
50

Widespread occurrence of 5-methylcytosine in human coding and non-coding RNA.
Jeffrey E Squires, Hardip R Patel, Marco Nousch, Tennille Sibbritt, David T Humphreys, Brian J Parker, Catherine M Suter, Thomas Preiss. Nucleic Acids Res 2012
495
40


RNA cytosine methylation by Dnmt2 and NSun2 promotes tRNA stability and protein synthesis.
Francesca Tuorto, Reinhard Liebers, Tanja Musch, Matthias Schaefer, Sarah Hofmann, Stefanie Kellner, Michaela Frye, Mark Helm, Georg Stoecklin, Frank Lyko. Nat Struct Mol Biol 2012
283
40

NSun2-mediated cytosine-5 methylation of vault noncoding RNA determines its processing into regulatory small RNAs.
Shobbir Hussain, Abdulrahim A Sajini, Sandra Blanco, Sabine Dietmann, Patrick Lombard, Yoichiro Sugimoto, Maike Paramor, Joseph G Gleeson, Duncan T Odom, Jernej Ule,[...]. Cell Rep 2013
292
40

NSUN4 is a dual function mitochondrial protein required for both methylation of 12S rRNA and coordination of mitoribosomal assembly.
Metodi Dimitrov Metodiev, Henrik Spåhr, Paola Loguercio Polosa, Caroline Meharg, Christian Becker, Janine Altmueller, Bianca Habermann, Nils-Göran Larsson, Benedetta Ruzzenente. PLoS Genet 2014
144
40

Methylation of ribosomal RNA by NSUN5 is a conserved mechanism modulating organismal lifespan.
Markus Schosserer, Nadege Minois, Tina B Angerer, Manuela Amring, Hanna Dellago, Eva Harreither, Alfonso Calle-Perez, Andreas Pircher, Matthias Peter Gerstl, Sigrid Pfeifenberger,[...]. Nat Commun 2015
126
40

Frequent increased gene copy number and high protein expression of tRNA (cytosine-5-)-methyltransferase (NSUN2) in human cancers.
Mayumi Okamoto, Sumi Hirata, Sunao Sato, Satomi Koga, Mikiko Fujii, Guangying Qi, Ikuko Ogawa, Takashi Takata, Fumio Shimamoto, Masaaki Tatsuka. DNA Cell Biol 2012
57
30

Mechanism and biological role of Dnmt2 in Nucleic Acid Methylation.
Albert Jeltsch, Ann Ehrenhofer-Murray, Tomasz P Jurkowski, Frank Lyko, Gunter Reuter, Serge Ankri, Wolfgang Nellen, Matthias Schaefer, Mark Helm. RNA Biol 2017
76
30


RNA methylation by Dnmt2 protects transfer RNAs against stress-induced cleavage.
Matthias Schaefer, Tim Pollex, Katharina Hanna, Francesca Tuorto, Madeleine Meusburger, Mark Helm, Frank Lyko. Genes Dev 2010
400
30

RNA cytosine methylation and methyltransferases mediate chromatin organization and 5-azacytidine response and resistance in leukaemia.
Jason X Cheng, Li Chen, Yuan Li, Adam Cloe, Ming Yue, Jiangbo Wei, Kenneth A Watanabe, Jamile M Shammo, John Anastasi, Qingxi J Shen,[...]. Nat Commun 2018
53
30

Nop2 is expressed during proliferation of neural stem cells and in adult mouse and human brain.
Nina Kosi, Ivan Alić, Matea Kolačević, Nina Vrsaljko, Nataša Jovanov Milošević, Margarita Sobol, Anatoly Philimonenko, Pavel Hozák, Srećko Gajović, Roland Pochet,[...]. Brain Res 2015
14
30

Single-nucleotide-resolution mapping of m6A and m6Am throughout the transcriptome.
Bastian Linder, Anya V Grozhik, Anthony O Olarerin-George, Cem Meydan, Christopher E Mason, Samie R Jaffrey. Nat Methods 2015
620
30

ALKBH5 is a mammalian RNA demethylase that impacts RNA metabolism and mouse fertility.
Guanqun Zheng, John Arne Dahl, Yamei Niu, Peter Fedorcsak, Chun-Min Huang, Charles J Li, Cathrine B Vågbø, Yue Shi, Wen-Ling Wang, Shu-Hui Song,[...]. Mol Cell 2013
30

Identification of methylated nucleosides in messenger RNA from Novikoff hepatoma cells.
R Desrosiers, K Friderici, F Rottman. Proc Natl Acad Sci U S A 1974
752
30

Transcriptome-Wide Mapping of RNA 5-Methylcytosine in Arabidopsis mRNAs and Noncoding RNAs.
Rakesh David, Alice Burgess, Brian Parker, Jun Li, Kalinya Pulsford, Tennille Sibbritt, Thomas Preiss, Iain Robert Searle. Plant Cell 2017
97
30

Long non-coding RNAs as targets for cytosine methylation.
Thomas Amort, Marie F Soulière, Alexandra Wille, Xi-Yu Jia, Heidi Fiegl, Hildegard Wörle, Ronald Micura, Alexandra Lusser. RNA Biol 2013
91
30

Topology of the human and mouse m6A RNA methylomes revealed by m6A-seq.
Dan Dominissini, Sharon Moshitch-Moshkovitz, Schraga Schwartz, Mali Salmon-Divon, Lior Ungar, Sivan Osenberg, Karen Cesarkas, Jasmine Jacob-Hirsch, Ninette Amariglio, Martin Kupiec,[...]. Nature 2012
30

NSUN2-Mediated m5C Methylation and METTL3/METTL14-Mediated m6A Methylation Cooperatively Enhance p21 Translation.
Qiu Li, Xiu Li, Hao Tang, Bin Jiang, Yali Dou, Myriam Gorospe, Wengong Wang. J Cell Biochem 2017
80
30

5-methylcytosine promotes pathogenesis of bladder cancer through stabilizing mRNAs.
Xin Chen, Ang Li, Bao-Fa Sun, Ying Yang, Ya-Nan Han, Xun Yuan, Ri-Xin Chen, Wen-Su Wei, Yanchao Liu, Chun-Chun Gao,[...]. Nat Cell Biol 2019
120
30

The RNA modification landscape in human disease.
Nicky Jonkhout, Julia Tran, Martin A Smith, Nicole Schonrock, John S Mattick, Eva Maria Novoa. RNA 2017
160
30

Loss of 5-methylcytosine alters the biogenesis of vault-derived small RNAs to coordinate epidermal differentiation.
Abdulrahim A Sajini, Nila Roy Choudhury, Rebecca E Wagner, Susanne Bornelöv, Tommaso Selmi, Christos Spanos, Sabine Dietmann, Juri Rappsilber, Gracjan Michlewski, Michaela Frye. Nat Commun 2019
30
30

Methylation of tRNAAsp by the DNA methyltransferase homolog Dnmt2.
Mary Grace Goll, Finn Kirpekar, Keith A Maggert, Jeffrey A Yoder, Chih-Lin Hsieh, Xiaoyu Zhang, Kent G Golic, Steven E Jacobsen, Timothy H Bestor. Science 2006
623
30

NSUN6 is a human RNA methyltransferase that catalyzes formation of m5C72 in specific tRNAs.
Sara Haag, Ahmed S Warda, Jens Kretschmer, Manuel A Günnigmann, Claudia Höbartner, Markus T Bohnsack. RNA 2015
80
30

Deficient methylation and formylation of mt-tRNA(Met) wobble cytosine in a patient carrying mutations in NSUN3.
Lindsey Van Haute, Sabine Dietmann, Laura Kremer, Shobbir Hussain, Sarah F Pearce, Christopher A Powell, Joanna Rorbach, Rebecca Lantaff, Sandra Blanco, Sascha Sauer,[...]. Nat Commun 2016
107
30

mRNA methylation by NSUN2 in cell proliferation.
Wengong Wang. Wiley Interdiscip Rev RNA 2016
15
30

5-methylcytosine in RNA: detection, enzymatic formation and biological functions.
Yuri Motorin, Frank Lyko, Mark Helm. Nucleic Acids Res 2010
189
30

How cells get the message: dynamic assembly and function of mRNA-protein complexes.
Michaela Müller-McNicoll, Karla M Neugebauer. Nat Rev Genet 2013
237
20

NCL1, a novel gene for a non-essential nuclear protein in Saccharomyces cerevisiae.
P Wu, J S Brockenbrough, M R Paddy, J P Aris. Gene 1998
43
20

Somatic cancer mutations in the DNMT2 tRNA methyltransferase alter its catalytic properties.
Winfried Elhardt, Raghuvaran Shanmugam, Tomasz P Jurkowski, Albert Jeltsch. Biochimie 2015
24
20

Identification of human tRNA:m5C methyltransferase catalysing intron-dependent m5C formation in the first position of the anticodon of the pre-tRNA Leu (CAA).
Bartosz Brzezicha, Marcin Schmidt, Izabela Makalowska, Artur Jarmolowski, Joanna Pienkowska, Zofia Szweykowska-Kulinska. Nucleic Acids Res 2006
113
20

tRNA modifying enzymes, NSUN2 and METTL1, determine sensitivity to 5-fluorouracil in HeLa cells.
Mayumi Okamoto, Mamoru Fujiwara, Masato Hori, Kaoru Okada, Futoshi Yazama, Hiroaki Konishi, Yegui Xiao, Guangying Qi, Fumio Shimamoto, Takahide Ota,[...]. PLoS Genet 2014
55
20

Post-transcriptional gene regulation by mRNA modifications.
Boxuan Simen Zhao, Ian A Roundtree, Chuan He. Nat Rev Mol Cell Biol 2017
701
20

The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.
Alexander G Baltz, Mathias Munschauer, Björn Schwanhäusser, Alexandra Vasile, Yasuhiro Murakawa, Markus Schueler, Noah Youngs, Duncan Penfold-Brown, Kevin Drew, Miha Milek,[...]. Mol Cell 2012
732
20

Azacytidine inhibits RNA methylation at DNMT2 target sites in human cancer cell lines.
Matthias Schaefer, Sabine Hagemann, Katharina Hanna, Frank Lyko. Cancer Res 2009
109
20

Inhibition of telomerase RNA decay rescues telomerase deficiency caused by dyskerin or PARN defects.
Siddharth Shukla, Jens C Schmidt, Katherine C Goldfarb, Thomas R Cech, Roy Parker. Nat Struct Mol Biol 2016
64
20

Arabidopsis POT1 associates with the telomerase RNP and is required for telomere maintenance.
Yulia V Surovtseva, Eugene V Shakirov, Laurent Vespa, Nathan Osbun, Xiangyu Song, Dorothy E Shippen. EMBO J 2007
64
20

Telomerase-independent regulation of ATR by human telomerase RNA.
Martijn Kedde, Carlos le Sage, Anja Duursma, Eitan Zlotorynski, Bart van Leeuwen, Wouter Nijkamp, Roderick Beijersbergen, Reuven Agami. J Biol Chem 2006
55
20

Architecture of human telomerase RNA.
Qi Zhang, Nak-Kyoon Kim, Juli Feigon. Proc Natl Acad Sci U S A 2011
87
20

Conservation of tRNA and rRNA 5-methylcytosine in the kingdom Plantae.
Alice Louise Burgess, Rakesh David, Iain Robert Searle. BMC Plant Biol 2015
58
20

Epitranscriptomic Addition of m5C to HIV-1 Transcripts Regulates Viral Gene Expression.
David G Courtney, Kevin Tsai, Hal P Bogerd, Edward M Kennedy, Brittany A Law, Ann Emery, Ronald Swanstrom, Christopher L Holley, Bryan R Cullen. Cell Host Microbe 2019
46
20

Dynamic RNA Modifications in Gene Expression Regulation.
Ian A Roundtree, Molly E Evans, Tao Pan, Chuan He. Cell 2017
951
20

Role of RNA methyltransferases in tissue renewal and pathology.
Sandra Blanco, Michaela Frye. Curr Opin Cell Biol 2014
64
20

m6A Demethylase ALKBH5 Maintains Tumorigenicity of Glioblastoma Stem-like Cells by Sustaining FOXM1 Expression and Cell Proliferation Program.
Sicong Zhang, Boxuan Simen Zhao, Aidong Zhou, Kangyu Lin, Shaoping Zheng, Zhike Lu, Yaohui Chen, Erik P Sulman, Keping Xie, Oliver Bögler,[...]. Cancer Cell 2017
613
20

Hypoxia induces the breast cancer stem cell phenotype by HIF-dependent and ALKBH5-mediated m⁶A-demethylation of NANOG mRNA.
Chuanzhao Zhang, Debangshu Samanta, Haiquan Lu, John W Bullen, Huimin Zhang, Ivan Chen, Xiaoshun He, Gregg L Semenza. Proc Natl Acad Sci U S A 2016
481
20

A METTL3-METTL14 complex mediates mammalian nuclear RNA N6-adenosine methylation.
Jianzhao Liu, Yanan Yue, Dali Han, Xiao Wang, Ye Fu, Liang Zhang, Guifang Jia, Miao Yu, Zhike Lu, Xin Deng,[...]. Nat Chem Biol 2014
20


Structural basis for selective binding of m6A RNA by the YTHDC1 YTH domain.
Chao Xu, Xiao Wang, Ke Liu, Ian A Roundtree, Wolfram Tempel, Yanjun Li, Zhike Lu, Chuan He, Jinrong Min. Nat Chem Biol 2014
325
20


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.