A citation-based method for searching scientific literature

Tao P Wu, Tao Wang, Matthew G Seetin, Yongquan Lai, Shijia Zhu, Kaixuan Lin, Yifei Liu, Stephanie D Byrum, Samuel G Mackintosh, Mei Zhong, Alan Tackett, Guilin Wang, Lawrence S Hon, Gang Fang, James A Swenberg, Andrew Z Xiao. Nature 2016
Times Cited: 295







List of co-cited articles
918 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


N6-Methyladenine DNA Modification in the Human Genome.
Chuan-Le Xiao, Song Zhu, Minghui He, De Chen, Qian Zhang, Ying Chen, Guoliang Yu, Jinbao Liu, Shang-Qian Xie, Feng Luo,[...]. Mol Cell 2018
179
49

DNA Methylation on N6-Adenine in C. elegans.
Eric Lieberman Greer, Mario Andres Blanco, Lei Gu, Erdem Sendinc, Jianzhao Liu, David Aristizábal-Corrales, Chih-Hung Hsu, L Aravind, Chuan He, Yang Shi. Cell 2015
313
41

N6-methyladenine DNA modification in Drosophila.
Guoqiang Zhang, Hua Huang, Di Liu, Ying Cheng, Xiaoling Liu, Wenxin Zhang, Ruichuan Yin, Dapeng Zhang, Peng Zhang, Jianzhao Liu,[...]. Cell 2015
300
39

N6-methyladenine DNA Modification in Glioblastoma.
Qi Xie, Tao P Wu, Ryan C Gimple, Zheng Li, Briana C Prager, Qiulian Wu, Yang Yu, Pengcheng Wang, Yinsheng Wang, David U Gorkin,[...]. Cell 2018
105
36

N6-methyldeoxyadenosine marks active transcription start sites in Chlamydomonas.
Ye Fu, Guan-Zheng Luo, Kai Chen, Xin Deng, Miao Yu, Dali Han, Ziyang Hao, Jianzhao Liu, Xingyu Lu, Louis C Dore,[...]. Cell 2015
227
32

Abundant DNA 6mA methylation during early embryogenesis of zebrafish and pig.
Jianzhao Liu, Yuanxiang Zhu, Guan-Zheng Luo, Xinxia Wang, Yanan Yue, Xiaona Wang, Xin Zong, Kai Chen, Hang Yin, Ye Fu,[...]. Nat Commun 2016
106
29

Identification of methylated deoxyadenosines in vertebrates reveals diversity in DNA modifications.
Magdalena J Koziol, Charles R Bradshaw, George E Allen, Ana S H Costa, Christian Frezza, John B Gurdon. Nat Struct Mol Biol 2016
119
28

DNA N6-methyladenine is dynamically regulated in the mouse brain following environmental stress.
Bing Yao, Ying Cheng, Zhiqin Wang, Yujing Li, Li Chen, Luoxiu Huang, Wenxin Zhang, Dahua Chen, Hao Wu, Beisha Tang,[...]. Nat Commun 2017
87
25

DNA N6-Adenine Methylation in Arabidopsis thaliana.
Zhe Liang, Lisha Shen, Xuean Cui, Shengjie Bao, Yuke Geng, Guoliang Yu, Fan Liang, Shang Xie, Tiegang Lu, Xiaofeng Gu,[...]. Dev Cell 2018
81
25

DNA N(6)-methyladenine: a new epigenetic mark in eukaryotes?
Guan-Zheng Luo, Mario Andres Blanco, Eric Lieberman Greer, Chuan He, Yang Shi. Nat Rev Mol Cell Biol 2015
110
21

Widespread adenine N6-methylation of active genes in fungi.
Stephen J Mondo, Richard O Dannebaum, Rita C Kuo, Katherine B Louie, Adam J Bewick, Kurt LaButti, Sajeet Haridas, Alan Kuo, Asaf Salamov, Steven R Ahrendt,[...]. Nat Genet 2017
135
21

Identification and analysis of adenine N6-methylation sites in the rice genome.
Chao Zhou, Changshi Wang, Hongbo Liu, Qiangwei Zhou, Qian Liu, Yan Guo, Ting Peng, Jiaming Song, Jianwei Zhang, Lingling Chen,[...]. Nat Plants 2018
65
29

Quantitative LC-MS Provides No Evidence for m6 dA or m4 dC in the Genome of Mouse Embryonic Stem Cells and Tissues.
Sarah Schiffers, Charlotte Ebert, René Rahimoff, Olesea Kosmatchev, Jessica Steinbacher, Alexandra-Viola Bohne, Fabio Spada, Stylianos Michalakis, Jörg Nickelsen, Markus Müller,[...]. Angew Chem Int Ed Engl 2017
55
30

N6-methyl-adenine: an epigenetic signal for DNA-protein interactions.
Didier Wion, Josep Casadesús. Nat Rev Microbiol 2006
318
16

An Adversarial DNA N6-Methyladenine-Sensor Network Preserves Polycomb Silencing.
Soo-Mi Kweon, Yibu Chen, Eugene Moon, Kotryna Kvederaviciutė, Saulius Klimasauskas, Douglas E Feldman. Mol Cell 2019
45
33

Direct detection of DNA methylation during single-molecule, real-time sequencing.
Benjamin A Flusberg, Dale R Webster, Jessica H Lee, Kevin J Travers, Eric C Olivares, Tyson A Clark, Jonas Korlach, Stephen W Turner. Nat Methods 2010
742
15

Sources of artifact in measurements of 6mA and 4mC abundance in eukaryotic genomic DNA.
Zach K O'Brown, Konstantinos Boulias, Jie Wang, Simon Yuan Wang, Natasha M O'Brown, Ziyang Hao, Hiroki Shibuya, Paul-Enguerrand Fady, Yang Shi, Chuan He,[...]. BMC Genomics 2019
37
40

No evidence for DNA N 6-methyladenine in mammals.
Karolos Douvlataniotis, Maike Bensberg, Antonio Lentini, Björn Gylemo, Colm E Nestor. Sci Adv 2020
27
48

N6-Deoxyadenosine Methylation in Mammalian Mitochondrial DNA.
Ziyang Hao, Tong Wu, Xiaolong Cui, Pingping Zhu, Caiping Tan, Xiaoyang Dou, Kai-Wen Hsu, Yueh-Te Lin, Pei-Hua Peng, Li-Sheng Zhang,[...]. Mol Cell 2020
43
30


Tet proteins can convert 5-methylcytosine to 5-formylcytosine and 5-carboxylcytosine.
Shinsuke Ito, Li Shen, Qing Dai, Susan C Wu, Leonard B Collins, James A Swenberg, Chuan He, Yi Zhang. Science 2011
12

DNA methylation: roles in mammalian development.
Zachary D Smith, Alexander Meissner. Nat Rev Genet 2013
12

Conversion of 5-methylcytosine to 5-hydroxymethylcytosine in mammalian DNA by MLL partner TET1.
Mamta Tahiliani, Kian Peng Koh, Yinghua Shen, William A Pastor, Hozefa Bandukwala, Yevgeny Brudno, Suneet Agarwal, Lakshminarayan M Iyer, David R Liu, L Aravind,[...]. Science 2009
12

Comprehensive analysis of mRNA methylation reveals enrichment in 3' UTRs and near stop codons.
Kate D Meyer, Yogesh Saletore, Paul Zumbo, Olivier Elemento, Christopher E Mason, Samie R Jaffrey. Cell 2012
12

Topology of the human and mouse m6A RNA methylomes revealed by m6A-seq.
Dan Dominissini, Sharon Moshitch-Moshkovitz, Schraga Schwartz, Mali Salmon-Divon, Lior Ungar, Sivan Osenberg, Karen Cesarkas, Jasmine Jacob-Hirsch, Ninette Amariglio, Martin Kupiec,[...]. Nature 2012
11

Mapping and characterizing N6-methyladenine in eukaryotic genomes using single-molecule real-time sequencing.
Shijia Zhu, John Beaulaurier, Gintaras Deikus, Tao P Wu, Maya Strahl, Ziyang Hao, Guanzheng Luo, James A Gregory, Andrew Chess, Chuan He,[...]. Genome Res 2018
34
32


N6-methyladenosine in nuclear RNA is a major substrate of the obesity-associated FTO.
Guifang Jia, Ye Fu, Xu Zhao, Qing Dai, Guanqun Zheng, Ying Yang, Chengqi Yi, Tomas Lindahl, Tao Pan, Yun-Gui Yang,[...]. Nat Chem Biol 2011
11

N6-methyladenine: the other methylated base of DNA.
David Ratel, Jean-Luc Ravanat, François Berger, Didier Wion. Bioessays 2006
131
11

Mammalian ALKBH1 serves as an N6-mA demethylase of unpairing DNA.
Min Zhang, Shumin Yang, Raman Nelakanti, Wentao Zhao, Gaochao Liu, Zheng Li, Xiaohui Liu, Tao Wu, Andrew Xiao, Haitao Li. Cell Res 2020
19
57


ALKBH5 is a mammalian RNA demethylase that impacts RNA metabolism and mouse fertility.
Guanqun Zheng, John Arne Dahl, Yamei Niu, Peter Fedorcsak, Chun-Min Huang, Charles J Li, Cathrine B Vågbø, Yue Shi, Wen-Ling Wang, Shu-Hui Song,[...]. Mol Cell 2013
10

The diverse roles of DNA methylation in mammalian development and disease.
Maxim V C Greenberg, Deborah Bourc'his. Nat Rev Mol Cell Biol 2019
398
10

N6-methyladenine in DNA antagonizes SATB1 in early development.
Zheng Li, Shuai Zhao, Raman V Nelakanti, Kaixuan Lin, Tao P Wu, Myles H Alderman, Cheng Guo, Pengcheng Wang, Min Zhang, Wang Min,[...]. Nature 2020
13
76

N6-methyldeoxyadenine is a transgenerational epigenetic signal for mitochondrial stress adaptation.
Chengchuan Ma, Rong Niu, Tianxiao Huang, Li-Wa Shao, Yong Peng, Wanqiu Ding, Ye Wang, Guifang Jia, Chuan He, Chuan-Yun Li,[...]. Nat Cell Biol 2019
58
15

DNA N6-methyladenine demethylase ALKBH1 enhances osteogenic differentiation of human MSCs.
Chenchen Zhou, Yuting Liu, Xiaobing Li, Jing Zou, Shujuan Zou. Bone Res 2016
28
32

ALKBH1 is an RNA dioxygenase responsible for cytoplasmic and mitochondrial tRNA modifications.
Layla Kawarada, Takeo Suzuki, Takayuki Ohira, Shoji Hirata, Kenjyo Miyauchi, Tsutomu Suzuki. Nucleic Acids Res 2017
75
12

ALKBH1-Mediated tRNA Demethylation Regulates Translation.
Fange Liu, Wesley Clark, Guanzheng Luo, Xiaoyun Wang, Ye Fu, Jiangbo Wei, Xiao Wang, Ziyang Hao, Qing Dai, Guanqun Zheng,[...]. Cell 2016
147
9

ALKBH1 is a histone H2A dioxygenase involved in neural differentiation.
Rune Ougland, David Lando, Ida Jonson, John A Dahl, Marivi Nabong Moen, Line M Nordstrand, Torbjørn Rognes, Jeannie T Lee, Arne Klungland, Tony Kouzarides,[...]. Stem Cells 2012
71
12

Tet-mediated formation of 5-carboxylcytosine and its excision by TDG in mammalian DNA.
Yu-Fei He, Bin-Zhong Li, Zheng Li, Peng Liu, Yang Wang, Qingyu Tang, Jianping Ding, Yingying Jia, Zhangcheng Chen, Lin Li,[...]. Science 2011
9

The origin of genomic N6-methyl-deoxyadenosine in mammalian cells.
Michael U Musheev, Anne Baumgärtner, Laura Krebs, Christof Niehrs. Nat Chem Biol 2020
18
50

i6mA-Pred: identifying DNA N6-methyladenine sites in the rice genome.
Wei Chen, Hao Lv, Fulei Nie, Hao Lin. Bioinformatics 2019
92
8

N 6-Hydroxymethyladenine: a hydroxylation derivative of N6-methyladenine in genomic DNA of mammals.
Jun Xiong, Tian-Tian Ye, Cheng-Jie Ma, Qing-Yun Cheng, Bi-Feng Yuan, Yu-Qi Feng. Nucleic Acids Res 2019
31
25

Identification of a DNA N6-Adenine Methyltransferase Complex and Its Impact on Chromatin Organization.
Leslie Y Beh, Galia T Debelouchina, Derek M Clay, Robert E Thompson, Kelsi A Lindblad, Elizabeth R Hutton, John R Bracht, Robert P Sebra, Tom W Muir, Laura F Landweber. Cell 2019
25
32

N6-Methyladenine DNA Methylation in Japonica and Indica Rice Genomes and Its Association with Gene Expression, Plant Development, and Stress Responses.
Qian Zhang, Zhe Liang, Xuean Cui, Changmian Ji, Yun Li, Pingxian Zhang, Jingrong Liu, Adeel Riaz, Pu Yao, Min Liu,[...]. Mol Plant 2018
46
17


A METTL3-METTL14 complex mediates mammalian nuclear RNA N6-adenosine methylation.
Jianzhao Liu, Yanan Yue, Dali Han, Xiao Wang, Ye Fu, Liang Zhang, Guifang Jia, Miao Yu, Zhike Lu, Xin Deng,[...]. Nat Chem Biol 2014
8

NSUN3 and ABH1 modify the wobble position of mt-tRNAMet to expand codon recognition in mitochondrial translation.
Sara Haag, Katherine E Sloan, Namit Ranjan, Ahmed S Warda, Jens Kretschmer, Charlotte Blessing, Benedikt Hübner, Jan Seikowski, Sven Dennerlein, Peter Rehling,[...]. EMBO J 2016
102
8

Dynamic RNA Modifications in Gene Expression Regulation.
Ian A Roundtree, Molly E Evans, Tao Pan, Chuan He. Cell 2017
923
8

Characterization of eukaryotic DNA N(6)-methyladenine by a highly sensitive restriction enzyme-assisted sequencing.
Guan-Zheng Luo, Fang Wang, Xiaocheng Weng, Kai Chen, Ziyang Hao, Miao Yu, Xin Deng, Jianzhao Liu, Chuan He. Nat Commun 2016
50
16


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.