A citation-based method for searching scientific literature

Marjolein J A Weerts, Anieta M Sieuwerts, Marcel Smid, Maxime P Look, John A Foekens, Stefan Sleijfer, John W M Martens. Oncotarget 2016
Times Cited: 26







List of co-cited articles
229 articles co-cited >1



Times Cited
  Times     Co-cited
Similarity


Mitochondrial DNA copy number variation across human cancers.
Ed Reznik, Martin L Miller, Yasin Şenbabaoğlu, Nadeem Riaz, Judy Sarungbam, Satish K Tickoo, Hikmat A Al-Ahmadie, William Lee, Venkatraman E Seshan, A Ari Hakimi,[...]. Elife 2016
257
53

Tumor-specific changes in mtDNA content in human cancer.
Elizabeth Mambo, Aditi Chatterjee, Mingzhao Xing, Giovanni Tallini, Bryan R Haugen, Sai-Ching J Yeung, Saraswati Sukumar, David Sidransky. Int J Cancer 2005
136
30

Origins and functional consequences of somatic mitochondrial DNA mutations in human cancer.
Young Seok Ju, Ludmil B Alexandrov, Moritz Gerstung, Inigo Martincorena, Serena Nik-Zainal, Manasa Ramakrishna, Helen R Davies, Elli Papaemmanuil, Gunes Gundem, Adam Shlien,[...]. Elife 2014
239
30

Spectrum of somatic mitochondrial mutations in five cancers.
Tatianna C Larman, Steven R DePalma, Angela G Hadjipanayis, Alexei Protopopov, Jianhua Zhang, Stacey B Gabriel, Lynda Chin, Christine E Seidman, Raju Kucherlapati, J G Seidman. Proc Natl Acad Sci U S A 2012
155
30

On the origin of cancer cells.
O WARBURG. Science 1956
26

Reduced mitochondrial DNA copy number is correlated with tumor progression and prognosis in Chinese breast cancer patients.
Man Yu, Yunli Zhou, Yurong Shi, Liansheng Ning, Yi Yang, Xiyin Wei, Ning Zhang, Xishan Hao, Ruifang Niu. IUBMB Life 2007
185
26

Mitochondrial DNA content in paired normal and cancerous breast tissue samples from patients with breast cancer.
Alex Xiu-Cheng Fan, Ramin Radpour, Mahdi Montazer Haghighi, Corina Kohler, Peng Xia, Sinuhe Hahn, Wolfgang Holzgreve, Xiao Yan Zhong. J Cancer Res Clin Oncol 2009
57
26


Simultaneous DNA and RNA Mapping of Somatic Mitochondrial Mutations across Diverse Human Cancers.
James B Stewart, Babak Alaei-Mahabadi, Radhakrishnan Sabarinathan, Tore Samuelsson, Jan Gorodkin, Claes M Gustafsson, Erik Larsson. PLoS Genet 2015
79
26

Mitochondrial DNA content varies with pathological characteristics of breast cancer.
Ren-Kui Bai, Julia Chang, Kun-Tu Yeh, Mary Ann Lou, Jyh-Feng Lu, Duan-Jun Tan, Hao Liu, Lee-Jun C Wong. J Oncol 2011
46
23

Mitochondrial DNA content as a potential marker to predict response to anthracycline in breast cancer patients.
Chih-Wei Hsu, Pen-Hui Yin, Hsin-Chen Lee, Chin-Wen Chi, Ling-Ming Tseng. Breast J 2010
35
23


ROS-generating mitochondrial DNA mutations can regulate tumor cell metastasis.
Kaori Ishikawa, Keizo Takenaga, Miho Akimoto, Nobuko Koshikawa, Aya Yamaguchi, Hirotake Imanishi, Kazuto Nakada, Yoshio Honma, Jun-Ichi Hayashi. Science 2008
937
19

High copy number of mitochondrial DNA predicts poor prognosis in patients with advanced stage colon cancer.
Yun Wang, Shuixiang He, Xingmei Zhu, Wei Qiao, Juan Zhang. Int J Biol Markers 2016
22
22

Organization and dynamics of human mitochondrial DNA.
Frédéric Legros, Florence Malka, Paule Frachon, Anne Lombès, Manuel Rojo. J Cell Sci 2004
262
19

Methylation profile of TP53 regulatory pathway and mtDNA alterations in breast cancer patients lacking TP53 mutations.
Zeinab Barekati, Ramin Radpour, Corina Kohler, Bei Zhang, Paolo Toniolo, Per Lenner, Qing Lv, Hong Zheng, Xiao Yan Zhong. Hum Mol Genet 2010
35
19

Mitochondrial DNA mutations and mitochondrial DNA depletion in breast cancer.
Ling-Ming Tseng, Pen-Hui Yin, Chin-Wen Chi, Chih-Yi Hsu, Chew-Wun Wu, Liang-Ming Lee, Yau-Huei Wei, Hsin-Chen Lee. Genes Chromosomes Cancer 2006
204
19

Heteroplasmic mitochondrial DNA mutations in normal and tumour cells.
Yiping He, Jian Wu, Devin C Dressman, Christine Iacobuzio-Donahue, Sanford D Markowitz, Victor E Velculescu, Luis A Diaz, Kenneth W Kinzler, Bert Vogelstein, Nickolas Papadopoulos. Nature 2010
376
19

Recurrent tissue-specific mtDNA mutations are common in humans.
David C Samuels, Chun Li, Bingshan Li, Zhuo Song, Eric Torstenson, Hayley Boyd Clay, Antonis Rokas, Tricia A Thornton-Wells, Jason H Moore, Tia M Hughes,[...]. PLoS Genet 2013
99
19

Hallmarks of cancer: the next generation.
Douglas Hanahan, Robert A Weinberg. Cell 2011
19

Low Tumor Mitochondrial DNA Content Is Associated with Better Outcome in Breast Cancer Patients Receiving Anthracycline-Based Chemotherapy.
Marjolein J A Weerts, Antoinette Hollestelle, Anieta M Sieuwerts, John A Foekens, Stefan Sleijfer, John W M Martens. Clin Cancer Res 2017
12
41


Mitochondrial DNA copy number in colorectal cancer: between tissue comparisons, clinicopathological characteristics and survival.
Frits H M van Osch, An M Voets, Leo J Schouten, Ralph W H Gottschalk, Colinda C J M Simons, Manon van Engeland, Marjolein H F M Lentjes, Piet A van den Brandt, Hubert J M Smeets, Matty P Weijenberg. Carcinogenesis 2015
29
15


High frequency of homoplasmic mitochondrial DNA mutations in human tumors can be explained without selection.
H A Coller, K Khrapko, N D Bodyak, E Nekhaeva, P Herrero-Jimenez, W G Thilly. Nat Genet 2001
223
15

Mitochondrial DNA Copy Number in Peripheral Blood Cells and Risk of Developing Breast Cancer.
Alina Lemnrau, Mark N Brook, Olivia Fletcher, Penny Coulson, Katarzyna Tomczyk, Michael Jones, Alan Ashworth, Anthony Swerdlow, Nick Orr, Montserrat Garcia-Closas. Cancer Res 2015
34
15

Progressive tumor features accompany epithelial-mesenchymal transition induced in mitochondrial DNA-depleted cells.
Akihiro Naito, Cody C Cook, Takatsugu Mizumachi, Mian Wang, Cheng-Hui Xie, Teresa T Evans, Thomas Kelly, Masahiro Higuchi. Cancer Sci 2008
60
15

Mitochondrial retrograde signaling induces epithelial-mesenchymal transition and generates breast cancer stem cells.
M Guha, S Srinivasan, G Ruthel, A K Kashina, R P Carstens, A Mendoza, C Khanna, T Van Winkle, N G Avadhani. Oncogene 2014
86
15

Extensive tissue-related and allele-related mtDNA heteroplasmy suggests positive selection for somatic mutations.
Mingkun Li, Roland Schröder, Shengyu Ni, Burkhard Madea, Mark Stoneking. Proc Natl Acad Sci U S A 2015
120
15

Integrative genomics viewer.
James T Robinson, Helga Thorvaldsdóttir, Wendy Winckler, Mitchell Guttman, Eric S Lander, Gad Getz, Jill P Mesirov. Nat Biotechnol 2011
15

The frequency of heteroplasmy in the HVII region of mtDNA differs across tissue types and increases with age.
C D Calloway, R L Reynolds, G L Herrin, W W Anderson. Am J Hum Genet 2000
113
15

Age-Related and Heteroplasmy-Related Variation in Human mtDNA Copy Number.
Manja Wachsmuth, Alexander Hübner, Mingkun Li, Burkhard Madea, Mark Stoneking. PLoS Genet 2016
90
15

Heteroplasmic shifts in tumor mitochondrial genomes reveal tissue-specific signals of relaxed and positive selection.
Sneha Grandhi, Colleen Bosworth, Wesley Maddox, Cole Sensiba, Sara Akhavanfard, Ying Ni, Thomas LaFramboise. Hum Mol Genet 2017
29
15

Tumor-Specific Mitochondrial DNA Variants Are Rarely Detected in Cell-Free DNA.
M J A Weerts, E C Timmermans, A van de Stolpe, R H A M Vossen, S Y Anvar, J A Foekens, S Sleijfer, J W M Martens. Neoplasia 2018
21
19

A mitochondrial switch promotes tumor metastasis.
Paolo E Porporato, Valéry L Payen, Jhudit Pérez-Escuredo, Christophe J De Saedeleer, Pierre Danhier, Tamara Copetti, Suveera Dhup, Morgane Tardy, Thibaut Vazeille, Caroline Bouzin,[...]. Cell Rep 2014
353
11

Mitochondria and cancer.
Douglas C Wallace. Nat Rev Cancer 2012
11

The relationship between altered mitochondrial DNA copy number and cancer risk: a meta-analysis.
Jia Mi, Geng Tian, Shuang Liu, Xianglin Li, Tianhui Ni, Liwei Zhang, Bin Wang. Sci Rep 2015
23
13



High copy number of mitochondrial DNA (mtDNA) predicts good prognosis in glioma patients.
Yanfang Zhang, Yiping Qu, Ke Gao, Qi Yang, Bingyin Shi, Peng Hou, Meiju Ji. Am J Cancer Res 2015
26
11

Association of decreased mitochondrial DNA content with the progression of colorectal cancer.
HaiHong Cui, Ping Huang, ZhiJing Wang, YunXin Zhang, ZhenHua Zhang, Wei Xu, XiaoPeng Wang, Ying Han, XiaoMing Guo. BMC Cancer 2013
52
11


Mitochondrial genome instability and mtDNA depletion in human cancers.
Hsin-Chen Lee, Pen-Hui Yin, Jin-Ching Lin, Cheng-Chung Wu, Chih-Yi Chen, Chew-Wun Wu, Chin-Wen Chi, Tseng-Nip Tam, Yau-Huei Wei. Ann N Y Acad Sci 2005
208
11

How do changes in the mtDNA and mitochondrial dysfunction influence cancer and cancer therapy? Challenges, opportunities and models.
M W van Gisbergen, A M Voets, M H W Starmans, I F M de Coo, R Yadak, R F Hoffmann, P C Boutros, H J M Smeets, L Dubois, P Lambin. Mutat Res Rev Mutat Res 2015
123
11

Mitochondrial DNA mutations in respiratory complex-I in never-smoker lung cancer patients contribute to lung cancer progression and associated with EGFR gene mutation.
Santanu Dasgupta, Ethan Soudry, Nitai Mukhopadhyay, Chunbo Shao, John Yee, Stephan Lam, Wan Lam, Wei Zhang, Adi F Gazdar, Paul B Fisher,[...]. J Cell Physiol 2012
57
11

Performance of mitochondrial DNA mutations detecting early stage cancer.
John P Jakupciak, Samantha Maragh, Maura E Markowitz, Alissa K Greenberg, Mohammad O Hoque, Anirban Maitra, Peter E Barker, Paul D Wagner, William N Rom, Sudhir Srivastava,[...]. BMC Cancer 2008
44
11

Facile detection of mitochondrial DNA mutations in tumors and bodily fluids.
M S Fliss, H Usadel, O L Caballero, L Wu, M R Buta, S M Eleff, J Jen, D Sidransky. Science 2000
640
11

mtDNA mutations increase tumorigenicity in prostate cancer.
John A Petros, Amanda K Baumann, Eduardo Ruiz-Pesini, Mahul B Amin, Carrie Qi Sun, John Hall, SoDug Lim, Muta M Issa, W Dana Flanders, Seyed H Hosseini,[...]. Proc Natl Acad Sci U S A 2005
619
11

Precise determination of mitochondrial DNA copy number in human skeletal and cardiac muscle by a PCR-based assay: lack of change of copy number with age.
Francis J Miller, Franklin L Rosenfeldt, Chunfang Zhang, Anthony W Linnane, Phillip Nagley. Nucleic Acids Res 2003
227
11

MToolBox: a highly automated pipeline for heteroplasmy annotation and prioritization analysis of human mitochondrial variants in high-throughput sequencing.
Claudia Calabrese, Domenico Simone, Maria Angela Diroma, Mariangela Santorsola, Cristiano Guttà, Giuseppe Gasparre, Ernesto Picardi, Graziano Pesole, Marcella Attimonelli. Bioinformatics 2014
122
11


Co-cited is the co-citation frequency, indicating how many articles cite the article together with the query article. Similarity is the co-citation as percentage of the times cited of the query article or the article in the search results, whichever is the lowest. These numbers are calculated for the last 100 citations when articles are cited more than 100 times.